
Microexon ID | Sm_GL377647:833936-833950:+ |
Species | Selaginella moellendorffii | Coordinates | GL377647:833936..833950 |
Microexon Cluster ID | MEP42 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | bHLH-MYC_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Sm_GL377647:833936-833950:+ does not have available information here.
Transcript ID | EFJ11384 |
Protein ID | EFJ11384 |
Gene ID | SELMODRAFT_158887 |
Gene Name | NA |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 2e-52 |
Motif start | 3 |
Motif end | 179 |
Protein seq | >EFJ11384 MALQHKLTFLVDNSSLCCWTYAIVWQLSSADGQMILSWGDGYFSTNENSTQRNEAKQFDADQILRRKVLRELHDLCHPEE DYREVDHVTDQEWFYLLSMSWNFACGEGIPGRAFQFGQHIWICDTVKPINFQCARLELAKSAGIQTIVCVPTRNGVVELG STEIVNECSRTLQDIRRYFEEEQQQQQSQ* |
CDS seq | >EFJ11384 ATGGCGCTGCAGCACAAGCTCACCTTCCTCGTCGACAACTCGTCCCTCTGCTGCTGGACGTATGCAATCGTCTGGCAGCT CTCCAGCGCCGACGGCCAGATGATTCTGAGCTGGGGCGACGGCTACTTCTCCACCAACGAGAACAGTACCCAGCGGAACG AGGCCAAGCAGTTCGATGCCGACCAAATTCTCAGGCGCAAGGTCCTCCGCGAGCTCCACGACCTGTGCCATCCCGAGGAG GATTATCGAGAGGTGGACCATGTCACCGACCAGGAGTGGTTCTATCTCCTCTCCATGTCGTGGAATTTCGCCTGCGGTGA AGGCATTCCAGGGCGGGCGTTCCAGTTTGGGCAGCACATATGGATTTGCGACACTGTCAAGCCCATTAACTTTCAGTGTG CGCGACTGGAGCTTGCCAAGAGCGCAGGAATTCAGACAATCGTCTGTGTTCCCACCCGAAACGGAGTTGTGGAGCTGGGA TCCACCGAAATCGTTAACGAGTGCTCGCGGACACTCCAAGACATAAGGAGATACTTTGAGGAGGAGCAGCAGCAGCAGCA ATCACAGTAG |
Microexon DNA seq | AGCGCAGGAATTCAG |
Microexon Amino Acid seq | SAGIQ |
Microexon-tag DNA Seq | ACTGTCAAGCCCATTAACTTTCAGTGTGCGCGACTGGAGCTTGCCAAGAGCGCAGGAATTCAGACAATCGTCTGTGTTCCCACCCGAAACGGAGTTGTGGAGCTGGGA |
Microexon-tag Amino Acid seq | TVKPINFQCARLELAKSAGIQTIVCVPTRNGVVELG |
Transcript ID | EFJ11384 |
Gene ID | Sm.26089 |
Gene Name | NA |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 2.1e-52 |
Motif start | 3 |
Motif end | 179 |
Protein seq | >EFJ11384 MALQHKLTFLVDNSSLCCWTYAIVWQLSSADGQMILSWGDGYFSTNENSTQRNEAKQFDADQILRRKVLRELHDLCHPEE DYREVDHVTDQEWFYLLSMSWNFACGEGIPGRAFQFGQHIWICDTVKPINFQCARLELAKSAGIQTIVCVPTRNGVVELG STEIVNECSRTLQDIRRYFEEEQQQQQSQ* |
CDS seq | >EFJ11384 ATGGCGCTGCAGCACAAGCTCACCTTCCTCGTCGACAACTCGTCCCTCTGCTGCTGGACGTATGCAATCGTCTGGCAGCT CTCCAGCGCCGACGGCCAGATGATTCTGAGCTGGGGCGACGGCTACTTCTCCACCAACGAGAACAGTACCCAGCGGAACG AGGCCAAGCAGTTCGATGCCGACCAAATTCTCAGGCGCAAGGTCCTCCGCGAGCTCCACGACCTGTGCCATCCCGAGGAG GATTATCGAGAGGTGGACCATGTCACCGACCAGGAGTGGTTCTATCTCCTCTCCATGTCGTGGAATTTCGCCTGCGGTGA AGGCATTCCAGGGCGGGCGTTCCAGTTTGGGCAGCACATATGGATTTGCGACACTGTCAAGCCCATTAACTTTCAGTGTG CGCGACTGGAGCTTGCCAAGAGCGCAGGAATTCAGACAATCGTCTGTGTTCCCACCCGAAACGGAGTTGTGGAGCTGGGA TCCACCGAAATCGTTAACGAGTGCTCGCGGACACTCCAAGACATAAGGAGATACTTTGAGGAGGAGCAGCAGCAGCAGCA ATCACAGTAG |