Microexon ID Ta_1A:304034700-304034714:-
Species Triticum   Aestivum
Coordinates 1A:304034700..304034714
Microexon Cluster ID MEP41
Size 15
Phase 0
Pfam Domain Motif DUF974
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,15,45
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq CARTTYTTCAAGTTYATTGTTKCWAAYCCACTTTCWGTTAGRACAAAGGTYCGYRYTRTCAAGGAAACTACMTWTYTRGARGCTTGYATWGARAAYCATACAAAATCA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTTCGCACCATCAAG
Microexon Amino Acid seq VRTIK
Microexon-tag DNA Seq CAGTTCTTCAAGTTCACTGTTTCAAACCCATTGTCTGTTCGAACAAAGGTTCGCACCATCAAGGATACTACATATCTGGAAGCCTGCATAGAGAATCATACAAAATCT
Microexon-tag Amino Acid Seq QFFKFTVSNPLSVRTKVRTIKDTTYLEACIENHTKS
Microexon-tag spanning region304034036-304034853
Microexon-tag prediction score0.9702
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS1A02G170300.1x
Reference Transcript ID TraesCS1A02G170300.1
Gene ID TraesCS1A02G170300
Gene Name NA
Transcript ID TraesCS1A02G170300.1
Protein ID
Gene ID TraesCS1A02G170300
Gene Name
Pfam domain motif TRAPPC13_M
Motif E-value 6.80E-21
Motif start 221
Motif end 342
Protein seq >TraesCS1A02G170300.1
MSSPYTGAQQPSPAPHQLPAAQQNHSLAFRVMRLSRPSLRPDPAALLRFDPRDVFLPEDALTSPDPSAAADFLQGLLQPP
DSGAATTVPGDFTFRDRFLLHDTADALAPPGLLVLPQAFGAIYLGETFCSYISINNSSGLEAREVIIKAEIQTERQRILL
LDTSKSPVESIRSGGRYDFIVEHDVKELGAHTLVCTALYNDGDAERKYLPQFFKFTVSNPLSVRTKVRTIKDTTYLEACI
ENHTKSNLYMDQVDFEPAQQWSATILEADEHPSVVKSTIRDLCKQPILIRAAGGIYNYLYQLRPSSDEPGQIKTEGSSIL
GKFQITWRTNLGEPGRLQTQNIHSTPTPSKDVDLRAVKIPPVIFLERPFMVNLCLTNQTEKTVGPFEVFLAPSVSGEQKT
VLVNGLQKLVLPLVEAFESINFDLSMVATQLGVQKISGITLYAVQERKHYEPLPDIEIFVDAE*
CDS seq >TraesCS1A02G170300.1
ATGTCGTCGCCCTACACCGGCGCGCAGCAGCCGTCCCCGGCGCCGCACCAGCTGCCGGCGGCGCAGCAGAACCATTCGCT
GGCGTTCCGCGTGATGCGGCTGTCCCGCCCTTCGCTGCGGCCCGACCCGGCGGCGCTCCTCCGCTTCGACCCCCGCGACG
TCTTCCTCCCCGAGGACGCGCTCACGTCCCCCGACCCCTCCGCCGCCGCCGACTTTCTTCAAGGCCTGCTCCAACCGCCC
GACTCCGGCGCAGCAACCACCGTCCCCGGGGACTTCACCTTCCGCGATCGCTTCCTCCTCCACGACACCGCCGACGCCCT
CGCGCCCCCCGGCCTCCTCGTCCTCCCACAGGCCTTCGGGGCGATCTATTTGGGGGAGACATTCTGCAGCTACATCAGCA
TCAACAACAGCTCCGGCTTGGAAGCCAGGGAAGTCATAATCAAGGCAGAAATACAAACCGAGAGACAGAGGATACTTCTC
CTGGATACATCGAAATCGCCTGTTGAATCGATTCGATCAGGGGGTAGATATGATTTTATCGTGGAGCATGATGTCAAAGA
ACTTGGCGCACATACGCTTGTCTGTACTGCTTTATATAACGATGGTGATGCGGAGCGTAAATATCTTCCTCAGTTCTTCA
AGTTCACTGTTTCAAACCCATTGTCTGTTCGAACAAAGGTTCGCACCATCAAGGATACTACATATCTGGAAGCCTGCATA
GAGAATCATACAAAATCTAACCTTTACATGGATCAAGTAGATTTTGAACCTGCCCAACAGTGGAGCGCTACAATACTGGA
AGCTGATGAACACCCCTCAGTGGTGAAGTCTACAATACGGGACCTCTGCAAACAACCAATTCTGATTAGAGCGGCAGGAG
GAATATACAATTACCTATATCAGCTCAGACCATCGTCCGATGAGCCTGGTCAAATCAAGACAGAGGGTAGCAGCATACTT
GGTAAATTTCAGATTACATGGCGGACAAATCTTGGTGAACCAGGCCGCCTGCAAACTCAGAACATTCATAGCACTCCTAC
TCCAAGCAAAGATGTTGACCTTCGTGCCGTGAAAATTCCACCTGTTATATTTCTAGAAAGACCATTTATGGTCAATCTAT
GCCTTACAAATCAAACAGAGAAAACAGTTGGCCCTTTTGAAGTATTTCTAGCTCCAAGCGTATCTGGTGAACAAAAAACT
GTTCTGGTCAATGGATTACAGAAGTTGGTTTTGCCATTAGTGGAGGCTTTTGAGTCCATCAACTTTGACCTGAGCATGGT
AGCTACCCAACTTGGCGTGCAAAAGATCTCTGGAATTACATTGTATGCTGTGCAGGAAAGGAAGCACTACGAACCTTTGC
CAGACATAGAGATTTTTGTCGACGCGGAATAG
Ta_1A:304034700-304034714:- does not have available information here.