| Microexon ID | Pt_5:21298622-21298636:+ |
| Species | Populus Trichocarpa | Coordinates | 5:21298622..21298636 |
| Microexon Cluster ID | MEP42 |
| Size | 15 |
| Phase | 0 |
| Pfam Domain Motif | bHLH-MYC_N |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | AGTGCTCGTGTACAG |
| Microexon Amino Acid seq | SARVQ |
| Microexon-tag DNA Seq | GCAAACGAGATTGATAGCAAAACTTTCTCTAGAGCAATCCTTGCCAAGAGTGCTCGTGTACAGACTGTGGTGTGCATCCCTCTTCTCGATGGTGTTGTTGAATTTGGC |
| Microexon-tag Amino Acid Seq | ANEIDSKTFSRAILAKSARVQTVVCIPLLDGVVEFG |
| Microexon-tag spanning region | 21297279-21298830 |
| Microexon-tag prediction score | 0.9333 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Potri.005G208600.4.v4.1x |
| Reference Transcript ID | Potri.005G208600.4.v4.1 |
| Gene ID | Potri.005G208600.v4.1 |
| Gene Name | NA |
| Transcript ID | Potri.005G208600.4.v4.1 |
| Protein ID | |
| Gene ID | Potri.005G208600.v4.1 |
| Gene Name | |
| Pfam domain motif | bHLH-MYC_N |
| Motif E-value | 1.80E-53 |
| Motif start | 9 |
| Motif end | 191 |
| Protein seq | >Potri.005G208600.4.v4.1 MATPPSSRLQTMLQAAVQSVQWTYSLFWQMCPQQGILVWGDGYYNGPIKTRKTVQPMEVTTEEASLQRSQQLRELYDSLS IGETNQPARRPCAALSPEDLTETEWFYLMCVSFSFPPGGGLPGKAYARRRHVWLTGANEIDSKTFSRAILAKSARVQTVV CIPLLDGVVEFGTTDKVQEDLGLIQHVKTFFSDHHHRHLTPPKPALSEHSTSSPATSSHDHPRFHPPPIPPFYVAAEPSA NAEQIDEDEEEDEEEEEHDSDSEAETSRDDHLEPRQAQNPHQVVAAEPSELMQLEMSEDIRLGSPDDGSNNLDSDFPLTG PDNSMDHRSRADSYKAESARRWTMLQDNPFSGNLQPSASGPPPLEDLAQEDTHYSQTISTILQSQPVWLAAEPSSIAYEA RYHQSAFSRWTNRSDHLFHVSVETTSQWLLKYILFSVPHLHSKSREDNSPKSRDGEAASRFRKGTPQDELSANHVLAERR RREKLNERFIMLRSLVPFVTKMDKASILGDTIEYVKQLRQKIQDLETRNKQMESEQRPRSVDRPQRTSTSDSLKKQKSGV TVVDRARSLGPLPDKRKMRVVEDSAGGGAKPKTVGALPQPEPVVHKELETSVEVSIIESDALLELECGFREGLLLDIMQM LRELRIETIAVQSSLNNGIFAGELRAKVKENVNGKKVSIVEVKRAIHKIIPHD* |
| CDS seq | >Potri.005G208600.4.v4.1 ATGGCTACCCCGCCTAGTAGCCGCTTGCAGACTATGTTACAGGCTGCAGTGCAATCGGTTCAATGGACATACAGTCTCTT TTGGCAAATGTGTCCACAACAAGGGATCTTAGTGTGGGGAGATGGGTATTACAATGGGCCAATCAAGACTAGAAAAACAG TGCAACCAATGGAGGTTACGACTGAAGAAGCCTCCTTGCAAAGGAGTCAGCAGCTTAGAGAGCTCTACGATTCATTATCT ATAGGAGAGACCAACCAGCCAGCACGTCGACCTTGCGCCGCCTTGTCACCGGAGGACTTGACGGAGACTGAGTGGTTTTA TCTGATGTGTGTTTCCTTCTCTTTCCCTCCTGGTGGTGGGTTACCAGGAAAGGCCTACGCAAGGAGACGACACGTATGGC TTACTGGTGCAAACGAGATTGATAGCAAAACTTTCTCTAGAGCAATCCTTGCCAAGAGTGCTCGTGTACAGACTGTGGTG TGCATCCCTCTTCTCGATGGTGTTGTTGAATTTGGCACAACAGACAAGGTTCAAGAGGATCTTGGGCTTATCCAACACGT AAAAACCTTCTTTAGTGACCACCACCACCGCCACCTTACTCCCCCAAAACCAGCTTTATCCGAGCACTCCACTTCCAGCC CTGCCACCTCCTCTCATGACCACCCTCGTTTCCATCCTCCACCCATTCCTCCCTTCTATGTGGCTGCAGAGCCATCAGCC AATGCCGAACAAATTGATGAGGATGAAGAAGAAGATGAGGAGGAGGAGGAACATGATTCAGACTCAGAAGCCGAAACCAG TCGCGATGATCACTTAGAACCGAGACAAGCTCAAAACCCTCATCAAGTTGTAGCAGCTGAGCCGAGCGAGTTGATGCAAC TTGAGATGTCTGAGGATATCAGGCTTGGTTCTCCTGATGATGGGTCTAATAACTTGGACTCGGATTTTCCTTTGACTGGT CCAGACAACTCGATGGATCACCGGAGCCGAGCTGACTCGTATAAAGCGGAGTCCGCTCGGAGGTGGACAATGTTGCAAGA CAACCCTTTCAGTGGCAACCTTCAGCCATCAGCTTCAGGACCACCTCCGCTAGAAGACTTGGCGCAAGAGGACACGCACT ACTCCCAAACCATATCGACCATCCTCCAAAGCCAACCGGTATGGCTGGCAGCAGAGCCATCGTCCATTGCATACGAGGCA CGGTACCACCAATCAGCCTTTTCCAGGTGGACAAACCGCTCCGATCACCTCTTCCACGTGTCAGTTGAGACCACCTCTCA GTGGCTCCTAAAATACATTCTCTTTAGCGTACCACACCTCCACAGCAAAAGCCGCGAAGACAATTCCCCAAAGTCACGTG ACGGTGAAGCAGCCAGTCGGTTCCGCAAGGGGACCCCACAGGATGAGCTCAGTGCCAATCACGTGCTAGCAGAACGACGC CGGAGAGAGAAGTTAAACGAGAGGTTTATAATGCTAAGGTCGCTGGTGCCCTTCGTGACCAAAATGGACAAAGCATCAAT ATTAGGGGACACAATTGAATACGTGAAGCAACTCCGTCAAAAAATCCAGGATTTGGAGACGCGTAATAAACAGATGGAGA GTGAGCAACGCCCGAGATCGGTGGACCGTCCACAGAGGACTTCTACTTCCGATAGTTTGAAAAAGCAAAAGAGTGGGGTC ACAGTGGTGGATCGGGCGAGGAGTCTTGGGCCTCTGCCAGATAAGAGGAAGATGAGGGTCGTAGAGGATAGTGCTGGTGG TGGTGCCAAGCCCAAAACGGTGGGTGCCTTGCCACAGCCAGAGCCGGTGGTCCATAAGGAGCTGGAGACCAGCGTAGAGG TGTCGATAATAGAGAGTGACGCATTGTTAGAGTTGGAATGTGGTTTTAGAGAGGGGCTTTTATTAGACATAATGCAAATG CTAAGGGAGCTCAGGATAGAAACTATTGCGGTTCAGTCTTCTTTGAACAATGGGATCTTTGCAGGGGAATTGAGGGCCAA GGTGAAGGAGAATGTTAATGGAAAGAAGGTGAGCATTGTGGAGGTGAAGAGAGCAATACATAAAATAATACCCCATGATT GA |
Pt_5:21298622-21298636:+ does not have available information here.