Microexon ID Ta_1D:240122864-240122878:-
Species Triticum   Aestivum
Coordinates 1D:240122864..240122878
Microexon Cluster ID MEP41
Size 15
Phase 0
Pfam Domain Motif DUF974
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,15,45
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq CARTTYTTCAAGTTYATTGTTKCWAAYCCACTTTCWGTTAGRACAAAGGTYCGYRYTRTCAAGGAAACTACMTWTYTRGARGCTTGYATWGARAAYCATACAAAATCA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTTCGCACCATCAAG
Microexon Amino Acid seq VRTIK
Microexon-tag DNA Seq CAGTTCTTCAAGTTCACTGTTTCAAACCCATTGTCTGTTCGAACAAAGGTTCGCACCATCAAGGATACTACATATCTGGAAGCCTGCATAGAGAATCATACAAAATCT
Microexon-tag Amino Acid Seq QFFKFTVSNPLSVRTKVRTIKDTTYLEACIENHTKS
Microexon-tag spanning region240122208-240123011
Microexon-tag prediction score0.9702
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS1D02G168000.1x
Reference Transcript ID TraesCS1D02G168000.1
Gene ID TraesCS1D02G168000
Gene Name NA
Transcript ID TraesCS1D02G168000.1
Protein ID
Gene ID TraesCS1D02G168000
Gene Name
Pfam domain motif TRAPPC13_M
Motif E-value 3.70E-21
Motif start 221
Motif end 342
Protein seq >TraesCS1D02G168000.1
MSSPYTGAQQPSPATHQLPAAQQNHSLAFRVMRLSRPSLRPDPAALLRFDPRDVFLPEDALTSPDPSAAVDFLQGLLHPP
DSGAATTVPGDFTFRDRFLLHDTADALAPPGLLVLPQAFGAIYLGETFCSYISINNSSGLEAREVIIKAEIQTERQRILL
LDTSKSPVESIRSGGRYDFIVEHDVKELGAHTLVCTALYNDGDAERKYLPQFFKFTVSNPLSVRTKVRTIKDTTYLEACI
ENHTKSNLYMDQVDFEPAQQWSATILEADEHPSVVKSTIRDLCKQPVLIRAAGGIYNYLYQLRPSSDEPGQMKTEGSSIL
GKFQITWRTNLGEPGRLQTQNIHSTPTPSKDVDLRAVKIPPVIFLERPFMVNLCLTNQTEKTVGPFEVFLAPSVSGEQKT
VLVNGLQKLVLPLVEAFESINFDLSMVATQLGVQKISGITLYAVQERKHYEPLPDIEIFVDAE*
CDS seq >TraesCS1D02G168000.1
ATGTCGTCGCCCTACACCGGCGCGCAGCAGCCGTCCCCGGCGACGCACCAGCTGCCGGCGGCGCAGCAGAACCATTCGCT
GGCGTTCCGCGTGATGCGGCTGTCCCGCCCTTCGCTGCGGCCCGACCCGGCGGCGCTCCTCCGCTTCGACCCCCGGGACG
TCTTCCTCCCCGAGGACGCGCTCACCTCCCCCGACCCCTCCGCCGCCGTCGACTTTCTTCAAGGCCTGCTCCACCCGCCC
GACTCCGGCGCAGCCACCACCGTCCCCGGGGACTTCACCTTCCGCGATCGCTTCCTCCTCCACGACACCGCCGACGCCCT
CGCGCCCCCGGGCCTGCTCGTCCTCCCACAGGCCTTCGGGGCGATCTATTTGGGGGAGACATTCTGCAGCTACATCAGCA
TCAACAACAGCTCCGGCTTGGAAGCCAGGGAAGTCATAATCAAGGCAGAAATACAAACCGAGAGACAGAGGATACTTCTC
CTGGATACATCGAAATCGCCTGTTGAATCGATTCGATCAGGGGGTAGATATGATTTTATCGTGGAGCATGATGTCAAAGA
ACTTGGCGCACATACGCTTGTCTGTACTGCTTTATATAATGATGGTGATGCGGAGCGTAAATATCTCCCTCAGTTCTTCA
AGTTCACTGTTTCAAACCCATTGTCTGTTCGAACAAAGGTTCGCACCATCAAGGATACTACATATCTGGAAGCCTGCATA
GAGAATCATACAAAATCTAACCTTTACATGGATCAAGTAGATTTTGAACCTGCCCAACAGTGGAGCGCTACAATACTGGA
AGCTGATGAGCACCCCTCAGTGGTGAAGTCTACAATACGGGACCTCTGCAAACAACCTGTTCTGATTAGAGCGGCAGGAG
GAATATATAATTACCTATATCAGCTCAGACCATCGTCCGATGAGCCTGGTCAAATGAAGACAGAGGGTAGCAGCATACTT
GGTAAATTTCAGATTACATGGCGGACAAATCTTGGTGAACCAGGCCGCCTGCAAACTCAGAACATTCATAGCACTCCTAC
TCCAAGCAAAGATGTTGACCTTCGTGCCGTGAAAATTCCACCTGTTATATTTCTAGAAAGACCATTTATGGTCAATCTAT
GCCTTACAAATCAAACAGAGAAAACAGTTGGCCCTTTTGAAGTATTTCTAGCTCCAAGCGTATCTGGTGAACAAAAAACT
GTTCTGGTCAATGGATTACAGAAGTTGGTTTTGCCATTAGTGGAGGCTTTTGAGTCCATCAACTTTGACCTGAGCATGGT
AGCTACCCAACTTGGCGTGCAAAAGATCTCTGGAATTACATTGTATGCCGTGCAGGAAAGGAAGCACTACGAACCTTTGC
CAGACATAGAGATTTTCGTCGACGCGGAATAG
Ta_1D:240122864-240122878:- does not have available information here.