Microexon ID Sb_6:44130406-44130420:-
Species Sorghum   Bicolor
Coordinates 6:44130406..44130420
Microexon Cluster ID MEP42
Size 15
Phase 0
Pfam Domain Motif bHLH-MYC_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,15,45
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq AGCGCGTCCATTCAG
Microexon Amino Acid seq SASIQ
Microexon-tag DNA Seq GCGCACCTCGCCGACAGCAAAGCCTTCCCCCGCGCGCTCCTGGCCAAGAGCGCGTCCATTCAGTTAATCGTCTGCATCCCGGTTATGGGTGGTGTGCTTGAGCTGGGT
Microexon-tag Amino Acid Seq AHLADSKAFPRALLAKSASIQLIVCIPVMGGVLELG
Microexon-tag spanning region44130232-44130646
Microexon-tag prediction score0.9129
Overlapped with the annotated transcript (%) 100
New Transcript ID KXG26290x
Reference Transcript ID KXG26290
Gene ID SORBI_3006G076900
Gene Name NA
Transcript ID KXG26290
Protein ID
Gene ID SORBI_3006G076900
Gene Name
Pfam domain motif bHLH-MYC_N
Motif E-value 4.00E-47
Motif start 20
Motif end 205
Protein seq >KXG26290
MALSASLVQQELQQPAERQLRNQLAAAARSINWTYALFWSISSTQPGMLTWTDGFYNGEVKTRKISNSVKLTADQLVMQR
SEQLRQLYEALLSGECDRRAAPARPVGSLSPEDLGDTEWYYVICMTYAFRPGQGLPGRSFASNEHVWLRNAHLADSKAFP
RALLAKSASIQLIVCIPVMGGVLELGTTNRVPEDPGLVSRATAAFWESQCPTYSEEPSSNPSANEAGETADIVVFEDLGH
NAMVETMTATGGHGQELGEAEGLSNASLEHMTKEMDEFYSLFEEMDVQPLPLEDSWIMLDGSNNFEVPSPPLGARATTNN
VADTSSAPVDGSRATCFMPWTTRPSRSYSDEAAAVPAVEEPQKLLKKVVSGGRAWANCGVGGTVRTAQESGIKNHVMSER
KRREKLNEMFLILKLLVPSIQKVDKVSILAETIAYLKELQRKVQELKSSRELLSRPSETTARPTKPCGIGSESVRKKLSA
GSKRKSPDFSGDVEKEHPWVLPKDGTSNVTVAVSDRDVLLEVQCRWEELLMTRVFDSIKGLHLDVLSVQASAPDGFMGLK
IRAKYAGSSAVVPWMISEALRKAIGKR*
CDS seq >KXG26290
ATGGCACTATCAGCTTCCCTGGTTCAGCAAGAACTGCAGCAGCCTGCAGAGAGGCAGTTGAGGAACCAGCTCGCTGCAGC
CGCGAGGAGCATCAACTGGACCTATGCCCTCTTCTGGTCCATTTCAAGCACTCAACCAGGGATGCTGACGTGGACGGATG
GGTTCTACAACGGCGAGGTAAAGACGAGGAAGATCTCCAACTCTGTGAAGCTGACAGCTGACCAGCTCGTCATGCAGAGG
AGCGAACAGCTCCGGCAGCTGTACGAGGCCCTCCTCTCCGGCGAGTGCGACCGTCGCGCAGCGCCGGCACGGCCGGTCGG
CTCGCTGTCGCCGGAGGACCTCGGTGACACCGAGTGGTACTACGTGATCTGCATGACCTACGCCTTCCGGCCTGGCCAAG
GGTTGCCGGGCAGGAGTTTTGCGAGCAACGAGCATGTCTGGCTGCGCAACGCGCACCTCGCCGACAGCAAAGCCTTCCCC
CGCGCGCTCCTGGCCAAGAGCGCGTCCATTCAGTTAATCGTCTGCATCCCGGTTATGGGTGGTGTGCTTGAGCTGGGTAC
AACTAATAGGGTGCCGGAGGACCCAGGCTTGGTCAGCCGAGCAACCGCAGCTTTCTGGGAGTCGCAATGTCCGACATACT
CTGAAGAGCCGAGCTCCAACCCGTCAGCAAACGAAGCCGGCGAGACCGCAGACATTGTTGTGTTCGAGGACCTCGGTCAC
AATGCCATGGTGGAGACGATGACTGCCACAGGGGGACATGGACAGGAGCTAGGAGAAGCTGAGGGCCTGTCAAATGCAAG
CCTGGAGCACATGACGAAGGAGATGGACGAGTTCTACAGCCTCTTCGAGGAAATGGACGTGCAGCCACTACCACTAGAGG
ATAGCTGGATCATGCTGGACGGGTCTAATAATTTCGAAGTCCCCTCACCGCCCCTGGGGGCTAGGGCTACTACTAACAAC
GTTGCCGACACCTCAAGCGCACCAGTTGACGGCTCTCGCGCGACCTGTTTCATGCCTTGGACGACGAGGCCCTCGCGGTC
CTACTCCGATGAAGCGGCGGCAGTACCGGCCGTCGAAGAGCCGCAGAAATTGCTGAAGAAAGTGGTGAGCGGCGGCAGAG
CTTGGGCGAACTGTGGTGTCGGGGGCACGGTACGAACAGCCCAGGAAAGTGGCATCAAGAATCACGTCATGTCAGAGCGA
AAGCGCCGGGAGAAGCTCAACGAGATGTTCCTCATTCTCAAGTTGTTGGTTCCGTCCATTCAGAAGGTGGACAAAGTGTC
GATCCTCGCCGAAACGATAGCCTACCTCAAGGAGCTTCAGCGAAAGGTACAAGAGCTAAAATCCAGTAGGGAACTTCTAT
CGCGCCCATCAGAAACAACAGCAAGGCCTACAAAGCCCTGTGGCATTGGTAGTGAGAGTGTCAGGAAGAAACTCTCTGCG
GGCTCCAAGAGGAAGAGCCCAGACTTCAGCGGTGACGTGGAGAAGGAGCACCCCTGGGTCCTGCCCAAGGACGGCACCAG
CAACGTCACCGTCGCCGTCTCGGACAGGGACGTGCTCCTGGAGGTGCAATGCCGGTGGGAGGAGCTCCTGATGACACGAG
TGTTTGACTCCATCAAGGGCCTGCATTTGGACGTTCTCTCGGTTCAGGCTTCGGCACCAGATGGCTTTATGGGGCTTAAG
ATACGAGCTAAGTATGCAGGCTCCAGTGCCGTCGTGCCTTGGATGATCAGCGAGGCTCTTCGTAAAGCTATAGGGAAGCG
ATGA
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