
Microexon ID | Sm_GL377566:1146304-1146318:- |
Species | Selaginella moellendorffii | Coordinates | GL377566:1146304..1146318 |
Microexon Cluster ID | MEP42 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | bHLH-MYC_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Sm_GL377566:1146304-1146318:- does not have available information here.
Sm_GL377566:1146304-1146318:- does not have available information here.
Microexon DNA seq | AGCGCAGGAATTCAG |
Microexon Amino Acid seq | SAGIQ |
Microexon-tag DNA Seq | ACTGTCAAGCCCATTAACTTCCAGTGTGCGCGACTGGAGCTTGCCAAGAGCGCAGGAATTCAGACAATCGTCTGTGTTCCCACCCGAAACGGAGTTGTGGAGCTGGGA |
Microexon-tag Amino Acid seq | TVKPINFQCARLELAKSAGIQTIVCVPTRNGVVELG |
Transcript ID | Sm.1284.1 |
Gene ID | Sm.1284 |
Gene Name | NA |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 1.7e-51 |
Motif start | 38 |
Motif end | 213 |
Protein seq | >Sm.1284.1 MDFDFSSFLGGSSPDFNPFQEEVGGGGGIQSTFADTALQHKLTLLVDNSSLCCWTYAIFWQLSSADGQMILGWGDGYFST NENSTQRNEAKFDADQILRRRVLRELHDLCHPEEDLREVDHVTDQEWFYLLSMSWNFPCGEGIPGRAFQFGQHIWICDTV KPINFQCARLELAKSAGIQTIVCVPTRNGVVELGSTEIVNECSRTLQDIRRYFEEEQQPGTFQVADVQQQPQQQPQQQPQ QQHHHHQASAYESILLSGPLSSSSSITVNSGMERGAHLNPSLKASYPDKLSSSALGSSTGMEYFYSSDPYDMPSLDSDKE SVPVILPPYSSKSYDDKHFFQLGAPPSNKGGGSIRPGHSNKFQAFVAESSEIVTSMDSKSRRVAEQQQQQQKQAASMTYL REAASKSSGPKPGGMKQQQQQQQQSEATVAALMNPPRSSIETEQELDSEAEVSFREAADCSLNVVQKPPRKRGRKPANDR EEPLNHVQAERQRREKLNQRFYALRSVVPNVSKMDKASLLEDAIKYIKELRDKVQNLETQMKEMQLHASSASSRHATHAA AAATAAAAAAATNTNDATRLLGKQSSLATSPSASAGGDVLDTQSEVRSRYKEREQQPDVYVHLVGSEALVRVKCPKDSYP VANLLVTLQDELQLQVEHASISSLDRHHLLHTVIVKMREHVSLTKEQLHSTVSRAFHLAKKDGAPAPAADRPSD* |
CDS seq | >Sm.1284.1 ATGGATTTCGATTTCTCGTCCTTTCTAGGGGGTTCTAGCCCCGACTTCAATCCGTTCCAGGAGGAGGTGGGCGGAGGGGG GGGCATCCAGAGCACGTTTGCGGACACGGCGCTGCAGCACAAGCTCACCTTGCTCGTCGACAACTCGTCCCTCTGCTGCT GGACGTATGCAATCTTCTGGCAGCTCTCCAGCGCCGACGGCCAGATGATTCTGGGCTGGGGCGACGGCTACTTCTCCACC AACGAGAACAGTACCCAGCGGAACGAGGCCAAGTTCGATGCCGACCAAATTCTCAGGCGCAGGGTCCTCCGCGAGCTCCA CGACCTGTGCCATCCCGAGGAGGACCTCCGAGAGGTGGACCATGTCACCGACCAGGAGTGGTTCTATCTCCTCTCCATGT CGTGGAATTTCCCCTGCGGTGAAGGCATTCCAGGGCGGGCGTTCCAGTTTGGGCAGCACATATGGATTTGCGACACTGTC AAGCCCATTAACTTCCAGTGTGCGCGACTGGAGCTTGCCAAGAGCGCAGGAATTCAGACAATCGTCTGTGTTCCCACCCG AAACGGAGTTGTGGAGCTGGGATCCACCGAAATCGTTAACGAGTGCTCGCGGACACTCCAAGACATAAGGAGATACTTTG AGGAGGAGCAGCAGCCAGGTACATTCCAGGTGGCGGATGTGCAGCAGCAGCCGCAGCAGCAGCCGCAGCAGCAACCGCAG CAACAGCATCATCATCACCAGGCTTCAGCATACGAGAGCATTCTCCTCTCTGGCCCCTTGTCCAGCTCCAGCAGCATCAC CGTCAACTCGGGCATGGAGCGTGGCGCACACCTCAACCCGTCGCTCAAGGCGTCCTATCCGGACAAGCTTAGCTCCTCGG CCCTGGGCAGCAGCACCGGGATGGAGTACTTCTACTCGTCCGACCCTTACGACATGCCAAGCCTGGACAGCGACAAAGAG AGCGTGCCCGTCATCCTGCCCCCGTACTCATCCAAGTCGTACGACGACAAGCACTTTTTCCAGCTCGGGGCACCACCCAG CAACAAAGGTGGTGGGAGCATCAGGCCCGGCCACAGCAACAAGTTCCAGGCGTTTGTAGCGGAGAGTAGTGAGATTGTCA CGTCCATGGACTCCAAGAGCCGCAGGGTGGCCGAGCAGCAGCAGCAGCAGCAAAAGCAAGCGGCAAGCATGACGTACTTG AGGGAGGCAGCCAGCAAGAGCTCGGGTCCCAAGCCAGGAGGCATGAAGCAGCAGCAGCAGCAGCAGCAGCAATCGGAGGC GACGGTGGCAGCTCTGATGAATCCACCGCGCTCCAGCATCGAGACGGAGCAGGAGCTGGACTCGGAAGCGGAGGTGTCGT TTAGAGAAGCGGCAGACTGCAGCCTCAACGTGGTGCAAAAGCCTCCAAGGAAGCGTGGCCGGAAGCCTGCAAACGACCGC GAGGAGCCCTTGAATCACGTCCAGGCGGAGCGGCAACGGCGGGAGAAGCTCAACCAGCGCTTCTACGCGCTGCGCTCGGT GGTTCCAAACGTTTCCAAGATGGACAAAGCATCGCTGCTGGAAGACGCCATCAAGTACATCAAGGAGCTGCGGGACAAGG TCCAAAACTTGGAAACACAGATGAAGGAGATGCAGCTCCACGCGTCGTCGGCGTCGTCTCGTCATGCTACTCATGCTGCC GCTGCTGCTACTGCTGCTGCTGCTGCTGCTGCTACCAACACCAACGATGCGACGAGGCTCCTGGGAAAGCAGAGTAGCCT GGCCACCTCTCCCAGTGCCAGCGCCGGCGGCGATGTGCTGGACACGCAGTCGGAGGTGCGGTCGCGCTACAAGGAGCGGG AGCAGCAGCCGGACGTCTACGTGCACCTTGTGGGATCGGAGGCACTGGTGCGCGTCAAGTGCCCCAAGGACAGCTACCCC GTCGCCAACCTCCTCGTCACGCTGCAAGACGAGCTCCAGCTCCAGGTGGAGCACGCCAGCATCTCCAGCCTCGACCGCCA CCACCTCCTCCACACCGTCATTGTCAAGATGCGGGAACACGTGTCGCTGACCAAGGAGCAGCTGCACTCGACGGTGAGTC GGGCGTTTCATCTGGCCAAGAAAGATGGCGCTCCTGCGCCTGCTGCTGATCGGCCAAGCGACTGA |