Microexon ID Os_4:27886137-27886151:-
Species Oryza sativa
Coordinates 4:27886137..27886151
Microexon Cluster ID MEP42
Size 15
Phase 0
Pfam Domain Motif bHLH-MYC_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,15,45
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq AGCGCGTCTATTCAG
Microexon Amino Acid seq SASIQ
Microexon-tag DNA Seq GCTCAGTCTGCAGATAGCAAAACATTTCTACGCTCGCTATTAGCTAAGAGCGCGTCTATTCAGACAATCATCTGCATCCCCTTCACGAGTGGCGTGCTTGAGCTGGGG
Microexon-tag Amino Acid Seq AQSADSKTFLRSLLAKSASIQTIICIPFTSGVLELG
Microexon-tag spanning region27885753-27886398
Microexon-tag prediction score0.92
Overlapped with the annotated transcript (%) 100
New Transcript ID Os04t0557200-01x
Reference Transcript ID Os04t0557200-01
Gene ID Os04g0557200
Gene Name OsbHLH015
Transcript ID Os04t0557200-01
Protein ID Os04t0557200-01
Gene ID Os04g0557200
Gene Name OsbHLH015
Pfam domain motif bHLH-MYC_N
Motif E-value 3.6e-49
Motif start 21
Motif end 202
Protein seq >Os04t0557200-01
MASAPPVQEEPLQPGTNHFRSLLAAAVRSISWSYAIFWSISTSCPGVLTWNDGFYNGVVKTRKISNSADLTAGQLVVQRS
EQLRELYYSLLSGECDHRARRPIAALSPEDLADTEWYYVVCMTYSFQPGQGLPGKSYASNASVWLRNAQSADSKTFLRSL
LAKSASIQTIICIPFTSGVLELGTTDPVLEDPKLVNRIVAYFQELQFPICLEVLMSTSPSPNETEDADIVSEGLITHNAI
EEGQMVVSDECVSNANRDPITMEIDELYSIYEDLDLDMDLDLDTVRFLEDNGWPVNPSSFQLVPASSTEAVAAAAAANDV
DGVANSQVSCFMAWKSAKSNEMAVPVVTGIESQKLLKKVVDCGARMSTGRGSRAALTQESGIKNHVISERRRREKLNEMF
LILKSIVPSIHKVDKASILEETIAYLKVLEKRVKELESSSEPSHQRATETGQQRRCEITGKELVSEIGVSGGGDAGREHH
HVNVTVTDKVVLLEVQCRWKELVMTRVFDAIKSLCLDVLSVQASAPDGLLGLKIQAKFACSGSVAPGMISEALQKAIGG*
CDS seq >Os04t0557200-01
ATGGCATCTGCTCCTCCAGTTCAGGAAGAACCCCTACAGCCAGGGACGAACCACTTCAGGAGCCTGCTTGCTGCTGCTGT
GAGGAGCATCAGTTGGAGTTATGCGATCTTTTGGTCCATTTCAACCAGTTGCCCAGGAGTTTTGACTTGGAATGATGGGT
TCTACAACGGCGTGGTAAAGACGAGGAAGATATCCAACTCAGCAGACCTCACGGCTGGTCAGCTCGTCGTGCAGAGAAGC
GAGCAACTGAGGGAGCTTTACTACTCTCTCCTGTCCGGCGAGTGCGACCACCGGGCGAGGAGGCCCATTGCCGCGCTATC
GCCGGAAGATCTCGCAGACACAGAATGGTACTACGTCGTCTGCATGACCTACTCCTTCCAACCCGGCCAAGGGCTGCCAG
GCAAAAGCTATGCAAGCAATGCATCTGTTTGGCTGCGCAATGCTCAGTCTGCAGATAGCAAAACATTTCTACGCTCGCTA
TTAGCTAAGAGCGCGTCTATTCAGACAATCATCTGCATCCCCTTCACGAGTGGCGTGCTTGAGCTGGGGACCACTGATCC
GGTTTTGGAGGACCCAAAGTTGGTAAACCGAATCGTTGCATATTTCCAGGAGCTTCAGTTTCCGATATGCTTAGAGGTAC
TAATGAGCACTAGCCCTTCTCCGAACGAAACGGAAGATGCCGACATCGTGTCCGAAGGCCTCATCACTCACAACGCCATC
GAAGAGGGGCAGATGGTTGTCTCTGATGAGTGCGTGTCCAACGCCAACCGCGATCCAATCACCATGGAGATCGACGAGCT
CTACAGCATCTACGAGGACCTGGACCTGGACATGGACCTGGACCTGGACACCGTGCGCTTTCTCGAGGATAATGGCTGGC
CTGTGAACCCCAGCTCTTTTCAACTGGTCCCGGCGTCGTCAACGGAGGCGGTGGCGGCGGCGGCGGCGGCTAATGATGTC
GACGGTGTTGCGAATTCTCAAGTGTCGTGCTTCATGGCTTGGAAGAGCGCGAAGTCAAACGAGATGGCTGTGCCGGTCGT
CACCGGTATAGAGTCACAGAAGTTGCTGAAGAAAGTTGTGGACTGTGGTGCACGGATGAGCACTGGTCGTGGTAGTAGAG
CAGCGCTAACTCAAGAGAGTGGCATCAAGAACCATGTCATATCAGAGAGAAGGCGCCGAGAGAAGCTCAATGAGATGTTC
CTGATTCTGAAGTCAATAGTCCCCTCCATCCACAAGGTGGACAAAGCATCCATCCTTGAAGAAACGATTGCCTACCTCAA
AGTGTTGGAGAAAAGGGTGAAAGAGTTGGAGTCCAGCAGCGAGCCATCACATCAGCGCGCAACCGAAACAGGACAGCAAA
GGCGCTGTGAGATCACCGGGAAGGAGCTGGTCTCTGAGATCGGTGTCAGCGGCGGCGGCGATGCAGGGAGAGAACACCAC
CACGTGAATGTCACCGTCACGGACAAGGTGGTTCTCCTGGAGGTGCAGTGCCGATGGAAGGAGTTGGTGATGACACGAGT
GTTCGACGCGATCAAGAGCCTCTGTCTTGACGTTCTCTCCGTGCAGGCGTCGGCACCGGATGGTCTTCTTGGACTGAAGA
TACAAGCTAAGTTTGCTTGTTCTGGTTCAGTGGCACCTGGGATGATCAGCGAAGCTCTCCAGAAAGCTATCGGTGGCTAG
Os_4:27886137-27886151:- does not have available information here.