
Microexon ID | Sm_GL377622:37447-37461:+ |
Species | Selaginella moellendorffii | Coordinates | GL377622:37447..37461 |
Microexon Cluster ID | MEP42 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | bHLH-MYC_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Sm_GL377622:37447-37461:+ does not have available information here.
Sm_GL377622:37447-37461:+ does not have available information here.
Microexon DNA seq | AGCGCAGGAATTCAG |
Microexon Amino Acid seq | SAGIQ |
Microexon-tag DNA Seq | ACTGTCAAGCCCATTAACTTTCACTGTGCGCGACTGGAGCTTGCCAAGAGCGCAGGAATTCAGACAATCGTCTGTGTTCCCACCCGAAACGGAGTTGTGGAGCTGGGA |
Microexon-tag Amino Acid seq | TVKPINFHCARLELAKSAGIQTIVCVPTRNGVVELG |
Transcript ID | Sm.21890.1 |
Gene ID | Sm.21890 |
Gene Name | NA |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 2.5e-29 |
Motif start | 11 |
Motif end | 109 |
Protein seq | >Sm.21890.1 MPTKFSGARSALCELHDLCHPEEDYREVDHVTDQEWFYLLSMSWNFACGEGIPGRAFQFGQHIWICDTVKPINFHCARLE LAKSAGIQTIVCVPTRNGVVELGSTEIVSFRVFRFSLLEMIYVVPSARGHSKT* |
CDS seq | >Sm.21890.1 ATGCCGACCAAATTCTCAGGCGCAAGGTCCGCCTTGTGCGAGCTCCACGACCTGTGCCATCCCGAGGAGGATTATCGAGA GGTGGACCATGTCACCGACCAGGAGTGGTTCTATCTCCTCTCCATGTCGTGGAATTTCGCCTGCGGTGAAGGCATTCCAG GGCGGGCGTTCCAGTTTGGGCAGCACATATGGATTTGCGACACTGTCAAGCCCATTAACTTTCACTGTGCGCGACTGGAG CTTGCCAAGAGCGCAGGAATTCAGACAATCGTCTGTGTTCCCACCCGAAACGGAGTTGTGGAGCTGGGATCCACCGAAAT CGTAAGCTTTCGTGTTTTTCGCTTCTCTCTGTTGGAGATGATATATGTGGTGCCGAGTGCTCGCGGACACTCCAAGACAT AA |