Microexon ID Sm_GL377566:1146304-1146318:-
Species Selaginella moellendorffii
Coordinates GL377566:1146304..1146318
Microexon Cluster ID MEP42
Size 15
Phase 0
Pfam Domain Motif bHLH-MYC_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,15,45
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Sm_GL377566:1146304-1146318:- does not have available information here.
Sm_GL377566:1146304-1146318:- does not have available information here.
Microexon DNA seq AGCGCAGGAATTCAG
Microexon Amino Acid seq SAGIQ
Microexon-tag DNA Seq ACTGTCAAGCCCATTAACTTCCAGTGTGCGCGACTGGAGCTTGCCAAGAGCGCAGGAATTCAGACAATCGTCTGTGTTCCCACCCGAAACGGAGTTGTGGAGCTGGGA
Microexon-tag Amino Acid seq TVKPINFQCARLELAKSAGIQTIVCVPTRNGVVELG
Transcript ID Sm.1284.1
Gene ID Sm.1284
Gene Name NA
Pfam domain motif bHLH-MYC_N
Motif E-value 1.7e-51
Motif start 38
Motif end 213
Protein seq >Sm.1284.1
MDFDFSSFLGGSSPDFNPFQEEVGGGGGIQSTFADTALQHKLTLLVDNSSLCCWTYAIFWQLSSADGQMILGWGDGYFST
NENSTQRNEAKFDADQILRRRVLRELHDLCHPEEDLREVDHVTDQEWFYLLSMSWNFPCGEGIPGRAFQFGQHIWICDTV
KPINFQCARLELAKSAGIQTIVCVPTRNGVVELGSTEIVNECSRTLQDIRRYFEEEQQPGTFQVADVQQQPQQQPQQQPQ
QQHHHHQASAYESILLSGPLSSSSSITVNSGMERGAHLNPSLKASYPDKLSSSALGSSTGMEYFYSSDPYDMPSLDSDKE
SVPVILPPYSSKSYDDKHFFQLGAPPSNKGGGSIRPGHSNKFQAFVAESSEIVTSMDSKSRRVAEQQQQQQKQAASMTYL
REAASKSSGPKPGGMKQQQQQQQQSEATVAALMNPPRSSIETEQELDSEAEVSFREAADCSLNVVQKPPRKRGRKPANDR
EEPLNHVQAERQRREKLNQRFYALRSVVPNVSKMDKASLLEDAIKYIKELRDKVQNLETQMKEMQLHASSASSRHATHAA
AAATAAAAAAATNTNDATRLLGKQSSLATSPSASAGGDVLDTQSEVRSRYKEREQQPDVYVHLVGSEALVRVKCPKDSYP
VANLLVTLQDELQLQVEHASISSLDRHHLLHTVIVKMREHVSLTKEQLHSTVSRAFHLAKKDGAPAPAADRPSD*
CDS seq >Sm.1284.1
ATGGATTTCGATTTCTCGTCCTTTCTAGGGGGTTCTAGCCCCGACTTCAATCCGTTCCAGGAGGAGGTGGGCGGAGGGGG
GGGCATCCAGAGCACGTTTGCGGACACGGCGCTGCAGCACAAGCTCACCTTGCTCGTCGACAACTCGTCCCTCTGCTGCT
GGACGTATGCAATCTTCTGGCAGCTCTCCAGCGCCGACGGCCAGATGATTCTGGGCTGGGGCGACGGCTACTTCTCCACC
AACGAGAACAGTACCCAGCGGAACGAGGCCAAGTTCGATGCCGACCAAATTCTCAGGCGCAGGGTCCTCCGCGAGCTCCA
CGACCTGTGCCATCCCGAGGAGGACCTCCGAGAGGTGGACCATGTCACCGACCAGGAGTGGTTCTATCTCCTCTCCATGT
CGTGGAATTTCCCCTGCGGTGAAGGCATTCCAGGGCGGGCGTTCCAGTTTGGGCAGCACATATGGATTTGCGACACTGTC
AAGCCCATTAACTTCCAGTGTGCGCGACTGGAGCTTGCCAAGAGCGCAGGAATTCAGACAATCGTCTGTGTTCCCACCCG
AAACGGAGTTGTGGAGCTGGGATCCACCGAAATCGTTAACGAGTGCTCGCGGACACTCCAAGACATAAGGAGATACTTTG
AGGAGGAGCAGCAGCCAGGTACATTCCAGGTGGCGGATGTGCAGCAGCAGCCGCAGCAGCAGCCGCAGCAGCAACCGCAG
CAACAGCATCATCATCACCAGGCTTCAGCATACGAGAGCATTCTCCTCTCTGGCCCCTTGTCCAGCTCCAGCAGCATCAC
CGTCAACTCGGGCATGGAGCGTGGCGCACACCTCAACCCGTCGCTCAAGGCGTCCTATCCGGACAAGCTTAGCTCCTCGG
CCCTGGGCAGCAGCACCGGGATGGAGTACTTCTACTCGTCCGACCCTTACGACATGCCAAGCCTGGACAGCGACAAAGAG
AGCGTGCCCGTCATCCTGCCCCCGTACTCATCCAAGTCGTACGACGACAAGCACTTTTTCCAGCTCGGGGCACCACCCAG
CAACAAAGGTGGTGGGAGCATCAGGCCCGGCCACAGCAACAAGTTCCAGGCGTTTGTAGCGGAGAGTAGTGAGATTGTCA
CGTCCATGGACTCCAAGAGCCGCAGGGTGGCCGAGCAGCAGCAGCAGCAGCAAAAGCAAGCGGCAAGCATGACGTACTTG
AGGGAGGCAGCCAGCAAGAGCTCGGGTCCCAAGCCAGGAGGCATGAAGCAGCAGCAGCAGCAGCAGCAGCAATCGGAGGC
GACGGTGGCAGCTCTGATGAATCCACCGCGCTCCAGCATCGAGACGGAGCAGGAGCTGGACTCGGAAGCGGAGGTGTCGT
TTAGAGAAGCGGCAGACTGCAGCCTCAACGTGGTGCAAAAGCCTCCAAGGAAGCGTGGCCGGAAGCCTGCAAACGACCGC
GAGGAGCCCTTGAATCACGTCCAGGCGGAGCGGCAACGGCGGGAGAAGCTCAACCAGCGCTTCTACGCGCTGCGCTCGGT
GGTTCCAAACGTTTCCAAGATGGACAAAGCATCGCTGCTGGAAGACGCCATCAAGTACATCAAGGAGCTGCGGGACAAGG
TCCAAAACTTGGAAACACAGATGAAGGAGATGCAGCTCCACGCGTCGTCGGCGTCGTCTCGTCATGCTACTCATGCTGCC
GCTGCTGCTACTGCTGCTGCTGCTGCTGCTGCTACCAACACCAACGATGCGACGAGGCTCCTGGGAAAGCAGAGTAGCCT
GGCCACCTCTCCCAGTGCCAGCGCCGGCGGCGATGTGCTGGACACGCAGTCGGAGGTGCGGTCGCGCTACAAGGAGCGGG
AGCAGCAGCCGGACGTCTACGTGCACCTTGTGGGATCGGAGGCACTGGTGCGCGTCAAGTGCCCCAAGGACAGCTACCCC
GTCGCCAACCTCCTCGTCACGCTGCAAGACGAGCTCCAGCTCCAGGTGGAGCACGCCAGCATCTCCAGCCTCGACCGCCA
CCACCTCCTCCACACCGTCATTGTCAAGATGCGGGAACACGTGTCGCTGACCAAGGAGCAGCTGCACTCGACGGTGAGTC
GGGCGTTTCATCTGGCCAAGAAAGATGGCGCTCCTGCGCCTGCTGCTGATCGGCCAAGCGACTGA