
Microexon ID | At_4:6183341-6183355:+ |
Species | Arabidopsis thaliana | Coordinates | 4:6183341..6183355 |
Microexon Cluster ID | MEP42 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | bHLH-MYC_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AGTGCTAAAATTCAG |
Microexon Amino Acid seq | SAKIQ |
Microexon-tag DNA Seq | GCAAATGAAGTTGACAGTAAAACTTTTTCTAGAGCTATTCTCGCTAAGAGTGCTAAAATTCAGACAGTGGTTTGCATTCCAATGCTTGATGGTGTTGTGGAACTAGGC |
Microexon-tag Amino Acid Seq | ANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELG |
Microexon-tag spanning region | 6183105-6183482 |
Microexon-tag prediction score | 0.9292 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT4G09820.1x |
Reference Transcript ID | AT4G09820.1 |
Gene ID | AT4G09820 |
Gene Name | TT8 |
Transcript ID | AT4G09820.1 |
Protein ID | AT4G09820.1 |
Gene ID | AT4G09820 |
Gene Name | TT8 |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 5.9e-51 |
Motif start | 20 |
Motif end | 201 |
Protein seq | >AT4G09820.1 MDESSIIPAEKVAGAEKKELQGLLKTAVQSVDWTYSVFWQFCPQQRVLVWGNGYYNGAIKTRKTTQPAEVTAEEAALERS QQLRELYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSFPPPSGMPGKAYARRKHVWLSGANEVDSKTFSRAIL AKSAKIQTVVCIPMLDGVVELGTTKKVREDVEFVELTKSFFYDHCKTNPKPALSEHSTYEVHEEAEDEEEVEEEMTMSEE MRLGSPDDEDVSNQNLHSDLHIESTHTLDTHMDMMNLMEEGGNYSQTVTTLLMSHPTSLLSDSVSTSSYIQSSFATWRVE NGKEHQQVKTAPSSQWVLKQMIFRVPFLHDNTKDKRLPREDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGD TIAYVNHLRKRVHELENTHHEQQHKRTRTCKRKTSEEVEVSIIENDVLLEMRCEYRDGLLLDILQVLHELGIETTAVHTS VNDHDFEAEIRAKVRGKKASIAEVKRAIHQVIIHDTNL* |
CDS seq | >AT4G09820.1 ATGGATGAATCAAGTATTATTCCGGCAGAGAAAGTGGCCGGAGCTGAGAAAAAAGAGCTTCAAGGGCTGCTTAAGACGGC GGTTCAATCTGTGGACTGGACTTATAGTGTCTTCTGGCAATTTTGTCCTCAACAACGGGTCTTGGTGTGGGGGAATGGAT ACTACAACGGTGCAATAAAGACGAGGAAGACAACTCAACCAGCGGAGGTGACGGCAGAAGAGGCGGCGTTAGAGAGGAGC CAACAGCTCAGGGAGCTTTATGAGACACTTTTAGCCGGAGAGTCAACGTCAGAAGCAAGAGCATGCACCGCATTGTCACC GGAGGATTTGACGGAGACAGAATGGTTTTATCTAATGTGCGTCTCTTTCTCTTTTCCTCCTCCATCTGGGATGCCAGGAA AAGCGTATGCAAGGAGGAAGCACGTATGGCTAAGTGGTGCAAATGAAGTTGACAGTAAAACTTTTTCTAGAGCTATTCTC GCTAAGAGTGCTAAAATTCAGACAGTGGTTTGCATTCCAATGCTTGATGGTGTTGTGGAACTAGGCACAACGAAAAAGGT AAGAGAAGATGTAGAGTTTGTTGAGCTCACAAAGAGTTTCTTCTATGACCACTGCAAGACGAACCCAAAGCCGGCTCTTT CTGAACACTCCACCTACGAAGTGCATGAAGAAGCCGAAGACGAAGAAGAAGTAGAAGAAGAGATGACAATGTCAGAGGAA ATGAGGCTTGGCTCTCCTGATGATGAAGATGTTTCCAATCAAAATCTACACTCTGATCTTCATATTGAATCAACCCATAC GTTAGACACACATATGGACATGATGAATCTAATGGAGGAAGGTGGAAACTATTCTCAGACAGTAACAACACTTCTCATGT CACACCCCACAAGTCTTCTTTCAGATTCAGTTTCCACATCTTCTTACATCCAATCATCGTTTGCCACGTGGAGGGTTGAG AATGGCAAAGAGCATCAGCAAGTGAAAACGGCGCCGTCGTCACAATGGGTGCTCAAACAAATGATCTTCAGAGTTCCTTT CCTCCATGACAACACTAAAGATAAGAGGCTACCGCGGGAAGATCTGAGCCACGTAGTAGCAGAGCGACGCAGGAGGGAGA AGCTGAACGAGAAATTCATAACGTTGAGATCAATGGTTCCATTTGTGACCAAGATGGATAAAGTCTCAATCCTTGGAGAC ACCATTGCGTACGTAAATCATCTTCGAAAGAGGGTCCATGAGCTTGAGAATACTCATCATGAGCAACAGCATAAGCGGAC GCGTACTTGTAAGAGAAAAACATCGGAGGAGGTGGAGGTTTCCATCATAGAGAATGATGTTTTGTTAGAGATGAGATGTG AGTACCGAGATGGTTTGTTGCTTGACATTCTTCAGGTTCTTCATGAGCTTGGTATAGAGACTACGGCAGTTCATACCTCG GTGAACGACCATGATTTCGAGGCGGAGATAAGGGCGAAAGTAAGAGGGAAGAAAGCAAGCATCGCTGAGGTCAAAAGAGC CATCCACCAAGTCATAATACATGATACTAATCTATAG |
Microexon DNA seq | AGTGCTAAAATTCAG |
Microexon Amino Acid seq | SAKIQ |
Microexon-tag DNA Seq | GCAAATGAAGTTGACAGTAAAACTTTTTCTAGAGCTATTCTCGCTAAGAGTGCTAAAATTCAGACAGTGGTTTGCATTCCAATGCTTGATGGTGTTGTGGAACTAGGC |
Microexon-tag Amino Acid seq | ANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELG |
Transcript ID | AT4G09820.1 |
Gene ID | At.18240 |
Gene Name | TT8 |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 5.9e-51 |
Motif start | 20 |
Motif end | 201 |
Protein seq | >AT4G09820.1 MDESSIIPAEKVAGAEKKELQGLLKTAVQSVDWTYSVFWQFCPQQRVLVWGNGYYNGAIKTRKTTQPAEVTAEEAALERS QQLRELYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSFPPPSGMPGKAYARRKHVWLSGANEVDSKTFSRAIL AKSAKIQTVVCIPMLDGVVELGTTKKVREDVEFVELTKSFFYDHCKTNPKPALSEHSTYEVHEEAEDEEEVEEEMTMSEE MRLGSPDDEDVSNQNLHSDLHIESTHTLDTHMDMMNLMEEGGNYSQTVTTLLMSHPTSLLSDSVSTSSYIQSSFATWRVE NGKEHQQVKTAPSSQWVLKQMIFRVPFLHDNTKDKRLPREDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGD TIAYVNHLRKRVHELENTHHEQQHKRTRTCKRKTSEEVEVSIIENDVLLEMRCEYRDGLLLDILQVLHELGIETTAVHTS VNDHDFEAEIRAKVRGKKASIAEVKRAIHQVIIHDTNL* |
CDS seq | >AT4G09820.1 ATGGATGAATCAAGTATTATTCCGGCAGAGAAAGTGGCCGGAGCTGAGAAAAAAGAGCTTCAAGGGCTGCTTAAGACGGC GGTTCAATCTGTGGACTGGACTTATAGTGTCTTCTGGCAATTTTGTCCTCAACAACGGGTCTTGGTGTGGGGGAATGGAT ACTACAACGGTGCAATAAAGACGAGGAAGACAACTCAACCAGCGGAGGTGACGGCAGAAGAGGCGGCGTTAGAGAGGAGC CAACAGCTCAGGGAGCTTTATGAGACACTTTTAGCCGGAGAGTCAACGTCAGAAGCAAGAGCATGCACCGCATTGTCACC GGAGGATTTGACGGAGACAGAATGGTTTTATCTAATGTGCGTCTCTTTCTCTTTTCCTCCTCCATCTGGGATGCCAGGAA AAGCGTATGCAAGGAGGAAGCACGTATGGCTAAGTGGTGCAAATGAAGTTGACAGTAAAACTTTTTCTAGAGCTATTCTC GCTAAGAGTGCTAAAATTCAGACAGTGGTTTGCATTCCAATGCTTGATGGTGTTGTGGAACTAGGCACAACGAAAAAGGT AAGAGAAGATGTAGAGTTTGTTGAGCTCACAAAGAGTTTCTTCTATGACCACTGCAAGACGAACCCAAAGCCGGCTCTTT CTGAACACTCCACCTACGAAGTGCATGAAGAAGCCGAAGACGAAGAAGAAGTAGAAGAAGAGATGACAATGTCAGAGGAA ATGAGGCTTGGCTCTCCTGATGATGAAGATGTTTCCAATCAAAATCTACACTCTGATCTTCATATTGAATCAACCCATAC GTTAGACACACATATGGACATGATGAATCTAATGGAGGAAGGTGGAAACTATTCTCAGACAGTAACAACACTTCTCATGT CACACCCCACAAGTCTTCTTTCAGATTCAGTTTCCACATCTTCTTACATCCAATCATCGTTTGCCACGTGGAGGGTTGAG AATGGCAAAGAGCATCAGCAAGTGAAAACGGCGCCGTCGTCACAATGGGTGCTCAAACAAATGATCTTCAGAGTTCCTTT CCTCCATGACAACACTAAAGATAAGAGGCTACCGCGGGAAGATCTGAGCCACGTAGTAGCAGAGCGACGCAGGAGGGAGA AGCTGAACGAGAAATTCATAACGTTGAGATCAATGGTTCCATTTGTGACCAAGATGGATAAAGTCTCAATCCTTGGAGAC ACCATTGCGTACGTAAATCATCTTCGAAAGAGGGTCCATGAGCTTGAGAATACTCATCATGAGCAACAGCATAAGCGGAC GCGTACTTGTAAGAGAAAAACATCGGAGGAGGTGGAGGTTTCCATCATAGAGAATGATGTTTTGTTAGAGATGAGATGTG AGTACCGAGATGGTTTGTTGCTTGACATTCTTCAGGTTCTTCATGAGCTTGGTATAGAGACTACGGCAGTTCATACCTCG GTGAACGACCATGATTTCGAGGCGGAGATAAGGGCGAAAGTAAGAGGGAAGAAAGCAAGCATCGCTGAGGTCAAAAGAGC CATCCACCAAGTCATAATACATGATACTAATCTATAG |