
Microexon ID | Ps_NC_039365.1:4844682-4844696:+ |
Species | Papaver somniferum | Coordinates | NC_039365.1:4844682..4844696 |
Microexon Cluster ID | MEP42 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | bHLH-MYC_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AGTGCCTCCATTCAG |
Microexon Amino Acid seq | SASIQ |
Microexon-tag DNA Seq | GCTCATTGTGCAGATAGCAAAGTTTACATTCGATCACTACTTGCAAAGAGTGCCTCCATTCAGACTGTTGTGTGCTTTCCTTTCTTGGGCGGTGTGATCGAGCTAGGC |
Microexon-tag Amino Acid Seq | AHCADSKVYIRSLLAKSASIQTVVCFPFLGGVIELG |
Microexon-tag spanning region | 4844494-4845056 |
Microexon-tag prediction score | 0.9486 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026553321.1x |
Reference Transcript ID | XM_026553321.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026553321.1 |
Protein ID | XP_026409106.1 |
Gene ID | LOC113304253 |
Gene Name | NA |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 8.1e-52 |
Motif start | 17 |
Motif end | 202 |
Protein seq | >XP_026409106.1 MATPGLQNHQGVAETHLKHQLAVAVRSIQWSYAIFWTPSAKNKGGLEWGAGYYNGDIKTRKTVQLQHMEISANRLGLQRS EQLRELYESLAESESNQQARRPSASLSPEDLSDAEWYYLVCMSFTFSSGQGLPGRVFSTGQPIWLCDAHCADSKVYIRSL LAKSASIQTVVCFPFLGGVIELGVTEMVPEDLALVQHVKTVFMELKKPSCSLNGDKIGEDILGTEIIHEIVDTVAALDCG IQHSSYYLPQSILKEEIELQQNGVNTVIDEDLIANSPSSDECESDEEDSYMVNGGNLGVSQVQSWQFLGDEFEHSNGMQG SESSSDCVSQKSFLNQEKSSSQLKKTNSVQGLQECNHTKFNDLDLGTDDMHYKRTLSVIFKTSNALVTAPCSNSANHKSS FRRWKRRGLVGYVKNKSGTPQKMLKQILFDVPLMHSGAYLKSNDGKEFENGVLKSEGHDIAIGHEKREALDDKFLVLRSL VPSINKFDRTSLLSDTVDYLKELERRVEELESCREFTEFETIEKRKHPDIVERTSDNYGYNENANSPKAVLHKRKACDID EIDPELDSVSPKDNVATYVTVCMIEKEVLVEIRCPWKDCLIIEIIDAISNLHLDAHSIQSAATEGILTLTLKSKFKGAEV VSAGMIKQAIQRVIGTC* |
CDS seq | >XM_026553321.1 ATGGCTACTCCTGGACTCCAAAACCATCAAGGAGTTGCAGAAACCCATCTTAAACATCAACTTGCTGTTGCTGTGAGGAG TATTCAATGGAGTTATGCAATCTTTTGGACTCCCTCTGCTAAGAATAAAGGGGGTTTGGAATGGGGTGCTGGTTACTACA ATGGAGATATCAAGACAAGGAAGACAGTGCAACTGCAGCATATGGAAATTAGTGCAAATCGATTGGGTTTACAAAGGAGT GAACAATTGAGAGAACTGTACGAGTCTCTTGCAGAAAGTGAAAGTAACCAACAAGCAAGAAGACCTTCAGCTTCATTGTC TCCGGAAGATCTTTCGGACGCGGAGTGGTATTACTTAGTTTGTATGTCCTTCACATTCAGTTCTGGTCAAGGCTTGCCAG GAAGAGTATTCTCAACCGGTCAACCTATTTGGCTGTGTGATGCTCATTGTGCAGATAGCAAAGTTTACATTCGATCACTA CTTGCAAAGAGTGCCTCCATTCAGACTGTTGTGTGCTTTCCTTTCTTGGGCGGTGTGATCGAGCTAGGCGTGACTGAAAT GGTTCCTGAAGATCTTGCTTTGGTTCAACATGTTAAAACTGTCTTCATGGAGTTGAAAAAGCCTAGTTGCTCCCTGAATG GAGATAAAATCGGTGAAGATATTTTGGGTACTGAAATTATTCATGAGATAGTTGATACTGTGGCAGCATTAGATTGTGGA ATTCAACACAGTTCATACTATCTTCCTCAGTCCATTCTAAAAGAAGAAATCGAGCTTCAACAAAATGGTGTAAACACAGT TATTGATGAAGATTTAATTGCTAACTCTCCTAGTTCAGATGAATGTGAATCTGATGAAGAGGATTCCTACATGGTAAATG GTGGAAATCTCGGTGTTTCTCAAGTTCAAAGCTGGCAATTCTTGGGTGATGAATTTGAACATAGTAACGGGATGCAAGGT TCAGAAAGTTCAAGTGACTGTGTATCTCAGAAGTCATTTTTGAATCAAGAGAAATCTTCTTCTCAGCTGAAAAAAACAAA TAGTGTTCAAGGGCTTCAAGAATGCAATCATACAAAGTTCAACGATTTGGATCTTGGGACTGATGATATGCACTACAAAA GAACACTTTCCGTCATTTTCAAAACTTCCAATGCACTGGTAACAGCACCATGTTCTAATAGTGCTAATCACAAATCCAGT TTCAGGAGATGGAAGCGGCGAGGCTTAGTGGGTTATGTGAAGAATAAATCTGGAACACCACAGAAAATGTTGAAGCAAAT TTTGTTTGATGTTCCTTTGATGCACAGTGGGGCTTATCTGAAATCAAATGATGGAAAGGAATTTGAAAATGGGGTTTTGA AATCAGAAGGACATGATATTGCTATAGGCCACGAAAAAAGAGAAGCACTTGATGACAAGTTTCTCGTTCTCAGATCCTTA GTTCCCTCTATAAACAAGTTCGATAGGACATCTCTCCTCAGTGACACGGTAGATTACTTGAAAGAGCTCGAGAGAAGAGT CGAAGAGCTAGAATCATGCAGGGAGTTTACAGAGTTTGAAACTATAGAGAAAAGGAAACACCCGGATATAGTAGAAAGGA CTTCTGATAATTACGGGTATAATGAAAATGCTAACAGTCCAAAGGCCGTGTTACACAAGAGAAAAGCTTGCGATATTGAT GAAATAGACCCTGAGCTAGATTCTGTGTCACCTAAAGACAATGTAGCAACATATGTTACAGTCTGCATGATTGAGAAAGA GGTTTTGGTTGAGATACGCTGTCCATGGAAAGATTGCTTAATCATCGAAATTATAGATGCAATAAGTAATCTCCATTTGG ATGCTCATTCAATTCAGTCTGCAGCAACTGAAGGCATTCTTACTCTAACCCTGAAATCTAAGTTCAAAGGAGCCGAAGTT GTATCAGCAGGAATGATCAAACAAGCAATTCAGAGAGTTATTGGTACCTGCTGA |
Microexon DNA seq | AGTGCCTCCATTCAG |
Microexon Amino Acid seq | SASIQ |
Microexon-tag DNA Seq | GCTCATTGTGCAGATAGCAAAGTTTACATTCGATCACTACTTGCAAAGAGTGCCTCCATTCAGACTGTTGTGTGCTTTCCTTTCTTGGGCGGTGTGATCGAGCTAGGC |
Microexon-tag Amino Acid seq | AHCADSKVYIRSLLAKSASIQTVVCFPFLGGVIELG |
Transcript ID | XM_026553321.1 |
Gene ID | Ps.47730 |
Gene Name | NA |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 8.1e-52 |
Motif start | 17 |
Motif end | 202 |
Protein seq | >XM_026553321.1 MATPGLQNHQGVAETHLKHQLAVAVRSIQWSYAIFWTPSAKNKGGLEWGAGYYNGDIKTRKTVQLQHMEISANRLGLQRS EQLRELYESLAESESNQQARRPSASLSPEDLSDAEWYYLVCMSFTFSSGQGLPGRVFSTGQPIWLCDAHCADSKVYIRSL LAKSASIQTVVCFPFLGGVIELGVTEMVPEDLALVQHVKTVFMELKKPSCSLNGDKIGEDILGTEIIHEIVDTVAALDCG IQHSSYYLPQSILKEEIELQQNGVNTVIDEDLIANSPSSDECESDEEDSYMVNGGNLGVSQVQSWQFLGDEFEHSNGMQG SESSSDCVSQKSFLNQEKSSSQLKKTNSVQGLQECNHTKFNDLDLGTDDMHYKRTLSVIFKTSNALVTAPCSNSANHKSS FRRWKRRGLVGYVKNKSGTPQKMLKQILFDVPLMHSGAYLKSNDGKEFENGVLKSEGHDIAIGHEKREALDDKFLVLRSL VPSINKFDRTSLLSDTVDYLKELERRVEELESCREFTEFETIEKRKHPDIVERTSDNYGYNENANSPKAVLHKRKACDID EIDPELDSVSPKDNVATYVTVCMIEKEVLVEIRCPWKDCLIIEIIDAISNLHLDAHSIQSAATEGILTLTLKSKFKGAEV VSAGMIKQAIQRVIGTC* |
CDS seq | >XM_026553321.1 ATGGCTACTCCTGGACTCCAAAACCATCAAGGAGTTGCAGAAACCCATCTTAAACATCAACTTGCTGTTGCTGTGAGGAG TATTCAATGGAGTTATGCAATCTTTTGGACTCCCTCTGCTAAGAATAAAGGGGGTTTGGAATGGGGTGCTGGTTACTACA ATGGAGATATCAAGACAAGGAAGACAGTGCAACTGCAGCATATGGAAATTAGTGCAAATCGATTGGGTTTACAAAGGAGT GAACAATTGAGAGAACTGTACGAGTCTCTTGCAGAAAGTGAAAGTAACCAACAAGCAAGAAGACCTTCAGCTTCATTGTC TCCGGAAGATCTTTCGGACGCGGAGTGGTATTACTTAGTTTGTATGTCCTTCACATTCAGTTCTGGTCAAGGCTTGCCAG GAAGAGTATTCTCAACCGGTCAACCTATTTGGCTGTGTGATGCTCATTGTGCAGATAGCAAAGTTTACATTCGATCACTA CTTGCAAAGAGTGCCTCCATTCAGACTGTTGTGTGCTTTCCTTTCTTGGGCGGTGTGATCGAGCTAGGCGTGACTGAAAT GGTTCCTGAAGATCTTGCTTTGGTTCAACATGTTAAAACTGTCTTCATGGAGTTGAAAAAGCCTAGTTGCTCCCTGAATG GAGATAAAATCGGTGAAGATATTTTGGGTACTGAAATTATTCATGAGATAGTTGATACTGTGGCAGCATTAGATTGTGGA ATTCAACACAGTTCATACTATCTTCCTCAGTCCATTCTAAAAGAAGAAATCGAGCTTCAACAAAATGGTGTAAACACAGT TATTGATGAAGATTTAATTGCTAACTCTCCTAGTTCAGATGAATGTGAATCTGATGAAGAGGATTCCTACATGGTAAATG GTGGAAATCTCGGTGTTTCTCAAGTTCAAAGCTGGCAATTCTTGGGTGATGAATTTGAACATAGTAACGGGATGCAAGGT TCAGAAAGTTCAAGTGACTGTGTATCTCAGAAGTCATTTTTGAATCAAGAGAAATCTTCTTCTCAGCTGAAAAAAACAAA TAGTGTTCAAGGGCTTCAAGAATGCAATCATACAAAGTTCAACGATTTGGATCTTGGGACTGATGATATGCACTACAAAA GAACACTTTCCGTCATTTTCAAAACTTCCAATGCACTGGTAACAGCACCATGTTCTAATAGTGCTAATCACAAATCCAGT TTCAGGAGATGGAAGCGGCGAGGCTTAGTGGGTTATGTGAAGAATAAATCTGGAACACCACAGAAAATGTTGAAGCAAAT TTTGTTTGATGTTCCTTTGATGCACAGTGGGGCTTATCTGAAATCAAATGATGGAAAGGAATTTGAAAATGGGGTTTTGA AATCAGAAGGACATGATATTGCTATAGGCCACGAAAAAAGAGAAGCACTTGATGACAAGTTTCTCGTTCTCAGATCCTTA GTTCCCTCTATAAACAAGTTCGATAGGACATCTCTCCTCAGTGACACGGTAGATTACTTGAAAGAGCTCGAGAGAAGAGT CGAAGAGCTAGAATCATGCAGGGAGTTTACAGAGTTTGAAACTATAGAGAAAAGGAAACACCCGGATATAGTAGAAAGGA CTTCTGATAATTACGGGTATAATGAAAATGCTAACAGTCCAAAGGCCGTGTTACACAAGAGAAAAGCTTGCGATATTGAT GAAATAGACCCTGAGCTAGATTCTGTGTCACCTAAAGACAATGTAGCAACATATGTTACAGTCTGCATGATTGAGAAAGA GGTTTTGGTTGAGATACGCTGTCCATGGAAAGATTGCTTAATCATCGAAATTATAGATGCAATAAGTAATCTCCATTTGG ATGCTCATTCAATTCAGTCTGCAGCAACTGAAGGCATTCTTACTCTAACCCTGAAATCTAAGTTCAAAGGAGCCGAAGTT GTATCAGCAGGAATGATCAAACAAGCAATTCAGAGAGTTATTGGTACCTGCTGA |