
Microexon ID | Os_4:27886137-27886151:- |
Species | Oryza sativa | Coordinates | 4:27886137..27886151 |
Microexon Cluster ID | MEP42 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | bHLH-MYC_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AGCGCGTCTATTCAG |
Microexon Amino Acid seq | SASIQ |
Microexon-tag DNA Seq | GCTCAGTCTGCAGATAGCAAAACATTTCTACGCTCGCTATTAGCTAAGAGCGCGTCTATTCAGACAATCATCTGCATCCCCTTCACGAGTGGCGTGCTTGAGCTGGGG |
Microexon-tag Amino Acid Seq | AQSADSKTFLRSLLAKSASIQTIICIPFTSGVLELG |
Microexon-tag spanning region | 27885753-27886398 |
Microexon-tag prediction score | 0.92 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os04t0557200-01x |
Reference Transcript ID | Os04t0557200-01 |
Gene ID | Os04g0557200 |
Gene Name | OsbHLH015 |
Transcript ID | Os04t0557200-01 |
Protein ID | Os04t0557200-01 |
Gene ID | Os04g0557200 |
Gene Name | OsbHLH015 |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 3.6e-49 |
Motif start | 21 |
Motif end | 202 |
Protein seq | >Os04t0557200-01 MASAPPVQEEPLQPGTNHFRSLLAAAVRSISWSYAIFWSISTSCPGVLTWNDGFYNGVVKTRKISNSADLTAGQLVVQRS EQLRELYYSLLSGECDHRARRPIAALSPEDLADTEWYYVVCMTYSFQPGQGLPGKSYASNASVWLRNAQSADSKTFLRSL LAKSASIQTIICIPFTSGVLELGTTDPVLEDPKLVNRIVAYFQELQFPICLEVLMSTSPSPNETEDADIVSEGLITHNAI EEGQMVVSDECVSNANRDPITMEIDELYSIYEDLDLDMDLDLDTVRFLEDNGWPVNPSSFQLVPASSTEAVAAAAAANDV DGVANSQVSCFMAWKSAKSNEMAVPVVTGIESQKLLKKVVDCGARMSTGRGSRAALTQESGIKNHVISERRRREKLNEMF LILKSIVPSIHKVDKASILEETIAYLKVLEKRVKELESSSEPSHQRATETGQQRRCEITGKELVSEIGVSGGGDAGREHH HVNVTVTDKVVLLEVQCRWKELVMTRVFDAIKSLCLDVLSVQASAPDGLLGLKIQAKFACSGSVAPGMISEALQKAIGG* |
CDS seq | >Os04t0557200-01 ATGGCATCTGCTCCTCCAGTTCAGGAAGAACCCCTACAGCCAGGGACGAACCACTTCAGGAGCCTGCTTGCTGCTGCTGT GAGGAGCATCAGTTGGAGTTATGCGATCTTTTGGTCCATTTCAACCAGTTGCCCAGGAGTTTTGACTTGGAATGATGGGT TCTACAACGGCGTGGTAAAGACGAGGAAGATATCCAACTCAGCAGACCTCACGGCTGGTCAGCTCGTCGTGCAGAGAAGC GAGCAACTGAGGGAGCTTTACTACTCTCTCCTGTCCGGCGAGTGCGACCACCGGGCGAGGAGGCCCATTGCCGCGCTATC GCCGGAAGATCTCGCAGACACAGAATGGTACTACGTCGTCTGCATGACCTACTCCTTCCAACCCGGCCAAGGGCTGCCAG GCAAAAGCTATGCAAGCAATGCATCTGTTTGGCTGCGCAATGCTCAGTCTGCAGATAGCAAAACATTTCTACGCTCGCTA TTAGCTAAGAGCGCGTCTATTCAGACAATCATCTGCATCCCCTTCACGAGTGGCGTGCTTGAGCTGGGGACCACTGATCC GGTTTTGGAGGACCCAAAGTTGGTAAACCGAATCGTTGCATATTTCCAGGAGCTTCAGTTTCCGATATGCTTAGAGGTAC TAATGAGCACTAGCCCTTCTCCGAACGAAACGGAAGATGCCGACATCGTGTCCGAAGGCCTCATCACTCACAACGCCATC GAAGAGGGGCAGATGGTTGTCTCTGATGAGTGCGTGTCCAACGCCAACCGCGATCCAATCACCATGGAGATCGACGAGCT CTACAGCATCTACGAGGACCTGGACCTGGACATGGACCTGGACCTGGACACCGTGCGCTTTCTCGAGGATAATGGCTGGC CTGTGAACCCCAGCTCTTTTCAACTGGTCCCGGCGTCGTCAACGGAGGCGGTGGCGGCGGCGGCGGCGGCTAATGATGTC GACGGTGTTGCGAATTCTCAAGTGTCGTGCTTCATGGCTTGGAAGAGCGCGAAGTCAAACGAGATGGCTGTGCCGGTCGT CACCGGTATAGAGTCACAGAAGTTGCTGAAGAAAGTTGTGGACTGTGGTGCACGGATGAGCACTGGTCGTGGTAGTAGAG CAGCGCTAACTCAAGAGAGTGGCATCAAGAACCATGTCATATCAGAGAGAAGGCGCCGAGAGAAGCTCAATGAGATGTTC CTGATTCTGAAGTCAATAGTCCCCTCCATCCACAAGGTGGACAAAGCATCCATCCTTGAAGAAACGATTGCCTACCTCAA AGTGTTGGAGAAAAGGGTGAAAGAGTTGGAGTCCAGCAGCGAGCCATCACATCAGCGCGCAACCGAAACAGGACAGCAAA GGCGCTGTGAGATCACCGGGAAGGAGCTGGTCTCTGAGATCGGTGTCAGCGGCGGCGGCGATGCAGGGAGAGAACACCAC CACGTGAATGTCACCGTCACGGACAAGGTGGTTCTCCTGGAGGTGCAGTGCCGATGGAAGGAGTTGGTGATGACACGAGT GTTCGACGCGATCAAGAGCCTCTGTCTTGACGTTCTCTCCGTGCAGGCGTCGGCACCGGATGGTCTTCTTGGACTGAAGA TACAAGCTAAGTTTGCTTGTTCTGGTTCAGTGGCACCTGGGATGATCAGCGAAGCTCTCCAGAAAGCTATCGGTGGCTAG |
Os_4:27886137-27886151:- does not have available information here.