
Microexon ID | Pp_21:9696233-9696247:+ |
Species | Physcomitrium patens | Coordinates | 21:9696233..9696247 |
Microexon Cluster ID | MEP42 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | bHLH-MYC_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AGTGCCTCCATTCAG |
Microexon Amino Acid seq | SASIQ |
Microexon-tag DNA Seq | ACCAATGAAATATCCACCAAACTTTTTACACGGGCTCTTCTTGCCAAGAGTGCCTCCATTCAGACGATTTTCTGCTTTCCTTTGATGGATGGCGTTGTAGAGTTCGGA |
Microexon-tag Amino Acid Seq | TNEISTKLFTRALLAKSASIQTIFCFPLMDGVVEFG |
Microexon-tag spanning region | 9695695-9696424 |
Microexon-tag prediction score | 0.8911 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Pp3c21_15150V3.1x |
Reference Transcript ID | Pp3c21_15150V3.1 |
Gene ID | Pp3c21_15150 |
Gene Name | NA |
Transcript ID | Pp3c21_15150V3.1 |
Protein ID | Pp3c21_15150V3.1 |
Gene ID | Pp3c21_15150 |
Gene Name | NA |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 1.4e-44 |
Motif start | 20 |
Motif end | 203 |
Protein seq | >Pp3c21_15150V3.1 MSGSKLEAIKEMTPLVPPELRLELQAATRAVKWTYSVFWKPASSNQKTLVWGDGYYNGTIKTRKTIGAKELTPEEFGLQR SQQLRDLYNSLSDSKTGHQQASKPFALKPEDLAEQEWFFLLCMSCNFAEGVGLVGRAAADGRYAWQCKTNEISTKLFTRA LLAKSASIQTIFCFPLMDGVVEFGTTEHVPEDSNIVQHVSSFFMERKRHSHPQHSVTTEQKHEHSKNSPQQSENVVHCNQ LAEYGASSKKAKLSSSQMAEVENETSMNRVNSLLDPTSQEQRTYTHLFQQNQGSDSRLYKGENRGKNQSGVLPGRVFSSW KKNSTPSQKSQKAENRQKILKEALFRVTRLYDGAWKNKVDSSFIFTDRAVEDRTSNLGSQKPVPSSEETSASHVLAERRR REKLNDRFVALRELIPNVSKMDKASILGVAIEYVKELQSQLRALESNNTQDGTPRQFGTANEDATITNTTREHLECAGVV HVIDEDKAATSECTITEESFKPGHVNVRVSMNNDVAIVKLHCPYRQTLLVDVLQSLNDLEFDVCGVRSSISDDILSTVLE AKLRSASDGSSPTIIEVEKTLHRAAAGLLKERASASSLQ* |
CDS seq | >Pp3c21_15150V3.1 ATGTCAGGTTCCAAATTAGAAGCGATAAAGGAAATGACGCCACTTGTGCCACCAGAGTTGCGGCTTGAATTGCAAGCCGC CACTCGTGCTGTTAAATGGACCTACTCCGTCTTCTGGAAGCCAGCGTCCAGTAATCAGAAAACTTTGGTCTGGGGTGATG GCTACTATAATGGAACCATCAAAACTCGAAAAACCATCGGTGCCAAGGAGTTGACGCCTGAGGAGTTCGGCTTGCAGCGT TCGCAGCAGCTCCGTGATCTCTACAACTCATTGTCCGACAGTAAAACTGGGCATCAGCAAGCTAGTAAGCCATTCGCGTT GAAGCCCGAGGATCTTGCAGAACAAGAGTGGTTCTTCCTCCTGTGCATGTCCTGCAATTTCGCTGAGGGTGTAGGGTTGG TAGGAAGAGCAGCAGCAGATGGACGATACGCGTGGCAATGCAAAACCAATGAAATATCCACCAAACTTTTTACACGGGCT CTTCTTGCCAAGAGTGCCTCCATTCAGACGATTTTCTGCTTTCCTTTGATGGATGGCGTTGTAGAGTTCGGAACAACAGA ACATGTACCAGAGGACTCGAATATAGTGCAACATGTTTCGTCTTTTTTCATGGAACGAAAAAGGCATAGCCACCCACAGC ATTCCGTGACCACTGAGCAAAAGCACGAGCATTCGAAGAACAGTCCTCAGCAATCGGAAAATGTGGTTCACTGTAACCAA CTTGCAGAATATGGCGCAAGCTCGAAGAAGGCCAAGCTTTCCAGCTCTCAAATGGCAGAGGTTGAGAATGAAACATCTAT GAACAGAGTAAATAGCCTATTGGATCCGACTAGTCAGGAACAAAGGACATATACACACCTCTTTCAGCAAAACCAGGGCA GTGATTCAAGGCTGTATAAAGGAGAAAATCGGGGGAAAAATCAATCGGGTGTTTTACCTGGGAGAGTATTTAGTTCGTGG AAGAAAAACTCAACGCCTTCTCAGAAATCGCAGAAGGCTGAAAATCGGCAAAAGATTCTGAAAGAGGCTTTGTTTCGTGT CACTCGCCTCTACGATGGTGCGTGGAAGAATAAAGTAGACAGCAGCTTTATATTTACTGACCGCGCTGTTGAGGATAGGA CCTCTAACTTGGGATCTCAAAAACCAGTACCAAGCTCCGAAGAAACATCCGCTAGCCATGTACTAGCTGAGCGTCGAAGG CGGGAGAAACTGAACGACAGATTCGTGGCATTGCGTGAGCTCATTCCTAATGTTTCCAAGATGGATAAAGCATCCATTCT TGGAGTTGCTATTGAATACGTGAAGGAGCTTCAGAGCCAACTCAGAGCTTTGGAGAGTAACAACACGCAGGATGGAACAC CGAGACAATTTGGAACAGCAAATGAGGATGCAACGATCACCAATACCACCAGAGAGCACTTGGAGTGTGCTGGTGTTGTG CACGTAATAGACGAGGACAAGGCAGCAACGTCCGAATGTACGATTACTGAAGAAAGCTTCAAACCTGGGCACGTCAATGT GCGGGTTTCTATGAATAACGATGTAGCTATTGTCAAGCTCCATTGCCCTTACCGACAAACGCTGCTTGTCGACGTGCTGC AGTCACTCAATGATCTCGAGTTTGACGTATGTGGTGTGAGGTCTTCCATATCAGATGACATTCTTTCTACTGTCTTGGAA GCTAAGCTGAGAAGTGCTTCTGATGGCTCAAGTCCAACTATCATCGAGGTGGAAAAGACCTTGCATCGAGCTGCTGCAGG ACTCTTGAAAGAACGAGCCAGTGCTTCTTCACTTCAATGA |
Microexon DNA seq | AGTGCCTCCATTCAG |
Microexon Amino Acid seq | SASIQ |
Microexon-tag DNA Seq | ACCAATGAAATATCCACCAAACTTTTTACACGGGCTCTTCTTGCCAAGAGTGCCTCCATTCAGACGATTTTCTGCTTTCCTTTGATGGATGGCGTTGTAGAGTTCGGA |
Microexon-tag Amino Acid seq | TNEISTKLFTRALLAKSASIQTIFCFPLMDGVVEFG |
Transcript ID | Pp.13688.2 |
Gene ID | Pp.13688 |
Gene Name | NA |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 2.9e-45 |
Motif start | 20 |
Motif end | 203 |
Protein seq | >Pp.13688.2 MSGSKLEAIKEMTPLVPPELRLELQAATRAVKWTYSVFWKPASSNQKTLVWGDGYYNGTIKTRKTIGAKELTPEEFGLQR SQQLRDLYNSLSDSKTGHQQASKPFALKPEDLAEQEWFFLLCMSCNFAEGVGLVGRAAADGRYAWQCKTNEISTKLFTRA LLAKSASIQTIFCFPLMDGVVEFGTTEHVPEDSNIVQHVSSFFMERKRHSHPQHSVTTEQKHEHSKNSPQQSENVVHCNQ LAEYGASSKKAKLSSSQMAEVENETSMNRVNSLLDPTSQEQRTYTHLFQQNQALWAPSLTSLISPTF* |
CDS seq | >Pp.13688.2 ATGTCAGGTTCCAAATTAGAAGCGATAAAGGAAATGACGCCACTTGTGCCACCAGAGTTGCGGCTTGAATTGCAAGCCGC CACTCGTGCTGTTAAATGGACCTACTCCGTCTTCTGGAAGCCAGCGTCCAGTAATCAGAAAACTTTGGTCTGGGGTGATG GCTACTATAATGGAACCATCAAAACTCGAAAAACCATCGGTGCCAAGGAGTTGACGCCTGAGGAGTTCGGCTTGCAGCGT TCGCAGCAGCTCCGTGATCTCTACAACTCATTGTCCGACAGTAAAACTGGGCATCAGCAAGCTAGTAAGCCATTCGCGTT GAAGCCCGAGGATCTTGCAGAACAAGAGTGGTTCTTCCTCCTGTGCATGTCCTGCAATTTCGCTGAGGGTGTAGGGTTGG TAGGAAGAGCAGCAGCAGATGGACGATACGCGTGGCAATGCAAAACCAATGAAATATCCACCAAACTTTTTACACGGGCT CTTCTTGCCAAGAGTGCCTCCATTCAGACGATTTTCTGCTTTCCTTTGATGGATGGCGTTGTAGAGTTCGGAACAACAGA ACATGTACCAGAGGACTCGAATATAGTGCAACATGTTTCGTCTTTTTTCATGGAACGAAAAAGGCATAGCCACCCACAGC ATTCCGTGACCACTGAGCAAAAGCACGAGCATTCGAAGAACAGTCCTCAGCAATCGGAAAATGTGGTTCACTGTAACCAA CTTGCAGAATATGGCGCAAGCTCGAAGAAGGCCAAGCTTTCCAGCTCTCAAATGGCAGAGGTTGAGAATGAAACATCTAT GAACAGAGTAAATAGCCTATTGGATCCGACTAGTCAGGAACAAAGGACATATACACACCTCTTTCAGCAAAACCAGGCAC TTTGGGCACCAAGCCTCACGAGCTTGATCTCTCCTACTTTTTGA |