
Microexon ID | Pp_22:1994941-1994955:- |
Species | Physcomitrium patens | Coordinates | 22:1994941..1994955 |
Microexon Cluster ID | MEP42 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | bHLH-MYC_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AGTTCTAACATCCAG |
Microexon Amino Acid seq | SSNIQ |
Microexon-tag DNA Seq | GCCCATGAGCAGGAGACGGCAGTTTTCACACGCTCTCTTCCTGCCAAGAGTTCTAACATCCAGACGGTAGTCTGCATTCCTCTAAAGAATGGCGTCCTTGAATTCGGA |
Microexon-tag Amino Acid Seq | AHEQETAVFTRSLPAKSSNIQTVVCIPLKNGVLEFG |
Microexon-tag spanning region | 1994768-1995480 |
Microexon-tag prediction score | 0.8767 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Pp3c22_2930V3.1x |
Reference Transcript ID | Pp3c22_2930V3.1 |
Gene ID | Pp3c22_2930 |
Gene Name | NA |
Transcript ID | Pp3c22_2930V3.1 |
Protein ID | Pp3c22_2930V3.1 |
Gene ID | Pp3c22_2930 |
Gene Name | NA |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 2.4e-39 |
Motif start | 190 |
Motif end | 373 |
Protein seq | >Pp3c22_2930V3.1 MTLKCIFLKLLERAYRYVIRVSRRFDEVTYTRDMRLPFVACDVSNGILPCVKDAHTPCAERCRKSESANASRNRERGVEM WSRQSRWSCFLVWKIGVRLSNYFQHVVRLGVIKATAVSEDVSLRSCARVPSTCEVFADLYNRAGKPTHLDTSVYERNSTE EQTIGNSPHVKHFSASEIFTGMTPELPSKLRLQLQVATLEKNWTYSAFWKPAFVNQKKILVWGDGYYNGVIKTYKTIHGM ELTPKEFGLQRSQQLRDLCLTLDSRTRDQHASKPFALKVDDLADPEWFFLLSMIYDFAENEGMVGKTAARGQYTWLRQAH EQETAVFTRSLPAKSSNIQTVVCIPLKNGVLEFGTSEDVPDDSKLVQSILAFFMEPLNRTPSKNTVSSERKRVHSETTRQ KLVCAGHLSQLESSVARSPKRVKRSSFSTAETGEAIPLNNENIQMEPSCEGPRISNRCDEIKKDASRPNTFHAWKKNPAP LQKCLHPEKL* |
CDS seq | >Pp3c22_2930V3.1 ATGACTTTGAAGTGCATTTTTTTGAAATTGCTGGAGAGAGCTTACCGGTACGTCATTCGCGTATCCAGACGATTCGATGA AGTAACTTACACTCGCGATATGAGGTTGCCATTTGTCGCATGCGATGTGTCGAATGGAATACTGCCTTGTGTGAAAGATG CTCATACACCTTGTGCCGAACGCTGCAGGAAGAGCGAATCCGCGAACGCGTCGCGGAATCGAGAGCGTGGTGTGGAGATG TGGTCTAGGCAGTCGCGGTGGTCATGCTTCCTTGTTTGGAAGATAGGCGTCCGATTATCGAACTATTTCCAGCACGTTGT GAGGTTGGGCGTGATCAAAGCGACGGCGGTATCCGAAGATGTTAGTCTGAGGTCTTGCGCTCGCGTTCCTTCGACGTGCG AAGTCTTTGCGGATTTGTATAATCGTGCTGGAAAACCTACTCATTTAGACACATCTGTGTATGAGCGCAACTCGACAGAA GAACAAACAATCGGCAATTCACCTCATGTGAAGCACTTTTCGGCGAGTGAGATTTTCACAGGAATGACGCCGGAGTTGCC CTCAAAGTTGCGGCTCCAATTGCAAGTCGCTACCCTTGAGAAAAATTGGACATATTCCGCTTTTTGGAAGCCTGCCTTTG TGAATCAGAAGAAGATATTGGTCTGGGGTGATGGCTATTATAATGGAGTAATCAAAACATATAAAACCATTCACGGCATG GAGTTGACACCCAAAGAGTTTGGCTTGCAGCGTTCGCAGCAGCTCCGTGACCTCTGCCTTACATTAGATTCCCGTACCAG GGACCAGCATGCCAGTAAGCCGTTTGCGTTGAAAGTCGATGACCTTGCAGACCCCGAGTGGTTTTTCCTCCTGAGCATGA TCTACGATTTCGCTGAAAATGAAGGGATGGTAGGAAAAACAGCAGCAAGAGGCCAATATACATGGCTGCGCCAAGCCCAT GAGCAGGAGACGGCAGTTTTCACACGCTCTCTTCCTGCCAAGAGTTCTAACATCCAGACGGTAGTCTGCATTCCTCTAAA GAATGGCGTCCTTGAATTCGGAACATCAGAGGATGTGCCAGACGACTCAAAACTTGTGCAAAGTATTTTAGCCTTCTTTA TGGAGCCGTTGAACAGGACGCCCTCGAAAAATACTGTGTCTAGTGAGCGTAAGCGCGTTCATTCAGAGACCACTCGCCAG AAATTGGTTTGTGCGGGTCATCTCAGCCAACTTGAAAGTTCCGTTGCGAGGAGTCCCAAGAGGGTGAAGCGTTCCAGTTT TTCGACAGCTGAGACTGGGGAAGCGATCCCACTGAATAATGAGAACATCCAGATGGAACCATCTTGTGAGGGGCCTAGGA TATCTAATCGATGTGACGAAATCAAGAAGGATGCTTCGCGTCCGAACACATTTCATGCCTGGAAGAAAAATCCTGCACCC TTGCAGAAGTGTCTGCATCCTGAGAAACTGTAA |
Microexon DNA seq | AGTTCTAACATCCAG |
Microexon Amino Acid seq | SSNIQ |
Microexon-tag DNA Seq | GCCCATGAGCAGGAGACGGCAGTTTTCACACGCTCTCTTCCTGCCAAGAGTTCTAACATCCAGACGGTAGTCTGCATTCCTCTAAAGAATGGCGTCCTTGAATTCGGA |
Microexon-tag Amino Acid seq | AHEQETAVFTRSLPAKSSNIQTVVCIPLKNGVLEFG |
Transcript ID | Pp.14040.1 |
Gene ID | Pp.14040 |
Gene Name | NA |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 7.8e-40 |
Motif start | 9 |
Motif end | 192 |
Protein seq | >Pp.14040.1 MTPELPSKLRLQLQVATLEKNWTYSAFWKPAFVNQKKILVWGDGYYNGVIKTYKTIHGMELTPKEFGLQRSQQLRDLCLT LDSRTRDQHASKPFALKVDDLADPEWFFLLSMIYDFAENEGMVGKTAARGQYTWLRQAHEQETAVFTRSLPAKSSNIQTV VCIPLKNGVLEFGTSEDVPDDSKLVQSILAFFMEPLNRTPSKNTVSSERKRVHSETTRQKLVCAGHLSQLESSVARSPKR VKRSSFSTAETGEAIPLNNENIQMEPSCEGPRISNRCDEIKKDASRPNTFHAWKKNPAPLQKCLHPEKL* |
CDS seq | >Pp.14040.1 ATGACGCCGGAGTTGCCCTCAAAGTTGCGGCTCCAATTGCAAGTCGCTACCCTTGAGAAAAATTGGACATATTCCGCTTT TTGGAAGCCTGCCTTTGTGAATCAGAAGAAGATATTGGTCTGGGGTGATGGCTATTATAATGGAGTAATCAAAACATATA AAACCATTCACGGCATGGAGTTGACACCCAAAGAGTTTGGCTTGCAGCGTTCGCAGCAGCTCCGTGACCTCTGCCTTACA TTAGATTCCCGTACCAGGGACCAGCATGCCAGTAAGCCGTTTGCGTTGAAAGTCGATGACCTTGCAGACCCCGAGTGGTT TTTCCTCCTGAGCATGATCTACGATTTCGCTGAAAATGAAGGGATGGTAGGAAAAACAGCAGCAAGAGGCCAATATACAT GGCTGCGCCAAGCCCATGAGCAGGAGACGGCAGTTTTCACACGCTCTCTTCCTGCCAAGAGTTCTAACATCCAGACGGTA GTCTGCATTCCTCTAAAGAATGGCGTCCTTGAATTCGGAACATCAGAGGATGTGCCAGACGACTCAAAACTTGTGCAAAG TATTTTAGCCTTCTTTATGGAGCCGTTGAACAGGACGCCCTCGAAAAATACTGTGTCTAGTGAGCGTAAGCGCGTTCATT CAGAGACCACTCGCCAGAAATTGGTTTGTGCGGGTCATCTCAGCCAACTTGAAAGTTCCGTTGCGAGGAGTCCCAAGAGG GTGAAGCGTTCCAGTTTTTCGACAGCTGAGACTGGGGAAGCGATCCCACTGAATAATGAGAACATCCAGATGGAACCATC TTGTGAGGGGCCTAGGATATCTAATCGATGTGACGAAATCAAGAAGGATGCTTCGCGTCCGAACACATTTCATGCCTGGA AGAAAAATCCTGCACCCTTGCAGAAGTGTCTGCATCCTGAGAAACTGTAA |