Microexon ID Sm_GL377622:37447-37461:+
Species Selaginella moellendorffii
Coordinates GL377622:37447..37461
Microexon Cluster ID MEP42
Size 15
Phase 0
Pfam Domain Motif bHLH-MYC_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,15,45
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Sm_GL377622:37447-37461:+ does not have available information here.
Sm_GL377622:37447-37461:+ does not have available information here.
Microexon DNA seq AGCGCAGGAATTCAG
Microexon Amino Acid seq SAGIQ
Microexon-tag DNA Seq ACTGTCAAGCCCATTAACTTTCACTGTGCGCGACTGGAGCTTGCCAAGAGCGCAGGAATTCAGACAATCGTCTGTGTTCCCACCCGAAACGGAGTTGTGGAGCTGGGA
Microexon-tag Amino Acid seq TVKPINFHCARLELAKSAGIQTIVCVPTRNGVVELG
Transcript ID Sm.21890.1
Gene ID Sm.21890
Gene Name NA
Pfam domain motif bHLH-MYC_N
Motif E-value 2.5e-29
Motif start 11
Motif end 109
Protein seq >Sm.21890.1
MPTKFSGARSALCELHDLCHPEEDYREVDHVTDQEWFYLLSMSWNFACGEGIPGRAFQFGQHIWICDTVKPINFHCARLE
LAKSAGIQTIVCVPTRNGVVELGSTEIVSFRVFRFSLLEMIYVVPSARGHSKT*
CDS seq >Sm.21890.1
ATGCCGACCAAATTCTCAGGCGCAAGGTCCGCCTTGTGCGAGCTCCACGACCTGTGCCATCCCGAGGAGGATTATCGAGA
GGTGGACCATGTCACCGACCAGGAGTGGTTCTATCTCCTCTCCATGTCGTGGAATTTCGCCTGCGGTGAAGGCATTCCAG
GGCGGGCGTTCCAGTTTGGGCAGCACATATGGATTTGCGACACTGTCAAGCCCATTAACTTTCACTGTGCGCGACTGGAG
CTTGCCAAGAGCGCAGGAATTCAGACAATCGTCTGTGTTCCCACCCGAAACGGAGTTGTGGAGCTGGGATCCACCGAAAT
CGTAAGCTTTCGTGTTTTTCGCTTCTCTCTGTTGGAGATGATATATGTGGTGCCGAGTGCTCGCGGACACTCCAAGACAT
AA