
Microexon ID | Ha_6:4559285-4559299:+ |
Species | Helianthus annuus | Coordinates | 6:4559285..4559299 |
Microexon Cluster ID | MEP42 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | bHLH-MYC_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AGTGCATCAATTCAG |
Microexon Amino Acid seq | SASIQ |
Microexon-tag DNA Seq | GCTCACCTTGCCGATAGCAAAGTCTTCAGCCGCTCTCTTCTAGCAAAAAGTGCATCAATTCAGACCGTAGTATGCTTTCCATATTTAGAAGGTCTTGTTGAGTTCGGC |
Microexon-tag Amino Acid Seq | AHLADSKVFSRSLLAKSASIQTVVCFPYLEGLVEFG |
Microexon-tag spanning region | 4559125-4559440 |
Microexon-tag prediction score | 0.9456 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OTG21925x |
Reference Transcript ID | OTG21925 |
Gene ID | HannXRQ_Chr06g0165851 |
Gene Name | GL3 |
Transcript ID | OTG21925 |
Protein ID | OTG21925 |
Gene ID | HannXRQ_Chr06g0165851 |
Gene Name | GL3 |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 1.5e-45 |
Motif start | 7 |
Motif end | 202 |
Protein seq | >OTG21925 MAAKEHLRRKLAMAVKSINWSYAIFWSISSTEPGVLTWCDGYYNGGIKTRKTIQADEMEEEEEEDGGDDDEAGLRRTEQL RQLYESLSIASESHGYDPQPRRPPAALSPEDLTDAEWYFLVCMTYEFTNGQGLPGRTLAKNTVSWLSDAHLADSKVFSRS LLAKSASIQTVVCFPYLEGLVEFGVAEKVLEEQNIVKQIKDLLFDVPSQKVREIPLESCSNMLDHHDIVINNLDNMLEYD QNQEQSWRFVDDDDDDEGEISFHQNNSMGSSDCISQNLASGHGDVWSDVDDRYHCVLLRIFKNTPRLVLGPRFRNCDSKE SAFVSWKNCDGMESNGSCSQVLLKSVLYKVPKMHENRLVWSRCEDGNVDRMMKLEDDEVKDIDHRFSVLSALVPSRGKVD KVSLLDDTIDYLKTLERKVESLQSDRKSHDVRERTCDNYCNKRKASCDPTDLQEERFSDCITVSAIEKDVTIEIRCRWRD NMIVQVFDAMSSLNLESHSVHSYTVDGILTLTIESKLKSCTGSTAKMIRQALQRVIGSKFGVD* |
CDS seq | >OTG21925 ATGGCTGCAAAGGAACACTTAAGAAGAAAACTGGCTATGGCTGTCAAAAGCATTAACTGGAGCTATGCAATCTTCTGGTC CATTTCTTCAACAGAACCAGGGGTATTGACATGGTGTGATGGATACTACAATGGAGGCATCAAAACAAGGAAAACAATAC AAGCAGATGAAATGGAAGAAGAAGAAGAAGAAGATGGCGGTGATGATGATGAAGCGGGATTGCGAAGGACCGAGCAATTA AGACAACTTTATGAATCACTTTCCATAGCTTCCGAATCACACGGTTATGATCCACAACCGAGAAGGCCCCCAGCTGCATT ATCCCCTGAAGATCTCACGGACGCCGAGTGGTATTTCTTAGTTTGCATGACATATGAGTTCACTAATGGTCAAGGATTGC CAGGAAGAACATTGGCAAAGAACACAGTTAGTTGGCTGTCTGATGCTCACCTTGCCGATAGCAAAGTCTTCAGCCGCTCT CTTCTAGCAAAAAGTGCATCAATTCAGACCGTAGTATGCTTTCCATATTTAGAAGGTCTTGTTGAGTTCGGCGTAGCAGA GAAGGTTTTAGAAGAACAAAACATCGTTAAACAGATTAAAGATTTACTCTTTGATGTTCCATCGCAAAAAGTTCGTGAAA TACCCTTAGAAAGTTGTTCCAACATGCTTGATCATCATGATATAGTCATCAACAATCTCGACAACATGCTTGAATACGAT CAAAATCAAGAACAAAGTTGGCGGTTTGTGGATGATGATGATGACGACGAAGGAGAGATTAGTTTCCACCAAAATAATTC CATGGGTTCGAGTGATTGTATATCTCAAAACTTAGCAAGTGGTCATGGCGATGTTTGGAGCGACGTCGATGATCGCTATC ATTGTGTTCTTTTGAGGATATTCAAGAACACCCCGAGATTGGTTTTGGGACCTCGTTTTAGAAACTGCGATTCGAAAGAG TCTGCTTTTGTTAGCTGGAAAAATTGTGATGGAATGGAATCGAACGGAAGTTGTTCACAAGTGTTATTAAAAAGTGTGCT TTATAAAGTCCCGAAAATGCACGAAAACCGCTTAGTTTGGTCTCGATGTGAAGATGGAAATGTGGATCGAATGATGAAAC TCGAAGATGACGAAGTGAAGGATATTGATCATAGGTTTTCGGTGCTAAGCGCATTGGTCCCTTCTAGAGGAAAGGTTGAC AAAGTGTCTCTACTCGATGACACTATCGACTACTTAAAAACTCTGGAGAGAAAGGTGGAATCGTTACAATCCGACAGAAA ATCTCATGATGTGCGAGAAAGAACGTGTGATAACTATTGCAACAAACGAAAAGCATCTTGCGATCCTACAGATTTACAAG AAGAACGTTTTTCGGATTGTATCACAGTCAGCGCGATAGAAAAAGATGTGACGATTGAGATACGATGTAGGTGGCGAGAT AACATGATAGTTCAAGTGTTTGATGCAATGAGCAGCCTAAACTTGGAATCTCATTCTGTTCATTCATATACTGTTGATGG AATTCTCACATTAACCATTGAATCAAAGTTAAAGAGTTGTACAGGATCAACAGCAAAGATGATCAGGCAGGCACTTCAAA GAGTAATTGGTAGTAAATTTGGTGTAGATTAG |
Microexon DNA seq | AGTGCATCAATTCAG |
Microexon Amino Acid seq | SASIQ |
Microexon-tag DNA Seq | GCTCACCTTGCCGATAGCAAAGTCTTCAGCCGCTCTCTTCTAGCAAAAAGTGCATCAATTCAGACCGTAGTATGCTTTCCATATTTAGAAGGTCTTGTTGAGTTCGGC |
Microexon-tag Amino Acid seq | AHLADSKVFSRSLLAKSASIQTVVCFPYLEGLVEFG |
Transcript ID | OTG21925 |
Gene ID | Ha.47104 |
Gene Name | GL3 |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 1.5e-45 |
Motif start | 7 |
Motif end | 202 |
Protein seq | >OTG21925 MAAKEHLRRKLAMAVKSINWSYAIFWSISSTEPGVLTWCDGYYNGGIKTRKTIQADEMEEEEEEDGGDDDEAGLRRTEQL RQLYESLSIASESHGYDPQPRRPPAALSPEDLTDAEWYFLVCMTYEFTNGQGLPGRTLAKNTVSWLSDAHLADSKVFSRS LLAKSASIQTVVCFPYLEGLVEFGVAEKVLEEQNIVKQIKDLLFDVPSQKVREIPLESCSNMLDHHDIVINNLDNMLEYD QNQEQSWRFVDDDDDDEGEISFHQNNSMGSSDCISQNLASGHGDVWSDVDDRYHCVLLRIFKNTPRLVLGPRFRNCDSKE SAFVSWKNCDGMESNGSCSQVLLKSVLYKVPKMHENRLVWSRCEDGNVDRMMKLEDDEVKDIDHRFSVLSALVPSRGKVD KVSLLDDTIDYLKTLERKVESLQSDRKSHDVRERTCDNYCNKRKASCDPTDLQEERFSDCITVSAIEKDVTIEIRCRWRD NMIVQVFDAMSSLNLESHSVHSYTVDGILTLTIESKLKSCTGSTAKMIRQALQRVIGSKFGVD* |
CDS seq | >OTG21925 ATGGCTGCAAAGGAACACTTAAGAAGAAAACTGGCTATGGCTGTCAAAAGCATTAACTGGAGCTATGCAATCTTCTGGTC CATTTCTTCAACAGAACCAGGGGTATTGACATGGTGTGATGGATACTACAATGGAGGCATCAAAACAAGGAAAACAATAC AAGCAGATGAAATGGAAGAAGAAGAAGAAGAAGATGGCGGTGATGATGATGAAGCGGGATTGCGAAGGACCGAGCAATTA AGACAACTTTATGAATCACTTTCCATAGCTTCCGAATCACACGGTTATGATCCACAACCGAGAAGGCCCCCAGCTGCATT ATCCCCTGAAGATCTCACGGACGCCGAGTGGTATTTCTTAGTTTGCATGACATATGAGTTCACTAATGGTCAAGGATTGC CAGGAAGAACATTGGCAAAGAACACAGTTAGTTGGCTGTCTGATGCTCACCTTGCCGATAGCAAAGTCTTCAGCCGCTCT CTTCTAGCAAAAAGTGCATCAATTCAGACCGTAGTATGCTTTCCATATTTAGAAGGTCTTGTTGAGTTCGGCGTAGCAGA GAAGGTTTTAGAAGAACAAAACATCGTTAAACAGATTAAAGATTTACTCTTTGATGTTCCATCGCAAAAAGTTCGTGAAA TACCCTTAGAAAGTTGTTCCAACATGCTTGATCATCATGATATAGTCATCAACAATCTCGACAACATGCTTGAATACGAT CAAAATCAAGAACAAAGTTGGCGGTTTGTGGATGATGATGATGACGACGAAGGAGAGATTAGTTTCCACCAAAATAATTC CATGGGTTCGAGTGATTGTATATCTCAAAACTTAGCAAGTGGTCATGGCGATGTTTGGAGCGACGTCGATGATCGCTATC ATTGTGTTCTTTTGAGGATATTCAAGAACACCCCGAGATTGGTTTTGGGACCTCGTTTTAGAAACTGCGATTCGAAAGAG TCTGCTTTTGTTAGCTGGAAAAATTGTGATGGAATGGAATCGAACGGAAGTTGTTCACAAGTGTTATTAAAAAGTGTGCT TTATAAAGTCCCGAAAATGCACGAAAACCGCTTAGTTTGGTCTCGATGTGAAGATGGAAATGTGGATCGAATGATGAAAC TCGAAGATGACGAAGTGAAGGATATTGATCATAGGTTTTCGGTGCTAAGCGCATTGGTCCCTTCTAGAGGAAAGGTTGAC AAAGTGTCTCTACTCGATGACACTATCGACTACTTAAAAACTCTGGAGAGAAAGGTGGAATCGTTACAATCCGACAGAAA ATCTCATGATGTGCGAGAAAGAACGTGTGATAACTATTGCAACAAACGAAAAGCATCTTGCGATCCTACAGATTTACAAG AAGAACGTTTTTCGGATTGTATCACAGTCAGCGCGATAGAAAAAGATGTGACGATTGAGATACGATGTAGGTGGCGAGAT AACATGATAGTTCAAGTGTTTGATGCAATGAGCAGCCTAAACTTGGAATCTCATTCTGTTCATTCATATACTGTTGATGG AATTCTCACATTAACCATTGAATCAAAGTTAAAGAGTTGTACAGGATCAACAGCAAAGATGATCAGGCAGGCACTTCAAA GAGTAATTGGTAGTAAATTTGGTGTAGATTAG |