
Microexon ID | Sb_6:44130406-44130420:- |
Species | Sorghum Bicolor | Coordinates | 6:44130406..44130420 |
Microexon Cluster ID | MEP42 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | bHLH-MYC_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AGCGCGTCCATTCAG |
Microexon Amino Acid seq | SASIQ |
Microexon-tag DNA Seq | GCGCACCTCGCCGACAGCAAAGCCTTCCCCCGCGCGCTCCTGGCCAAGAGCGCGTCCATTCAGTTAATCGTCTGCATCCCGGTTATGGGTGGTGTGCTTGAGCTGGGT |
Microexon-tag Amino Acid Seq | AHLADSKAFPRALLAKSASIQLIVCIPVMGGVLELG |
Microexon-tag spanning region | 44130232-44130646 |
Microexon-tag prediction score | 0.9129 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KXG26290x |
Reference Transcript ID | KXG26290 |
Gene ID | SORBI_3006G076900 |
Gene Name | NA |
Transcript ID | KXG26290 |
Protein ID | |
Gene ID | SORBI_3006G076900 |
Gene Name | |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 4.00E-47 |
Motif start | 20 |
Motif end | 205 |
Protein seq | >KXG26290 MALSASLVQQELQQPAERQLRNQLAAAARSINWTYALFWSISSTQPGMLTWTDGFYNGEVKTRKISNSVKLTADQLVMQR SEQLRQLYEALLSGECDRRAAPARPVGSLSPEDLGDTEWYYVICMTYAFRPGQGLPGRSFASNEHVWLRNAHLADSKAFP RALLAKSASIQLIVCIPVMGGVLELGTTNRVPEDPGLVSRATAAFWESQCPTYSEEPSSNPSANEAGETADIVVFEDLGH NAMVETMTATGGHGQELGEAEGLSNASLEHMTKEMDEFYSLFEEMDVQPLPLEDSWIMLDGSNNFEVPSPPLGARATTNN VADTSSAPVDGSRATCFMPWTTRPSRSYSDEAAAVPAVEEPQKLLKKVVSGGRAWANCGVGGTVRTAQESGIKNHVMSER KRREKLNEMFLILKLLVPSIQKVDKVSILAETIAYLKELQRKVQELKSSRELLSRPSETTARPTKPCGIGSESVRKKLSA GSKRKSPDFSGDVEKEHPWVLPKDGTSNVTVAVSDRDVLLEVQCRWEELLMTRVFDSIKGLHLDVLSVQASAPDGFMGLK IRAKYAGSSAVVPWMISEALRKAIGKR* |
CDS seq | >KXG26290 ATGGCACTATCAGCTTCCCTGGTTCAGCAAGAACTGCAGCAGCCTGCAGAGAGGCAGTTGAGGAACCAGCTCGCTGCAGC CGCGAGGAGCATCAACTGGACCTATGCCCTCTTCTGGTCCATTTCAAGCACTCAACCAGGGATGCTGACGTGGACGGATG GGTTCTACAACGGCGAGGTAAAGACGAGGAAGATCTCCAACTCTGTGAAGCTGACAGCTGACCAGCTCGTCATGCAGAGG AGCGAACAGCTCCGGCAGCTGTACGAGGCCCTCCTCTCCGGCGAGTGCGACCGTCGCGCAGCGCCGGCACGGCCGGTCGG CTCGCTGTCGCCGGAGGACCTCGGTGACACCGAGTGGTACTACGTGATCTGCATGACCTACGCCTTCCGGCCTGGCCAAG GGTTGCCGGGCAGGAGTTTTGCGAGCAACGAGCATGTCTGGCTGCGCAACGCGCACCTCGCCGACAGCAAAGCCTTCCCC CGCGCGCTCCTGGCCAAGAGCGCGTCCATTCAGTTAATCGTCTGCATCCCGGTTATGGGTGGTGTGCTTGAGCTGGGTAC AACTAATAGGGTGCCGGAGGACCCAGGCTTGGTCAGCCGAGCAACCGCAGCTTTCTGGGAGTCGCAATGTCCGACATACT CTGAAGAGCCGAGCTCCAACCCGTCAGCAAACGAAGCCGGCGAGACCGCAGACATTGTTGTGTTCGAGGACCTCGGTCAC AATGCCATGGTGGAGACGATGACTGCCACAGGGGGACATGGACAGGAGCTAGGAGAAGCTGAGGGCCTGTCAAATGCAAG CCTGGAGCACATGACGAAGGAGATGGACGAGTTCTACAGCCTCTTCGAGGAAATGGACGTGCAGCCACTACCACTAGAGG ATAGCTGGATCATGCTGGACGGGTCTAATAATTTCGAAGTCCCCTCACCGCCCCTGGGGGCTAGGGCTACTACTAACAAC GTTGCCGACACCTCAAGCGCACCAGTTGACGGCTCTCGCGCGACCTGTTTCATGCCTTGGACGACGAGGCCCTCGCGGTC CTACTCCGATGAAGCGGCGGCAGTACCGGCCGTCGAAGAGCCGCAGAAATTGCTGAAGAAAGTGGTGAGCGGCGGCAGAG CTTGGGCGAACTGTGGTGTCGGGGGCACGGTACGAACAGCCCAGGAAAGTGGCATCAAGAATCACGTCATGTCAGAGCGA AAGCGCCGGGAGAAGCTCAACGAGATGTTCCTCATTCTCAAGTTGTTGGTTCCGTCCATTCAGAAGGTGGACAAAGTGTC GATCCTCGCCGAAACGATAGCCTACCTCAAGGAGCTTCAGCGAAAGGTACAAGAGCTAAAATCCAGTAGGGAACTTCTAT CGCGCCCATCAGAAACAACAGCAAGGCCTACAAAGCCCTGTGGCATTGGTAGTGAGAGTGTCAGGAAGAAACTCTCTGCG GGCTCCAAGAGGAAGAGCCCAGACTTCAGCGGTGACGTGGAGAAGGAGCACCCCTGGGTCCTGCCCAAGGACGGCACCAG CAACGTCACCGTCGCCGTCTCGGACAGGGACGTGCTCCTGGAGGTGCAATGCCGGTGGGAGGAGCTCCTGATGACACGAG TGTTTGACTCCATCAAGGGCCTGCATTTGGACGTTCTCTCGGTTCAGGCTTCGGCACCAGATGGCTTTATGGGGCTTAAG ATACGAGCTAAGTATGCAGGCTCCAGTGCCGTCGTGCCTTGGATGATCAGCGAGGCTCTTCGTAAAGCTATAGGGAAGCG ATGA |
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