
Microexon ID | Ps_NC_039364.1:82881241-82881255:+ |
Species | Papaver somniferum | Coordinates | NC_039364.1:82881241..82881255 |
Microexon Cluster ID | MEP41 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | DUF974 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CARTTYTTCAAGTTYATTGTTKCWAAYCCACTTTCWGTTAGRACAAAGGTYCGYRYTRTCAAGGAAACTACMTWTYTRGARGCTTGYATWGARAAYCATACAAAATCA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTTCGCATTGTCAAG |
Microexon Amino Acid seq | VRIVK |
Microexon-tag DNA Seq | CAGTTTTTTAAGTTTATTGTTGCTAACCCACTTTCAGTACGAACAAAGGTTCGCATTGTCAAGGAAAACACGTATTTGGAAGCTTGCATTGAAAACCATACGAAGTCA |
Microexon-tag Amino Acid Seq | QFFKFIVANPLSVRTKVRIVKENTYLEACIENHTKS |
Microexon-tag spanning region | 82881063-82882245 |
Microexon-tag prediction score | 0.9694 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026546344.1x |
Reference Transcript ID | XM_026546344.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026546344.1 |
Protein ID | XP_026402129.1 |
Gene ID | LOC113297766 |
Gene Name | NA |
Pfam domain motif | DUF974 |
Motif E-value | 6.1e-65 |
Motif start | 92 |
Motif end | 321 |
Protein seq | >XP_026402129.1 MSSTQGGSHSLAFRVMRLCRPSFQIESPLLVDPIDLLTGEDLFDDPIASSSLSRLFPSSNLTNNKSNESDLSYRHRFQLQ NPSDSMGLSGLLVLPQAFGAIYLGETFCSYISINNSSEYEVRDVVIKAEIQTEKQRILLLDTSKSPVETIRAGGRYDFIV EHDVKELGAHTLVCTALYNDGEGERKYLPQFFKFIVANPLSVRTKVRIVKENTYLEACIENHTKSNLYMDQVDFEPTQNW SATILKADEHHSEVDCSTRDIFKQPVLIKAGGGIHNFLYQLKQSSDGPAQIKVEGSNTLGKLQITWRTNLGEPGRLQTQH ILGSPFTRKEIELQIVEVPSVTLLEKPFLVRLTLTNHLDRKMGPFEIFLSRRDLQEEKAVMVNGARTLAIQQVEALSSVE FNLNLIATRVGVQKIRGITLVDHGDNRTYDPVPDYEIFVDLD* |
CDS seq | >XM_026546344.1 ATGAGTTCAACACAGGGGGGATCCCATTCATTAGCATTTAGGGTAATGAGATTATGTAGACCATCATTTCAAATCGAAAG TCCTCTTCTTGTTGACCCAATTGATTTACTTACTGGTGAAGATCTATTTGATGATCCAATTGCTTCTTCTAGTCTATCTC GACTATTCCCTTCATCTAATCTTACCAATAACAAATCAAATGAATCAGATCTCTCTTATCGTCATCGGTTTCAGCTTCAA AATCCTTCCGATTCCATGGGTCTTTCTGGTCTTCTTGTTCTTCCTCAAGCTTTTGGGGCAATTTATCTAGGAGAGACGTT TTGTAGTTATATCAGTATCAATAACAGTTCTGAATATGAAGTCCGAGATGTTGTTATTAAGGCTGAAATACAAACAGAAA AGCAGCGAATACTGCTTTTAGATACTTCAAAATCACCTGTAGAGACAATACGAGCAGGGGGTCGATATGATTTCATTGTG GAACATGATGTCAAGGAACTTGGTGCACACACGTTGGTATGCACTGCTCTGTATAATGATGGTGAAGGCGAGCGCAAGTA TCTACCTCAGTTTTTTAAGTTTATTGTTGCTAACCCACTTTCAGTACGAACAAAGGTTCGCATTGTCAAGGAAAACACGT ATTTGGAAGCTTGCATTGAAAACCATACGAAGTCAAACCTTTACATGGACCAAGTTGATTTTGAGCCTACTCAGAATTGG AGTGCAACAATACTGAAAGCTGATGAGCATCATTCAGAAGTGGATTGTAGCACAAGAGATATTTTTAAGCAACCTGTTCT CATCAAAGCTGGGGGAGGAATTCACAATTTTCTCTATCAGCTTAAGCAGTCCTCAGATGGGCCTGCACAAATTAAAGTTG AAGGTAGCAATACCCTTGGTAAGCTTCAGATAACATGGCGTACGAATTTGGGTGAACCTGGCCGTCTGCAAACACAACAT ATTCTTGGAAGTCCCTTCACACGTAAAGAGATTGAATTGCAGATTGTGGAGGTTCCTTCTGTCACCCTCTTGGAAAAACC GTTTCTGGTAAGGTTAACCCTCACAAATCATTTGGATAGGAAAATGGGCCCCTTCGAAATTTTCTTATCGCGACGGGATC TTCAAGAGGAGAAAGCTGTTATGGTTAATGGTGCGCGGACTCTGGCAATACAGCAGGTGGAAGCATTGAGCTCCGTGGAA TTCAACCTGAATCTAATTGCTACTAGAGTTGGGGTTCAAAAAATCAGAGGAATTACATTAGTAGACCATGGTGATAACAG AACGTATGATCCTGTTCCAGACTATGAGATATTTGTGGATTTAGATTGA |
Microexon DNA seq | GTTCGCATTGTCAAG |
Microexon Amino Acid seq | VRIVK |
Microexon-tag DNA Seq | CAGTTTTTTAAGTTTATTGTTGCTAACCCACTTTCAGTACGAACAAAGGTTCGCATTGTCAAGGAAAACACGTATTTGGAAGCTTGCATTGAAAACCATACGAAGTCA |
Microexon-tag Amino Acid seq | QFFKFIVANPLSVRTKVRIVKENTYLEACIENHTKS |
Transcript ID | XM_026546344.1 |
Gene ID | Ps.42580 |
Gene Name | NA |
Pfam domain motif | DUF974 |
Motif E-value | 6.1e-65 |
Motif start | 92 |
Motif end | 321 |
Protein seq | >XM_026546344.1 MSSTQGGSHSLAFRVMRLCRPSFQIESPLLVDPIDLLTGEDLFDDPIASSSLSRLFPSSNLTNNKSNESDLSYRHRFQLQ NPSDSMGLSGLLVLPQAFGAIYLGETFCSYISINNSSEYEVRDVVIKAEIQTEKQRILLLDTSKSPVETIRAGGRYDFIV EHDVKELGAHTLVCTALYNDGEGERKYLPQFFKFIVANPLSVRTKVRIVKENTYLEACIENHTKSNLYMDQVDFEPTQNW SATILKADEHHSEVDCSTRDIFKQPVLIKAGGGIHNFLYQLKQSSDGPAQIKVEGSNTLGKLQITWRTNLGEPGRLQTQH ILGSPFTRKEIELQIVEVPSVTLLEKPFLVRLTLTNHLDRKMGPFEIFLSRRDLQEEKAVMVNGARTLAIQQVEALSSVE FNLNLIATRVGVQKIRGITLVDHGDNRTYDPVPDYEIFVDLD* |
CDS seq | >XM_026546344.1 ATGAGTTCAACACAGGGGGGATCCCATTCATTAGCATTTAGGGTAATGAGATTATGTAGACCATCATTTCAAATCGAAAG TCCTCTTCTTGTTGACCCAATTGATTTACTTACTGGTGAAGATCTATTTGATGATCCAATTGCTTCTTCTAGTCTATCTC GACTATTCCCTTCATCTAATCTTACCAATAACAAATCAAATGAATCAGATCTCTCTTATCGTCATCGGTTTCAGCTTCAA AATCCTTCCGATTCCATGGGTCTTTCTGGTCTTCTTGTTCTTCCTCAAGCTTTTGGGGCAATTTATCTAGGAGAGACGTT TTGTAGTTATATCAGTATCAATAACAGTTCTGAATATGAAGTCCGAGATGTTGTTATTAAGGCTGAAATACAAACAGAAA AGCAGCGAATACTGCTTTTAGATACTTCAAAATCACCTGTAGAGACAATACGAGCAGGGGGTCGATATGATTTCATTGTG GAACATGATGTCAAGGAACTTGGTGCACACACGTTGGTATGCACTGCTCTGTATAATGATGGTGAAGGCGAGCGCAAGTA TCTACCTCAGTTTTTTAAGTTTATTGTTGCTAACCCACTTTCAGTACGAACAAAGGTTCGCATTGTCAAGGAAAACACGT ATTTGGAAGCTTGCATTGAAAACCATACGAAGTCAAACCTTTACATGGACCAAGTTGATTTTGAGCCTACTCAGAATTGG AGTGCAACAATACTGAAAGCTGATGAGCATCATTCAGAAGTGGATTGTAGCACAAGAGATATTTTTAAGCAACCTGTTCT CATCAAAGCTGGGGGAGGAATTCACAATTTTCTCTATCAGCTTAAGCAGTCCTCAGATGGGCCTGCACAAATTAAAGTTG AAGGTAGCAATACCCTTGGTAAGCTTCAGATAACATGGCGTACGAATTTGGGTGAACCTGGCCGTCTGCAAACACAACAT ATTCTTGGAAGTCCCTTCACACGTAAAGAGATTGAATTGCAGATTGTGGAGGTTCCTTCTGTCACCCTCTTGGAAAAACC GTTTCTGGTAAGGTTAACCCTCACAAATCATTTGGATAGGAAAATGGGCCCCTTCGAAATTTTCTTATCGCGACGGGATC TTCAAGAGGAGAAAGCTGTTATGGTTAATGGTGCGCGGACTCTGGCAATACAGCAGGTGGAAGCATTGAGCTCCGTGGAA TTCAACCTGAATCTAATTGCTACTAGAGTTGGGGTTCAAAAAATCAGAGGAATTACATTAGTAGACCATGGTGATAACAG AACGTATGATCCTGTTCCAGACTATGAGATATTTGTGGATTTAGATTGA |