Microexon ID Ta_1B:334309939-334309953:-
Species Triticum   Aestivum
Coordinates 1B:334309939..334309953
Microexon Cluster ID MEP41
Size 15
Phase 0
Pfam Domain Motif DUF974
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,15,45
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq CARTTYTTCAAGTTYATTGTTKCWAAYCCACTTTCWGTTAGRACAAAGGTYCGYRYTRTCAAGGAAACTACMTWTYTRGARGCTTGYATWGARAAYCATACAAAATCA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTTCGCACCATCAAG
Microexon Amino Acid seq VRTIK
Microexon-tag DNA Seq CAGTTCTTCAAATTCACTGTTTCAAACCCATTATCTGTTCGAACAAAGGTTCGCACCATCAAGGATACTACATATCTGGAAGCCTGCATAGAGAATCATACAAAATCT
Microexon-tag Amino Acid Seq QFFKFTVSNPLSVRTKVRTIKDTTYLEACIENHTKS
Microexon-tag spanning region334309323-334310099
Microexon-tag prediction score0.9681
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS1B02G187000.1x
Reference Transcript ID TraesCS1B02G187000.1
Gene ID TraesCS1B02G187000
Gene Name NA
Transcript ID TraesCS1B02G187000.1
Protein ID
Gene ID TraesCS1B02G187000
Gene Name
Pfam domain motif TRAPPC13_M
Motif E-value 1.20E-20
Motif start 221
Motif end 342
Protein seq >TraesCS1B02G187000.1
MSSPYTGTQQPSPAPHQLPAAQQNHSLAFRVMRLSRPSLRPDPAALLRFDPRDVFLPEDALTSPDPSAAADFLQGLLHPP
DSGAATTVPGDFTFRDRFLLHDTADALAPPGLLVLPQAFGAIYLGETFCSYISINNSSGLEAREVIIKAEIQTERQRILL
LDTSKSPVESIRSGGRYDFIVEHDVKELGAHTLVCTALYNDGDAERKYLPQFFKFTVSNPLSVRTKVRTIKDTTYLEACI
ENHTKSNLYMDQVDFEPAQQWSATILEADEYPSVVKSTIRDLCKQPILIRAAGGIYNYLYQLRPSSDEPGQIKTEGSSIL
GKFQITWRTNLGEPGRLQTQNIHSTPTPSKDVDLRAVKIPPVIFLERPFMVNLCLTNQTEKTVGPFEVFLAPSVSGEQKT
VLVNGLQKLVLPLVEAFESINFDLSMVATQLGVQKISGITLYAVQERKYYEPLTDIEIFIDAE*
CDS seq >TraesCS1B02G187000.1
ATGTCGTCCCCCTATACCGGCACGCAGCAGCCGTCCCCGGCGCCGCACCAGCTGCCGGCGGCGCAGCAGAACCATTCGCT
GGCGTTCCGGGTGATGCGGCTGTCCCGCCCTTCGCTGCGGCCCGACCCGGCGGCGCTCCTCCGCTTCGACCCCCGCGACG
TCTTCCTCCCCGAGGACGCGCTCACCTCCCCCGACCCCTCCGCCGCCGCCGACTTTCTTCAAGGCCTGCTCCACCCGCCC
GACTCCGGCGCAGCCACCACCGTCCCCGGGGACTTCACCTTCCGCGATCGCTTCCTCCTCCACGACACTGCCGACGCCCT
CGCGCCCCCCGGCCTCCTCGTCCTCCCACAGGCCTTCGGGGCGATCTATTTGGGGGAGACATTCTGCAGCTACATCAGCA
TCAACAACAGCTCTGGCTTGGAAGCCAGGGAAGTCATAATCAAGGCAGAAATACAAACTGAGAGACAGAGGATACTTCTC
CTGGATACATCAAAATCGCCTGTTGAATCGATTCGATCAGGGGGTAGATATGATTTTATCGTGGAGCATGATGTCAAAGA
ACTTGGCGCACATACGCTTGTCTGTACTGCTTTATATAATGATGGTGATGCGGAGCGTAAATATCTTCCTCAGTTCTTCA
AATTCACTGTTTCAAACCCATTATCTGTTCGAACAAAGGTTCGCACCATCAAGGATACTACATATCTGGAAGCCTGCATA
GAGAATCATACAAAATCTAACCTTTACATGGATCAAGTAGATTTTGAACCTGCCCAACAGTGGAGCGCTACAATACTGGA
AGCTGATGAATACCCCTCAGTTGTGAAGTCTACAATACGGGACCTCTGCAAACAACCAATTCTGATTAGAGCTGCAGGAG
GAATATACAATTACTTATATCAGCTCAGACCATCGTCCGATGAGCCTGGTCAAATCAAGACAGAGGGTAGCAGCATACTT
GGTAAATTTCAGATTACATGGCGGACAAATCTTGGTGAACCAGGCCGCCTGCAAACTCAGAACATTCATAGCACTCCTAC
TCCAAGCAAAGATGTTGACCTTCGTGCTGTGAAAATTCCACCTGTTATATTTCTAGAAAGACCATTTATGGTCAATCTAT
GCCTTACAAATCAAACAGAGAAAACTGTTGGCCCTTTTGAAGTATTTCTAGCTCCAAGTGTATCTGGTGAACAAAAAACT
GTTCTGGTCAATGGATTACAGAAGCTGGTTTTGCCATTAGTGGAGGCTTTTGAGTCCATCAACTTTGACCTGAGCATGGT
AGCTACTCAACTTGGCGTGCAAAAGATCTCTGGAATTACATTGTATGCCGTGCAGGAAAGGAAGTACTACGAACCTTTGA
CAGATATAGAGATTTTCATCGACGCAGAATAG
Ta_1B:334309939-334309953:- does not have available information here.