
Microexon ID | Ps_NC_039365.1:62843300-62843314:+ |
Species | Papaver somniferum | Coordinates | NC_039365.1:62843300..62843314 |
Microexon Cluster ID | MEP41 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | DUF974 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CARTTYTTCAAGTTYATTGTTKCWAAYCCACTTTCWGTTAGRACAAAGGTYCGYRYTRTCAAGGAAACTACMTWTYTRGARGCTTGYATWGARAAYCATACAAAATCA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTTCGCATTGTCAAG |
Microexon Amino Acid seq | VRIVK |
Microexon-tag DNA Seq | CAGTTTTTTAAGTTTATTGTTGCTAACCCACTTTCAGTACGAACAAAGGTTCGCATTGTCAAGGAAAACACGTATTTGGAAGCTTGCATTGAAAACCATACAAAGTCA |
Microexon-tag Amino Acid Seq | QFFKFIVANPLSVRTKVRIVKENTYLEACIENHTKS |
Microexon-tag spanning region | 62843122-62844314 |
Microexon-tag prediction score | 0.9724 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026550119.1x |
Reference Transcript ID | XM_026550119.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026550119.1 |
Protein ID | XP_026405904.1 |
Gene ID | LOC113301355 |
Gene Name | NA |
Pfam domain motif | DUF974 |
Motif E-value | 7.8e-65 |
Motif start | 92 |
Motif end | 321 |
Protein seq | >XP_026405904.1 MSSTQGGSHSLAFRVMRLCRPSFQIESPLLVDPIDLLTGEDLFDDPIASSSLSRLFPSSNLTNNKSNESDLSYRHRFQLQ NPSDSMGLSGLLVLPQAFGAIYLGETFYSYISINNSSEYEVRDVVIKAEIQTEKQRILLLDTSKSPVETIRAGGRYDFIV EHDVKELGAHTLVCTALYNDGEGERKYLPQFFKFIVANPLSVRTKVRIVKENTYLEACIENHTKSSLYMDQVDFEPTQNW SATILKADEHHSEVDCSTRDIFKQPVLIKAGGGIHNFLYQLKQSSDGPAQIKVEGSNTLGKLQITWRTNLGEPGRLQTQH ILGSPFARKEIELQIVEVPSVTLLEKPFVVRLTLTNHLDRKMGPFEIFLSRRDLQEEKAVMVNGARTLAIQQVEALSSVE FNLNLIAARVGVQKIRGITLVDHGDNRTYDPVPDYEIFVDLD* |
CDS seq | >XM_026550119.1 ATGAGTTCAACACAGGGGGGATCCCATTCATTAGCATTTAGGGTAATGAGATTATGTAGACCATCATTTCAAATCGAAAG TCCTCTTCTTGTTGACCCAATTGATTTACTTACTGGTGAAGATCTATTTGATGATCCAATTGCTTCTTCTAGTCTATCTC GACTATTCCCTTCATCTAATCTTACCAATAACAAATCAAATGAATCAGATCTCTCTTATCGTCATCGGTTTCAGCTTCAA AATCCTTCCGATTCCATGGGTCTTTCTGGTCTTCTTGTTCTTCCTCAAGCTTTTGGGGCAATTTATCTAGGAGAGACGTT TTATAGTTATATCAGTATCAATAACAGTTCTGAATATGAAGTCCGAGATGTTGTTATTAAGGCTGAAATACAAACAGAAA AGCAGCGAATACTGCTTTTAGATACTTCAAAATCACCTGTAGAGACAATACGAGCAGGGGGTCGATATGATTTCATTGTG GAACATGATGTCAAGGAACTTGGTGCACACACGCTGGTATGCACTGCTCTGTATAATGATGGTGAAGGCGAGCGCAAGTA TCTACCTCAGTTTTTTAAGTTTATTGTTGCTAACCCACTTTCAGTACGAACAAAGGTTCGCATTGTCAAGGAAAACACGT ATTTGGAAGCTTGCATTGAAAACCATACAAAGTCAAGCCTTTACATGGACCAAGTCGATTTTGAGCCTACTCAGAATTGG AGTGCAACAATACTGAAAGCTGATGAGCATCATTCAGAAGTGGATTGTAGCACAAGAGATATTTTTAAGCAACCTGTTCT CATCAAAGCTGGGGGAGGAATTCACAATTTTCTCTATCAGCTTAAGCAGTCCTCAGATGGGCCTGCACAAATTAAAGTTG AAGGTAGCAATACTCTTGGTAAGCTTCAGATAACATGGCGTACGAATTTGGGTGAACCTGGCCGTCTGCAAACACAACAT ATTCTTGGAAGTCCCTTCGCACGTAAAGAGATTGAATTGCAGATTGTGGAGGTTCCTTCTGTCACCCTCTTGGAAAAACC GTTTGTGGTAAGGTTAACCCTCACAAATCATTTGGATAGGAAAATGGGCCCCTTCGAAATTTTCTTATCGCGACGGGATC TTCAAGAGGAGAAAGCTGTTATGGTTAATGGTGCGCGGACTCTGGCAATACAGCAGGTGGAAGCATTGAGCTCCGTGGAA TTCAACCTGAATCTAATTGCTGCTAGAGTTGGGGTTCAAAAAATCAGAGGAATTACATTAGTAGACCATGGTGATAACAG AACGTATGATCCTGTTCCAGACTATGAGATATTTGTGGATTTAGATTGA |
Microexon DNA seq | GTTCGCATTGTCAAG |
Microexon Amino Acid seq | VRIVK |
Microexon-tag DNA Seq | CAGTTTTTTAAGTTTATTGTTGCTAACCCACTTTCAGTACGAACAAAGGTTCGCATTGTCAAGGAAAACACGTATTTGGAAGCTTGCATTGAAAACCATACAAAGTCA |
Microexon-tag Amino Acid seq | QFFKFIVANPLSVRTKVRIVKENTYLEACIENHTKS |
Transcript ID | XM_026550119.1 |
Gene ID | Ps.49602 |
Gene Name | NA |
Pfam domain motif | DUF974 |
Motif E-value | 7.8e-65 |
Motif start | 92 |
Motif end | 321 |
Protein seq | >XM_026550119.1 MSSTQGGSHSLAFRVMRLCRPSFQIESPLLVDPIDLLTGEDLFDDPIASSSLSRLFPSSNLTNNKSNESDLSYRHRFQLQ NPSDSMGLSGLLVLPQAFGAIYLGETFYSYISINNSSEYEVRDVVIKAEIQTEKQRILLLDTSKSPVETIRAGGRYDFIV EHDVKELGAHTLVCTALYNDGEGERKYLPQFFKFIVANPLSVRTKVRIVKENTYLEACIENHTKSSLYMDQVDFEPTQNW SATILKADEHHSEVDCSTRDIFKQPVLIKAGGGIHNFLYQLKQSSDGPAQIKVEGSNTLGKLQITWRTNLGEPGRLQTQH ILGSPFARKEIELQIVEVPSVTLLEKPFVVRLTLTNHLDRKMGPFEIFLSRRDLQEEKAVMVNGARTLAIQQVEALSSVE FNLNLIAARVGVQKIRGITLVDHGDNRTYDPVPDYEIFVDLD* |
CDS seq | >XM_026550119.1 ATGAGTTCAACACAGGGGGGATCCCATTCATTAGCATTTAGGGTAATGAGATTATGTAGACCATCATTTCAAATCGAAAG TCCTCTTCTTGTTGACCCAATTGATTTACTTACTGGTGAAGATCTATTTGATGATCCAATTGCTTCTTCTAGTCTATCTC GACTATTCCCTTCATCTAATCTTACCAATAACAAATCAAATGAATCAGATCTCTCTTATCGTCATCGGTTTCAGCTTCAA AATCCTTCCGATTCCATGGGTCTTTCTGGTCTTCTTGTTCTTCCTCAAGCTTTTGGGGCAATTTATCTAGGAGAGACGTT TTATAGTTATATCAGTATCAATAACAGTTCTGAATATGAAGTCCGAGATGTTGTTATTAAGGCTGAAATACAAACAGAAA AGCAGCGAATACTGCTTTTAGATACTTCAAAATCACCTGTAGAGACAATACGAGCAGGGGGTCGATATGATTTCATTGTG GAACATGATGTCAAGGAACTTGGTGCACACACGCTGGTATGCACTGCTCTGTATAATGATGGTGAAGGCGAGCGCAAGTA TCTACCTCAGTTTTTTAAGTTTATTGTTGCTAACCCACTTTCAGTACGAACAAAGGTTCGCATTGTCAAGGAAAACACGT ATTTGGAAGCTTGCATTGAAAACCATACAAAGTCAAGCCTTTACATGGACCAAGTCGATTTTGAGCCTACTCAGAATTGG AGTGCAACAATACTGAAAGCTGATGAGCATCATTCAGAAGTGGATTGTAGCACAAGAGATATTTTTAAGCAACCTGTTCT CATCAAAGCTGGGGGAGGAATTCACAATTTTCTCTATCAGCTTAAGCAGTCCTCAGATGGGCCTGCACAAATTAAAGTTG AAGGTAGCAATACTCTTGGTAAGCTTCAGATAACATGGCGTACGAATTTGGGTGAACCTGGCCGTCTGCAAACACAACAT ATTCTTGGAAGTCCCTTCGCACGTAAAGAGATTGAATTGCAGATTGTGGAGGTTCCTTCTGTCACCCTCTTGGAAAAACC GTTTGTGGTAAGGTTAACCCTCACAAATCATTTGGATAGGAAAATGGGCCCCTTCGAAATTTTCTTATCGCGACGGGATC TTCAAGAGGAGAAAGCTGTTATGGTTAATGGTGCGCGGACTCTGGCAATACAGCAGGTGGAAGCATTGAGCTCCGTGGAA TTCAACCTGAATCTAATTGCTGCTAGAGTTGGGGTTCAAAAAATCAGAGGAATTACATTAGTAGACCATGGTGATAACAG AACGTATGATCCTGTTCCAGACTATGAGATATTTGTGGATTTAGATTGA |