Microexon ID Zm_1:230670666-230670680:-
Species Zea mays
Coordinates 1:230670666..230670680
Microexon Cluster ID MEP41
Size 15
Phase 0
Pfam Domain Motif DUF974
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,15,45
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq CARTTYTTCAAGTTYATTGTTKCWAAYCCACTTTCWGTTAGRACAAAGGTYCGYRYTRTCAAGGAAACTACMTWTYTRGARGCTTGYATWGARAAYCATACAAAATCA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTTCGCACCATCAAG
Microexon Amino Acid seq VRTIK
Microexon-tag DNA Seq CAGTTCTTTAAGTTCTCTGTTTCAAACCCATTATCTGTTAGGACAAAGGTTCGCACCATCAAGGACATCACATATCTGGAAGCCTGCATAGAGAACCATACAAAATCT
Microexon-tag Amino Acid Seq QFFKFSVSNPLSVRTKVRTIKDITYLEACIENHTKS
Microexon-tag spanning region230669901-230670851
Microexon-tag prediction score0.9641
Overlapped with the annotated transcript (%) 100
New Transcript ID Zm00001d032566_T001x
Reference Transcript ID Zm00001d032566_T001
Gene ID Zm00001d032566
Gene Name NA
Transcript ID Zm00001d032566_T001
Protein ID Zm00001d032566_P001
Gene ID Zm00001d032566
Gene Name NA
Pfam domain motif DUF974
Motif E-value 2e-50
Motif start 111
Motif end 272
Protein seq >Zm00001d032566_P001
MASPYAGGVQPPSPAGAVQQQQQNHSLAFRVMRLSRPSLQPDLAALLRFDPRDVFLPEDALTGSDPSAAAKFLHGLLHPA
DSATAVPGDFTFRDRFLLRDPADALALPGLLVLPQSFGAIYLGETFCSYISINNSSSFEARDVVIKAEIQTERQRILLLD
TSKSPVESIRSGGRYDFIVEHDVKELGAHTLVCTALYNDGDGERKYLPQFFKFSVSNPLSVRTKVRTIKDITYLEACIEN
HTKSNLYMDQVDFEPAQQWSATRLEADEHPSTVKSAIGYCDIEPKPTASKDVNLRAVKVPPIIYVERAFMVNLCLTNQTD
KTVGPFEVFLAPSMSGEDRAVLVNGPQKLILPLVEAFESIKFDLSMVTTQLGVQKISGITMYAVQEKKYYEPLPDIEIFV
DAE*
CDS seq >Zm00001d032566_T001
ATGGCTTCGCCTTACGCCGGCGGCGTGCAGCCTCCCTCTCCCGCTGGGGCGGTGCAGCAGCAGCAGCAGAACCACTCTCT
GGCGTTCCGCGTGATGCGGCTGTCTCGCCCCTCACTCCAGCCAGACCTGGCCGCTCTGCTCCGCTTCGACCCACGCGACG
TCTTCCTCCCTGAGGACGCGCTCACCGGCTCCGACCCGTCCGCTGCCGCCAAATTCCTCCACGGCCTCCTCCACCCTGCG
GACTCCGCCACTGCCGTCCCTGGAGACTTCACCTTCCGCGACCGCTTCCTCCTCCGCGACCCAGCCGACGCGCTCGCTCT
GCCGGGCCTCCTCGTCCTCCCCCAGTCGTTCGGTGCGATCTATCTGGGCGAGACCTTCTGCAGTTACATCAGCATCAACA
ATAGCTCCAGCTTTGAGGCCAGGGACGTCGTCATCAAGGCAGAAATACAAACAGAGAGACAGAGAATACTTCTTCTGGAT
ACATCAAAATCCCCTGTTGAGTCAATTAGATCTGGGGGTAGATATGATTTCATTGTGGAACATGATGTCAAAGAACTAGG
AGCACATACGCTTGTATGTACTGCTTTATATAATGATGGTGATGGAGAGCGTAAATATCTTCCCCAGTTCTTTAAGTTCT
CTGTTTCAAACCCATTATCTGTTAGGACAAAGGTTCGCACCATCAAGGACATCACATATCTGGAAGCCTGCATAGAGAAC
CATACAAAATCTAATCTTTACATGGATCAAGTTGATTTTGAGCCTGCCCAACAATGGAGTGCTACAAGACTGGAAGCTGA
TGAACATCCCTCAACAGTGAAGTCTGCAATAGGTTACTGTGATATTGAGCCTAAGCCGACTGCAAGCAAAGATGTTAATC
TCCGTGCTGTGAAAGTTCCACCTATTATATATGTGGAAAGAGCATTTATGGTCAATCTGTGCCTTACAAATCAAACGGAC
AAAACTGTGGGCCCTTTTGAAGTATTTCTGGCTCCAAGCATGTCGGGTGAAGACAGAGCTGTTCTAGTCAATGGGCCACA
GAAGTTGATTTTACCTTTGGTGGAGGCTTTTGAGTCTATCAAATTTGATCTGAGCATGGTGACCACCCAGCTAGGAGTGC
AAAAGATTTCCGGAATTACAATGTACGCCGTGCAGGAAAAGAAGTACTATGAACCTTTGCCCGACATAGAGATTTTTGTT
GATGCAGAATAG
Microexon DNA seq GTTCGCACCATCAAG
Microexon Amino Acid seq VRTIK
Microexon-tag DNA Seq CAGTTCTTTAAGTTCTCTGTTTCAAACCCATTATCTGTTAGGACAAAGGTTCGCACCATCAAGGACATCACATATCTGGAAGCCTGCATAGAGAACCATACAAAATCT
Microexon-tag Amino Acid seq QFFKFSVSNPLSVRTKVRTIKDITYLEACIENHTKS
Transcript ID Zm00001d032566_T002
Gene ID Zm.3986
Gene Name NA
Pfam domain motif DUF974
Motif E-value 2.2e-64
Motif start 111
Motif end 340
Protein seq >Zm00001d032566_T002
MASPYAGGVQPPSPAGAVQQQQQNHSLAFRVMRLSRPSLQPDLAALLRFDPRDVFLPEDALTGSDPSAAAKFLHGLLHPA
DSATAVPGDFTFRDRFLLRDPADALALPGLLVLPQSFGAIYLGETFCSYISINNSSSFEARDVVIKAEIQTERQRILLLD
TSKSPVESIRSGGRYDFIVEHDVKELGAHTLVCTALYNDGDGERKYLPQFFKFSVSNPLSVRTKVRTIKDITYLEACIEN
HTKSNLYMDQVDFEPAQQWSATRLEADEHPSTVKSAIGDLCKQPILIRAGGGIYNYLYQLRSSSDEAGQTKSEGSSILGK
FQITWRTNLGEPGRLQTQNIHSTPTASKDVNLRAVKVPPIIYVERAFMVNLCLTNQTDKTVGPFEVFLAPSMSGEDRAVL
VNGPQKLILPLVEAFESIKFDLSMVTTQLGVQKISGITMYAVQEKKYYEPLPDIEIFVDAE*
CDS seq >Zm00001d032566_T002
ATGGCTTCGCCTTACGCCGGCGGCGTGCAGCCTCCCTCTCCCGCTGGGGCGGTGCAGCAGCAGCAGCAGAACCACTCTCT
GGCGTTCCGCGTGATGCGGCTGTCTCGCCCCTCACTCCAGCCAGACCTGGCCGCTCTGCTCCGCTTCGACCCACGCGACG
TCTTCCTCCCTGAGGACGCGCTCACCGGCTCCGACCCGTCCGCTGCCGCCAAATTCCTCCACGGCCTCCTCCACCCTGCG
GACTCCGCCACTGCCGTCCCTGGAGACTTCACCTTCCGCGACCGCTTCCTCCTCCGCGACCCAGCCGACGCGCTCGCTCT
GCCGGGCCTCCTCGTCCTCCCCCAGTCGTTCGGTGCGATCTATCTGGGCGAGACCTTCTGCAGTTACATCAGCATCAACA
ATAGCTCCAGCTTTGAGGCCAGGGACGTCGTCATCAAGGCAGAAATACAAACAGAGAGACAGAGAATACTTCTTCTGGAT
ACATCAAAATCCCCTGTTGAGTCAATTAGATCTGGGGGTAGATATGATTTCATTGTGGAACATGATGTCAAAGAACTAGG
AGCACATACGCTTGTATGTACTGCTTTATATAATGATGGTGATGGAGAGCGTAAATATCTTCCCCAGTTCTTTAAGTTCT
CTGTTTCAAACCCATTATCTGTTAGGACAAAGGTTCGCACCATCAAGGACATCACATATCTGGAAGCCTGCATAGAGAAC
CATACAAAATCTAATCTTTACATGGATCAAGTTGATTTTGAGCCTGCCCAACAATGGAGTGCTACAAGACTGGAAGCTGA
TGAACATCCCTCAACAGTGAAGTCTGCAATAGGGGATCTCTGTAAACAACCGATCCTCATCAGAGCTGGGGGAGGAATAT
ACAATTACCTTTATCAGCTAAGATCATCATCTGATGAAGCTGGTCAAACAAAGTCTGAGGGAAGCAGTATACTTGGTAAA
TTTCAGATAACATGGCGTACGAACCTGGGTGAACCAGGCCGTTTGCAGACTCAGAACATTCATAGCACTCCGACTGCAAG
CAAAGATGTTAATCTCCGTGCTGTGAAAGTTCCACCTATTATATATGTGGAAAGAGCATTTATGGTCAATCTGTGCCTTA
CAAATCAAACGGACAAAACTGTGGGCCCTTTTGAAGTATTTCTGGCTCCAAGCATGTCGGGTGAAGACAGAGCTGTTCTA
GTCAATGGGCCACAGAAGTTGATTTTACCTTTGGTGGAGGCTTTTGAGTCTATCAAATTTGATCTGAGCATGGTGACCAC
CCAGCTAGGAGTGCAAAAGATTTCCGGAATTACAATGTACGCCGTGCAGGAAAAGAAGTACTATGAACCTTTGCCCGACA
TAGAGATTTTTGTTGATGCAGAATAG