
Microexon ID | Pp_11:10087967-10087981:- |
Species | Physcomitrium patens | Coordinates | 11:10087967..10087981 |
Microexon Cluster ID | MEP42 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | bHLH-MYC_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Pp_11:10087967-10087981:- does not have available information here.
Transcript ID | Pp3c11_15370V3.1 |
Protein ID | Pp3c11_15370V3.1 |
Gene ID | Pp3c11_15370 |
Gene Name | NA |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 2.3e-54 |
Motif start | 51 |
Motif end | 228 |
Protein seq | >Pp3c11_15370V3.1 MEMSQLLNAWEVADSAMIEAFMGTGYNCVEGFEVQDDPDGQLHLNESVLLRRLHSLVEESTVDWTYAIFWQLSALREGEM MLGWGDGYFRSAKENEINDARNMKGGSQEEDQQMRRKVLRELQALVNGSEDDVSDYVTDTEWFYLVSMSHSYAAGVGTPG RALASDRPVWLIGANKAPDNNCSRVQLAKMAGIQTILCIPSKSGVVELGSTDLIRESWEVVQNVKMVFDEPMMWAAHEIQ AVAHSLPLSSDATSMRPSSPSLMSIATISASISNASQIGRCSNPSQDHEAHFVGRKNPPSSRPPMRFYKPRVEELSSDTP ETNLVDNKYIVGKSVSFHHLSKIGQRGMPGPPTTANRLPCFAPSEVDCHESEADVSVKENVVESSTNLEPKPRKRGRKPA NDREEPLNHVQAERQRREKLNQKFYALRSVVPNVSKMDKASLLEDAITYINELQEKLQKAEAELKVFQRQVLASTGESKK PNPSRRDSTESSDEERFRLQESD* |
CDS seq | >Pp3c11_15370V3.1 ATGGAAATGTCGCAGTTATTGAATGCGTGGGAAGTAGCGGACTCAGCTATGATCGAGGCGTTCATGGGAACGGGGTATAA CTGCGTGGAAGGCTTCGAAGTGCAGGATGATCCGGACGGGCAGCTCCACTTGAACGAGTCGGTGTTGCTGCGGAGGCTGC ACTCGCTGGTCGAAGAGAGTACCGTGGATTGGACGTATGCAATCTTTTGGCAGCTGTCAGCCTTACGTGAAGGGGAGATG ATGCTCGGTTGGGGTGATGGGTACTTCAGGAGTGCTAAGGAGAATGAAATCAACGACGCGAGGAACATGAAGGGTGGTTC TCAAGAGGAGGATCAACAGATGAGGCGAAAGGTGTTGCGAGAGCTGCAGGCTCTAGTCAATGGCTCTGAAGATGATGTTA GCGACTATGTCACGGATACGGAATGGTTTTACCTTGTTTCGATGTCTCATTCTTATGCAGCCGGAGTGGGGACTCCTGGA CGAGCATTAGCATCTGACAGACCTGTGTGGCTAATTGGAGCGAACAAAGCTCCTGATAATAACTGCAGTCGTGTTCAATT GGCTAAGATGGCTGGAATTCAGACAATCCTTTGTATTCCGTCGAAATCTGGTGTCGTTGAGCTTGGATCGACAGATCTGA TCAGAGAAAGCTGGGAAGTTGTTCAGAATGTCAAGATGGTTTTTGATGAACCAATGATGTGGGCAGCCCATGAAATCCAA GCGGTGGCGCATTCCTTGCCTTTGAGTAGCGACGCGACTAGTATGCGACCGTCAAGCCCAAGTCTTATGTCAATAGCAAC AATAAGTGCTTCAATTTCAAATGCAAGTCAGATTGGCAGATGTTCAAATCCAAGTCAAGATCATGAAGCACATTTTGTTG GAAGGAAGAATCCACCCTCGTCAAGACCCCCGATGAGGTTCTACAAACCACGGGTGGAAGAATTGAGCTCGGACACTCCA GAAACAAACTTGGTTGATAATAAATATATTGTAGGGAAGTCAGTATCTTTCCACCACCTTTCTAAGATAGGTCAGAGAGG AATGCCTGGACCTCCTACCACTGCAAATAGGTTACCATGTTTCGCTCCGTCCGAGGTAGATTGTCATGAATCAGAAGCCG ACGTTTCCGTCAAAGAAAATGTTGTGGAATCAAGTACAAATCTCGAGCCTAAACCACGCAAAAGAGGGCGCAAGCCGGCA AACGATAGGGAAGAGCCACTAAATCATGTGCAAGCTGAACGGCAGCGGCGAGAAAAACTCAATCAGAAATTTTATGCTCT ACGGTCTGTAGTGCCAAACGTGTCCAAGATGGATAAGGCATCCTTATTAGAAGATGCCATTACCTACATTAATGAGCTTC AAGAAAAGCTACAAAAAGCAGAGGCTGAATTGAAGGTTTTCCAAAGGCAAGTGCTTGCATCAACTGGCGAATCTAAAAAA CCTAATCCATCTCGCAGGGATTCGACCGAAAGTTCTGATGAAGAACGTTTCAGACTTCAAGAGAGTGATTGA |
Microexon DNA seq | ATGGCTGGAATTCAG |
Microexon Amino Acid seq | MAGIQ |
Microexon-tag DNA Seq | GCGAACAAAGCTCCTGATAATAACTGCAGTCGTGTTCAATTGGCTAAGATGGCTGGAATTCAGACAATCCTTTGTATTCCGTCGAAATCTGGTGTCGTTGAGCTTGGA |
Microexon-tag Amino Acid seq | ANKAPDNNCSRVQLAKMAGIQTILCIPSKSGVVELG |
Transcript ID | Pp3c11_15370V3.2 |
Gene ID | Pp.3136 |
Gene Name | NA |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 2.3e-54 |
Motif start | 51 |
Motif end | 228 |
Protein seq | >Pp3c11_15370V3.2 MEMSQLLNAWEVADSAMIEAFMGTGYNCVEGFEVQDDPDGQLHLNESVLLRRLHSLVEESTVDWTYAIFWQLSALREGEM MLGWGDGYFRSAKENEINDARNMKGGSQEEDQQMRRKVLRELQALVNGSEDDVSDYVTDTEWFYLVSMSHSYAAGVGTPG RALASDRPVWLIGANKAPDNNCSRVQLAKMAGIQTILCIPSKSGVVELGSTDLIRESWEVVQNVKMVFDEPMMWAAHEIQ AVAHSLPLSSDATSMRPSSPSLMSIATISASISNASQIGRCSNPSQDHEAHFVGRKNPPSSRPPMRFYKPRVEELSSDTP ETNLVDNKYIVGKSVSFHHLSKIGQRGMPGPPTTANRLPCFAPSEVDCHESEADVSVKENVVESSTNLEPKPRKRGRKPA NDREEPLNHVQAERQRREKLNQKFYALRSVVPNVSKMDKASLLEDAITYINELQEKLQKAEAELKVFQRQVLASTGESKK PNPSRRDSTESSDEERFRLQESD* |
CDS seq | >Pp3c11_15370V3.2 ATGGAAATGTCGCAGTTATTGAATGCGTGGGAAGTAGCGGACTCAGCTATGATCGAGGCGTTCATGGGAACGGGGTATAA CTGCGTGGAAGGCTTCGAAGTGCAGGATGATCCGGACGGGCAGCTCCACTTGAACGAGTCGGTGTTGCTGCGGAGGCTGC ACTCGCTGGTCGAAGAGAGTACCGTGGATTGGACGTATGCAATCTTTTGGCAGCTGTCAGCCTTACGTGAAGGGGAGATG ATGCTCGGTTGGGGTGATGGGTACTTCAGGAGTGCTAAGGAGAATGAAATCAACGACGCGAGGAACATGAAGGGTGGTTC TCAAGAGGAGGATCAACAGATGAGGCGAAAGGTGTTGCGAGAGCTGCAGGCTCTAGTCAATGGCTCTGAAGATGATGTTA GCGACTATGTCACGGATACGGAATGGTTTTACCTTGTTTCGATGTCTCATTCTTATGCAGCCGGAGTGGGGACTCCTGGA CGAGCATTAGCATCTGACAGACCTGTGTGGCTAATTGGAGCGAACAAAGCTCCTGATAATAACTGCAGTCGTGTTCAATT GGCTAAGATGGCTGGAATTCAGACAATCCTTTGTATTCCGTCGAAATCTGGTGTCGTTGAGCTTGGATCGACAGATCTGA TCAGAGAAAGCTGGGAAGTTGTTCAGAATGTCAAGATGGTTTTTGATGAACCAATGATGTGGGCAGCCCATGAAATCCAA GCGGTGGCGCATTCCTTGCCTTTGAGTAGCGACGCGACTAGTATGCGACCGTCAAGCCCAAGTCTTATGTCAATAGCAAC AATAAGTGCTTCAATTTCAAATGCAAGTCAGATTGGCAGATGTTCAAATCCAAGTCAAGATCATGAAGCACATTTTGTTG GAAGGAAGAATCCACCCTCGTCAAGACCCCCGATGAGGTTCTACAAACCACGGGTGGAAGAATTGAGCTCGGACACTCCA GAAACAAACTTGGTTGATAATAAATATATTGTAGGGAAGTCAGTATCTTTCCACCACCTTTCTAAGATAGGTCAGAGAGG AATGCCTGGACCTCCTACCACTGCAAATAGGTTACCATGTTTCGCTCCGTCCGAGGTAGATTGTCATGAATCAGAAGCCG ACGTTTCCGTCAAAGAAAATGTTGTGGAATCAAGTACAAATCTCGAGCCTAAACCACGCAAAAGAGGGCGCAAGCCGGCA AACGATAGGGAAGAGCCACTAAATCATGTGCAAGCTGAACGGCAGCGGCGAGAAAAACTCAATCAGAAATTTTATGCTCT ACGGTCTGTAGTGCCAAACGTGTCCAAGATGGATAAGGCATCCTTATTAGAAGATGCCATTACCTACATTAATGAGCTTC AAGAAAAGCTACAAAAAGCAGAGGCTGAATTGAAGGTTTTCCAAAGGCAAGTGCTTGCATCAACTGGCGAATCTAAAAAA CCTAATCCATCTCGCAGGGATTCGACCGAAAGTTCTGATGAAGAACGTTTCAGACTTCAAGAGAGTGATTGA |