
Microexon ID | Sm_GL377671:447614-447628:+ |
Species | Selaginella moellendorffii | Coordinates | GL377671:447614..447628 |
Microexon Cluster ID | MEP42 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | bHLH-MYC_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Sm_GL377671:447614-447628:+ does not have available information here.
Sm_GL377671:447614-447628:+ does not have available information here.
Microexon DNA seq | AGCGCAGGAATTCAG |
Microexon Amino Acid seq | SAGIQ |
Microexon-tag DNA Seq | ACTGTCAAGCCCATTAACTTCCAGTGTGCGCGACTGGAGCTTGCCAAGAGCGCAGGAATTCAGACAATCGTCTGTGTTCCCACCCGAAACGGAGTTGTGGAGCTGGGA |
Microexon-tag Amino Acid seq | TVKPINFQCARLELAKSAGIQTIVCVPTRNGVVELG |
Transcript ID | Sm.28600.1 |
Gene ID | Sm.28600 |
Gene Name | NA |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 1.6e-51 |
Motif start | 38 |
Motif end | 214 |
Protein seq | >Sm.28600.1 MDFDFSSFLGGPSPDFNPFQEEVGGGGAIQSTFADTALQDKLTLLVDNSSLCCWTYAIFWQLSSADGQMILGWGDGYFST NENSTQRNEAKQFDADQILRRKVLRELHDLCHPEEDLREVEHVTDQEWFYLLSMSWNFPCGEGIPGRAFQFGQHIWICDT VKPINFQCARLELAKSAGIQTIVCVPTRNGVVELGSTEIVNECSRTLQDIRRYFEEEQQPGTFQVADVQQQPQQQPQQQP QQQHHHHQASAYESILLSGPLSSSSSITVNSGMERGAHLNPSLKASYPDKLSSSALGSSTGMEYFYSSDPYDMPSLDSDK ESVPVILPPYSSKSYDDKHFFQLGAPPSNKGGGSIRPGHSNKFQAFVAESSEIVTSMDSKSRRVAEQQQQQQKQAASMTY LREAASKSSGPKPGGMKQQQQQQSETTVAALMNPPRSSIETEQELDSEAEVSFREAADCSLNVVQKPPRKRGRKPANDRE EPLNHVQAERQRREKLNQRFYALRSVVPNVSKMDKASLLEDAIKYIKELRDKVQNLETQMKEMQLHASSASSRHATHAAA AATAAAAAAAATNTNDATRLLGKQSSLATSLSASASASAGGDVLDTQSEVRSRYKEREQQPDVYVHLVGSEALVRVKCPK DSYPVANLLVTLQDELQLQVEHASISSLDRHHLLHTVIVKVPKQASSLSLSLSPTLAFHALALHNISW* |
CDS seq | >Sm.28600.1 ATGGATTTCGATTTCTCGTCCTTTCTAGGGGGTCCTAGCCCCGACTTCAATCCGTTCCAGGAGGAGGTGGGCGGAGGGGG GGCCATCCAGAGCACGTTTGCGGACACGGCGCTGCAGGACAAGCTCACCTTGCTCGTCGACAACTCGTCCCTCTGCTGCT GGACGTATGCAATCTTCTGGCAGCTCTCCAGCGCCGACGGCCAGATGATTCTGGGCTGGGGCGACGGCTACTTCTCCACC AACGAGAACAGTACCCAGCGGAACGAGGCCAAGCAGTTCGATGCCGACCAAATTCTCAGGCGCAAGGTCCTCCGCGAGCT CCACGACCTGTGCCATCCCGAGGAGGACCTCCGAGAGGTGGAGCATGTCACCGACCAGGAGTGGTTCTATCTCCTCTCCA TGTCGTGGAATTTCCCCTGCGGTGAAGGCATTCCAGGGCGGGCGTTCCAGTTTGGGCAGCACATATGGATTTGCGACACT GTCAAGCCCATTAACTTCCAGTGTGCGCGACTGGAGCTTGCCAAGAGCGCAGGAATTCAGACAATCGTCTGTGTTCCCAC CCGAAACGGAGTTGTGGAGCTGGGATCCACCGAAATCGTTAACGAGTGCTCGCGGACACTCCAAGACATAAGGAGATACT TTGAGGAGGAGCAGCAGCCAGGTACATTCCAGGTGGCGGATGTGCAGCAGCAGCCGCAGCAGCAGCCGCAGCAGCAACCG CAGCAACAGCATCATCATCACCAGGCTTCAGCATACGAGAGCATTCTCCTCTCTGGCCCCTTGTCCAGCTCCAGCAGCAT CACCGTCAACTCGGGCATGGAGCGTGGCGCACACCTCAACCCGTCGCTCAAGGCGTCCTACCCGGACAAGCTTAGCTCCT CGGCCCTGGGCAGCAGCACCGGGATGGAGTACTTCTACTCGTCCGACCCTTACGACATGCCAAGCCTGGACAGCGACAAG GAGAGCGTGCCCGTCATCCTGCCCCCGTACTCATCCAAGTCGTACGACGACAAGCACTTTTTCCAGCTCGGGGCACCACC CAGCAACAAAGGTGGTGGGAGCATCAGGCCCGGCCACAGCAACAAGTTCCAGGCCTTTGTAGCGGAGAGTAGTGAGATTG TCACGTCCATGGACTCCAAGAGCCGCAGGGTGGCCGAGCAGCAGCAGCAGCAGCAAAAGCAAGCGGCAAGCATGACGTAC TTGAGGGAGGCAGCCAGCAAGAGCTCGGGTCCCAAGCCAGGGGGCATGAAGCAGCAGCAGCAGCAGCAATCGGAGACGAC GGTGGCAGCTCTGATGAATCCACCGCGCTCCAGCATCGAGACGGAGCAGGAGCTGGACTCGGAAGCGGAGGTGTCGTTTA GAGAAGCGGCAGACTGCAGCCTCAACGTGGTGCAAAAGCCTCCAAGGAAGCGTGGCCGGAAGCCTGCAAACGACCGCGAG GAGCCCTTGAATCACGTCCAGGCGGAGCGGCAACGGCGGGAGAAGCTCAACCAGCGCTTCTACGCGCTGCGCTCGGTGGT TCCAAACGTTTCCAAGATGGACAAAGCATCGCTGCTGGAAGACGCCATCAAGTACATCAAGGAGCTGCGGGACAAGGTCC AGAACTTGGAAACACAGATGAAGGAGATGCAGCTCCACGCGTCGTCGGCGTCGTCTCGTCATGCTACTCATGCTGCCGCT GCTGCTACTGCTGCTGCTGCTGCTGCTGCTGCTACCAACACCAACGATGCGACGAGGCTCCTGGGAAAGCAAAGTAGCCT GGCCACCTCTCTCAGTGCCAGTGCCAGTGCCAGCGCCGGCGGCGATGTGCTGGACACGCAGTCGGAGGTGCGGTCGCGCT ACAAGGAGCGGGAGCAGCAGCCGGATGTCTACGTGCACCTTGTGGGATCGGAGGCACTGGTGCGCGTCAAGTGCCCCAAG GACAGCTACCCCGTCGCCAACCTCCTCGTCACGCTGCAAGACGAGCTCCAGCTCCAGGTGGAGCACGCCAGCATCTCCAG CCTCGACCGCCACCACCTCCTCCACACCGTCATTGTCAAGGTACCAAAGCAAGCAAGCTCTCTCTCTCTCTCTCTCTCGC CCACTCTCGCATTCCATGCGCTTGCCTTACACAATATTTCGTGGTGA |