
Microexon ID | Sm_GL377581:430241-430255:+ |
Species | Selaginella moellendorffii | Coordinates | GL377581:430241..430255 |
Microexon Cluster ID | MEP41 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | DUF974 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CARTTYTTCAAGTTYATTGTTKCWAAYCCACTTTCWGTTAGRACAAAGGTYCGYRYTRTCAAGGAAACTACMTWTYTRGARGCTTGYATWGARAAYCATACAAAATCA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTTAGAACAGTCAAG |
Microexon Amino Acid seq | VRTVK |
Microexon-tag DNA Seq | CAATACTTCAAGTTCACGACCTCTAATCCTGTTTCCGTCAGAACAAAGGTTAGAACAGTCAAGGATACAACATTTCTCGAGGCGTGCATAGAAAACCAAACCAAGTCT |
Microexon-tag Amino Acid Seq | QYFKFTTSNPVSVRTKVRTVKDTTFLEACIENQTKS |
Microexon-tag spanning region | 430145-430350 |
Microexon-tag prediction score | 0.905 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | EFJ27594x |
Reference Transcript ID | EFJ27594 |
Gene ID | SELMODRAFT_95233 |
Gene Name | NA |
Transcript ID | EFJ27594 |
Protein ID | EFJ27594 |
Gene ID | SELMODRAFT_95233 |
Gene Name | NA |
Pfam domain motif | DUF974 |
Motif E-value | 1.4e-61 |
Motif start | 80 |
Motif end | 309 |
Protein seq | >EFJ27594 MTSGAGAAGHSLAFRVMRLCRPSCQVDHPLLVDPSDVCNGEDSVNFKELLPGLVNGNDPGFWKRFELQEPMDAMGLSGQL VLPQTFGSIYLGETFCSYISVGNHTNHDVRDVIIKAELQTERQRIILSDNSKSPIESIRATGRFDFIIEHDIKELGGHTL VCMAVYTDPDGDRKYLPQYFKFTTSNPVSVRTKVRTVKDTTFLEACIENQTKSHLFMDQVRFEPAPPWSVTTLENEEEAS ESDGPISGYIKSLKLINGNGGARHYLFQLKRPPLESSDVKLEGANALGKLEILWRTTLGETGRLQTQQINGSPTPKKPLD VKMTNLPQRILIERPFLVRMEVTNRSEQFTGPLRVVMSETDDNGTPRTVLMNGLLSLVSSRIHEDLTGTLSQNLVAVAAG VQRIAGICLVDARDGRQVEFVPPTEVNFEALLFVANRSR* |
CDS seq | >EFJ27594 ATGACGTCCGGGGCTGGAGCAGCGGGCCACTCGCTCGCATTCCGGGTGATGCGGCTGTGCCGCCCCAGCTGCCAGGTAGA TCACCCCCTCCTCGTCGATCCCAGCGACGTGTGCAATGGTGAGGACTCGGTGAATTTCAAGGAGCTGCTGCCGGGGCTTG TCAATGGCAACGATCCGGGCTTCTGGAAGCGATTTGAGCTCCAGGAGCCCATGGATGCGATGGGGCTCTCCGGGCAGCTT GTTCTTCCACAAACTTTCGGATCGATCTATCTCGGAGAGACGTTTTGTAGCTACATCAGTGTCGGGAATCACACGAATCA CGATGTGAGAGATGTGATCATCAAAGCAGAGCTCCAGACTGAGCGTCAAAGGATTATTCTAAGCGACAACTCCAAGTCCC CGATCGAGTCCATCAGAGCGACTGGCCGATTTGATTTTATCATCGAGCACGACATCAAAGAACTTGGAGGACATACGCTT GTTTGCATGGCAGTGTACACTGATCCAGACGGTGATCGTAAATATCTTCCGCAATACTTCAAGTTCACGACCTCTAATCC TGTTTCCGTCAGAACAAAGGTTAGAACAGTCAAGGATACAACATTTCTCGAGGCGTGCATAGAAAACCAAACCAAGTCTC ACCTCTTTATGGACCAAGTTAGATTTGAGCCTGCACCGCCTTGGAGTGTCACGACTTTGGAGAACGAGGAAGAAGCTAGT GAATCAGATGGTCCCATCAGCGGCTATATCAAGAGCTTGAAACTGATCAATGGTAACGGCGGTGCTCGCCACTATCTCTT TCAGCTAAAGAGGCCGCCATTGGAATCCTCAGACGTTAAGTTAGAAGGCGCAAATGCCCTTGGGAAGCTTGAAATACTGT GGAGGACAACTCTTGGCGAAACCGGTCGCCTTCAAACGCAACAAATCAATGGCAGTCCAACGCCGAAAAAGCCTTTGGAC GTCAAGATGACAAACTTGCCGCAGAGAATTCTAATAGAACGACCATTTCTCGTTCGGATGGAAGTTACAAACCGGTCAGA ACAATTCACTGGACCGCTAAGAGTTGTCATGTCTGAGACCGATGACAATGGTACACCCAGGACAGTTCTCATGAACGGAC TCTTGAGCTTGGTAAGTTCTCGTATTCATGAAGATTTAACGGGCACTCTCTCGCAGAACTTGGTGGCGGTAGCCGCAGGT GTGCAGCGAATAGCGGGGATTTGTCTAGTGGACGCACGAGACGGCAGACAAGTTGAGTTTGTGCCTCCAACCGAGGTAAA CTTCGAAGCTTTGCTGTTCGTAGCTAATCGGTCACGCTGA |
Microexon DNA seq | GTTAGAACAGTCAAG |
Microexon Amino Acid seq | VRTVK |
Microexon-tag DNA Seq | CAATACTTCAAGTTCACGACCTCTAATCCTGTTTCCGTCAGAACAAAGGTTAGAACAGTCAAGGATACAACATTTCTCGAGGCGTGCATAGAAAACCAAACCAAGTCT |
Microexon-tag Amino Acid seq | QYFKFTTSNPVSVRTKVRTVKDTTFLEACIENQTKS |
Transcript ID | Sm.10203.1 |
Gene ID | Sm.10203 |
Gene Name | NA |
Pfam domain motif | DUF974 |
Motif E-value | 1.4e-61 |
Motif start | 80 |
Motif end | 309 |
Protein seq | >Sm.10203.1 MTSGAGAAGHSLAFRVMRLCRPSCQVDHPLLVDPSDVCNGEDSVNFKELLPGLVNGNDPGFWKRFELQEPMDAMGLSGQL VLPQTFGSIYLGETFCSYISVGNHTNHDVRDVIIKAELQTERQRIILSDNSKSPIESIRATGRFDFIIEHDIKELGGHTL VCMAVYTDPDGDRKYLPQYFKFTTSNPVSVRTKVRTVKDTTFLEACIENQTKSHLFMDQVRFEPAPPWSVTTLENEEEAS ESDGPISGYIKSLKLINGNGGARHYLFQLKRPPLESSDVKLEGANALGKLEILWRTTLGETGRLQTQQINGSPTPKKPLD VKMTNLPQRILIERPFLVRMEVTNRSEQFTGPLRVVMSETDDNGTPRTVLMNGLLSLMVPPLAPLASTELEVNLVAVAAG VQRIAGICLVDARDGRQVEFVPPTEVNFEALLFVANRSR* |
CDS seq | >Sm.10203.1 ATGACGTCCGGGGCTGGAGCAGCGGGCCACTCGCTCGCATTCCGGGTGATGCGGCTGTGCCGCCCCAGCTGCCAGGTAGA TCACCCCCTCCTCGTCGATCCCAGCGACGTGTGCAATGGTGAGGACTCGGTGAATTTCAAGGAGCTGCTGCCGGGGCTTG TCAATGGCAACGATCCGGGCTTCTGGAAGCGATTTGAGCTCCAGGAGCCCATGGATGCGATGGGGCTCTCCGGGCAGCTT GTTCTTCCACAAACTTTCGGATCGATCTATCTCGGAGAGACGTTTTGTAGCTACATCAGTGTCGGGAATCACACGAATCA CGATGTGAGAGATGTGATCATCAAAGCAGAGCTCCAGACTGAGCGTCAAAGGATTATTCTAAGCGACAACTCCAAGTCCC CGATCGAGTCCATCAGAGCGACTGGCCGATTTGATTTTATCATCGAGCACGACATCAAAGAACTTGGAGGACATACGCTT GTTTGCATGGCAGTGTACACTGATCCAGACGGTGATCGTAAATATCTTCCGCAATACTTCAAGTTCACGACCTCTAATCC TGTTTCCGTCAGAACAAAGGTTAGAACAGTCAAGGATACAACATTTCTCGAGGCGTGCATAGAAAACCAAACCAAGTCTC ACCTCTTTATGGACCAAGTTAGATTTGAGCCTGCACCGCCTTGGAGTGTCACGACTTTGGAGAACGAGGAAGAAGCTAGT GAATCAGATGGTCCCATCAGCGGCTATATCAAGAGCTTGAAACTGATCAATGGTAACGGCGGTGCTCGCCACTATCTCTT TCAGCTAAAGAGGCCGCCATTGGAATCCTCAGACGTTAAGTTAGAAGGCGCAAATGCCCTTGGGAAGCTTGAAATACTGT GGAGGACAACTCTTGGCGAAACCGGTCGCCTTCAAACGCAACAAATCAATGGCAGTCCAACGCCGAAAAAGCCTTTGGAC GTCAAGATGACAAACTTGCCGCAGAGAATTCTAATAGAACGACCATTTCTCGTTCGGATGGAAGTTACAAACCGGTCAGA ACAATTCACTGGACCGCTAAGAGTTGTCATGTCTGAGACCGATGACAATGGTACACCCAGGACAGTTCTCATGAACGGAC TCTTGAGCTTGATGGTTCCTCCACTGGCCCCTCTCGCATCGACCGAGCTGGAAGTTAACTTGGTGGCGGTAGCCGCAGGT GTGCAGCGAATAGCGGGGATTTGTCTAGTGGACGCACGAGACGGCAGACAAGTTGAGTTTGTGCCTCCAACCGAGGTAAA CTTCGAAGCTTTGCTGTTCGTAGCTAATCGGTCACGCTGA |