
Microexon ID | Ta_1D:240122864-240122878:- |
Species | Triticum Aestivum | Coordinates | 1D:240122864..240122878 |
Microexon Cluster ID | MEP41 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | DUF974 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CARTTYTTCAAGTTYATTGTTKCWAAYCCACTTTCWGTTAGRACAAAGGTYCGYRYTRTCAAGGAAACTACMTWTYTRGARGCTTGYATWGARAAYCATACAAAATCA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTTCGCACCATCAAG |
Microexon Amino Acid seq | VRTIK |
Microexon-tag DNA Seq | CAGTTCTTCAAGTTCACTGTTTCAAACCCATTGTCTGTTCGAACAAAGGTTCGCACCATCAAGGATACTACATATCTGGAAGCCTGCATAGAGAATCATACAAAATCT |
Microexon-tag Amino Acid Seq | QFFKFTVSNPLSVRTKVRTIKDTTYLEACIENHTKS |
Microexon-tag spanning region | 240122208-240123011 |
Microexon-tag prediction score | 0.9702 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS1D02G168000.1x |
Reference Transcript ID | TraesCS1D02G168000.1 |
Gene ID | TraesCS1D02G168000 |
Gene Name | NA |
Transcript ID | TraesCS1D02G168000.1 |
Protein ID | |
Gene ID | TraesCS1D02G168000 |
Gene Name | |
Pfam domain motif | TRAPPC13_M |
Motif E-value | 3.70E-21 |
Motif start | 221 |
Motif end | 342 |
Protein seq | >TraesCS1D02G168000.1 MSSPYTGAQQPSPATHQLPAAQQNHSLAFRVMRLSRPSLRPDPAALLRFDPRDVFLPEDALTSPDPSAAVDFLQGLLHPP DSGAATTVPGDFTFRDRFLLHDTADALAPPGLLVLPQAFGAIYLGETFCSYISINNSSGLEAREVIIKAEIQTERQRILL LDTSKSPVESIRSGGRYDFIVEHDVKELGAHTLVCTALYNDGDAERKYLPQFFKFTVSNPLSVRTKVRTIKDTTYLEACI ENHTKSNLYMDQVDFEPAQQWSATILEADEHPSVVKSTIRDLCKQPVLIRAAGGIYNYLYQLRPSSDEPGQMKTEGSSIL GKFQITWRTNLGEPGRLQTQNIHSTPTPSKDVDLRAVKIPPVIFLERPFMVNLCLTNQTEKTVGPFEVFLAPSVSGEQKT VLVNGLQKLVLPLVEAFESINFDLSMVATQLGVQKISGITLYAVQERKHYEPLPDIEIFVDAE* |
CDS seq | >TraesCS1D02G168000.1 ATGTCGTCGCCCTACACCGGCGCGCAGCAGCCGTCCCCGGCGACGCACCAGCTGCCGGCGGCGCAGCAGAACCATTCGCT GGCGTTCCGCGTGATGCGGCTGTCCCGCCCTTCGCTGCGGCCCGACCCGGCGGCGCTCCTCCGCTTCGACCCCCGGGACG TCTTCCTCCCCGAGGACGCGCTCACCTCCCCCGACCCCTCCGCCGCCGTCGACTTTCTTCAAGGCCTGCTCCACCCGCCC GACTCCGGCGCAGCCACCACCGTCCCCGGGGACTTCACCTTCCGCGATCGCTTCCTCCTCCACGACACCGCCGACGCCCT CGCGCCCCCGGGCCTGCTCGTCCTCCCACAGGCCTTCGGGGCGATCTATTTGGGGGAGACATTCTGCAGCTACATCAGCA TCAACAACAGCTCCGGCTTGGAAGCCAGGGAAGTCATAATCAAGGCAGAAATACAAACCGAGAGACAGAGGATACTTCTC CTGGATACATCGAAATCGCCTGTTGAATCGATTCGATCAGGGGGTAGATATGATTTTATCGTGGAGCATGATGTCAAAGA ACTTGGCGCACATACGCTTGTCTGTACTGCTTTATATAATGATGGTGATGCGGAGCGTAAATATCTCCCTCAGTTCTTCA AGTTCACTGTTTCAAACCCATTGTCTGTTCGAACAAAGGTTCGCACCATCAAGGATACTACATATCTGGAAGCCTGCATA GAGAATCATACAAAATCTAACCTTTACATGGATCAAGTAGATTTTGAACCTGCCCAACAGTGGAGCGCTACAATACTGGA AGCTGATGAGCACCCCTCAGTGGTGAAGTCTACAATACGGGACCTCTGCAAACAACCTGTTCTGATTAGAGCGGCAGGAG GAATATATAATTACCTATATCAGCTCAGACCATCGTCCGATGAGCCTGGTCAAATGAAGACAGAGGGTAGCAGCATACTT GGTAAATTTCAGATTACATGGCGGACAAATCTTGGTGAACCAGGCCGCCTGCAAACTCAGAACATTCATAGCACTCCTAC TCCAAGCAAAGATGTTGACCTTCGTGCCGTGAAAATTCCACCTGTTATATTTCTAGAAAGACCATTTATGGTCAATCTAT GCCTTACAAATCAAACAGAGAAAACAGTTGGCCCTTTTGAAGTATTTCTAGCTCCAAGCGTATCTGGTGAACAAAAAACT GTTCTGGTCAATGGATTACAGAAGTTGGTTTTGCCATTAGTGGAGGCTTTTGAGTCCATCAACTTTGACCTGAGCATGGT AGCTACCCAACTTGGCGTGCAAAAGATCTCTGGAATTACATTGTATGCCGTGCAGGAAAGGAAGCACTACGAACCTTTGC CAGACATAGAGATTTTCGTCGACGCGGAATAG |
Ta_1D:240122864-240122878:- does not have available information here.