Microexon ID Os_10:19029905-19029919:+
Species Oryza sativa
Coordinates 10:19029905..19029919
Microexon Cluster ID MEP41
Size 15
Phase 0
Pfam Domain Motif DUF974
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,15,45
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq CARTTYTTCAAGTTYATTGTTKCWAAYCCACTTTCWGTTAGRACAAAGGTYCGYRYTRTCAAGGAAACTACMTWTYTRGARGCTTGYATWGARAAYCATACAAAATCA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTTCGCACCATCAAG
Microexon Amino Acid seq VRTIK
Microexon-tag DNA Seq CAATTCTTTAAGTTCACTGTTTCAAATCCATTGTCTGTTAGAACGAAGGTTCGCACCATCAAGGATACCACTTATCTGGAAGCCTGCATAGAGAATCATACAAAATCT
Microexon-tag Amino Acid Seq QFFKFTVSNPLSVRTKVRTIKDTTYLEACIENHTKS
Microexon-tag spanning region19029713-19030419
Microexon-tag prediction score0.9611
Overlapped with the annotated transcript (%) NA
New Transcript ID NA
Reference Transcript ID NA
Gene ID NA
Gene Name NA
Os_10:19029905-19029919:+ does not have available information here.
Microexon DNA seq GTTCGCACCATCAAG
Microexon Amino Acid seq VRTIK
Microexon-tag DNA Seq CAATTCTTTAAGTTCACTGTTTCAAATCCATTGTCTGTTAGAACGAAGGTTCGCACCATCAAGGATACCACTTATCTGGAAGCCTGCATAGAGAATCATACAAAATCT
Microexon-tag Amino Acid seq QFFKFTVSNPLSVRTKVRTIKDTTYLEACIENHTKS
Transcript ID Os.6901.2
Gene ID Os.6901
Gene Name NA
Pfam domain motif DUF974
Motif E-value 6.5e-65
Motif start 123
Motif end 352
Protein seq >Os.6901.2
MASPYTGAQPPYPAGAHQPPPPAQALLQQNHSLAFRVMRLSRPSLQPDQAAALRFDPRDVFLPEDALTGPDPSASSAADA
AAFLQGLLHPLDSPATTVPGDFTFRDRFLLRDPVDALALPGLLVLPQSFGAIYLGETFCSYISINNSSSFEARDVAIKAE
IQTERQRILLLDTSKAPVESIRSGGRYDFIVEHDVKELGAHTLVCTALYNDGDGERKYLPQFFKFTVSNPLSVRTKVRTI
KDTTYLEACIENHTKSNLYMDQVDFEPSQQWAATRLEADEHPSTVKSIIGDLCKQPILIRAGGGIYNYLYQLRPSSGESG
QTKAEGSSILGKFQITWRTNLGEPGRLQTQNIHSTPTASKDVDLRAVKVPPVIFLERPFMVNLCLTNQSDKTVGPFEVFL
APSVLDEEKYVLVNGLQKLVLPLVEAFESINFDLSMVATQVGVQKISGITLYAVQEKKLYEPLSDIEIFVDAE*
CDS seq >Os.6901.2
ATGGCGTCGCCCTACACCGGCGCGCAGCCGCCGTATCCGGCGGGGGCGCACCAGCCGCCGCCGCCGGCGCAGGCGCTGCT
GCAGCAGAACCACTCGCTGGCGTTCCGCGTGATGCGGCTGTCCCGCCCCTCGCTGCAGCCCGACCAGGCCGCCGCGCTCC
GCTTCGACCCGCGCGACGTCTTCCTCCCCGAGGACGCCCTCACGGGGCCCGACCCCTCCGCCTCCTCCGCCGCCGACGCC
GCCGCCTTCCTCCAGGGCCTCCTCCACCCGCTCGACTCGCCGGCCACCACCGTCCCCGGCGACTTCACCTTCCGCGACCG
CTTCCTCCTCCGCGACCCCGTCGACGCCCTCGCGCTCCCCGGCCTCCTCGTCCTCCCGCAATCCTTCGGGGCGATCTATT
TGGGGGAGACCTTCTGCAGCTACATCAGCATCAACAATAGCTCCAGCTTCGAGGCCAGGGACGTCGCCATTAAGGCAGAA
ATACAAACCGAGAGACAGAGGATACTTCTTTTGGATACATCTAAGGCCCCTGTTGAGTCAATCAGATCTGGGGGTAGATA
TGATTTCATTGTGGAACATGATGTCAAAGAACTGGGAGCACATACGCTTGTCTGCACTGCTTTATATAATGATGGTGATG
GGGAGCGTAAATATCTTCCTCAATTCTTTAAGTTCACTGTTTCAAATCCATTGTCTGTTAGAACGAAGGTTCGCACCATC
AAGGATACCACTTATCTGGAAGCCTGCATAGAGAATCATACAAAATCTAATCTTTATATGGACCAAGTTGATTTTGAACC
TTCCCAACAATGGGCAGCTACAAGATTAGAAGCCGATGAACATCCGTCAACAGTGAAGTCTATAATCGGGGACTTGTGCA
AGCAACCGATTCTCATCAGAGCTGGAGGAGGAATATACAATTACCTATATCAACTCAGACCATCGTCTGGTGAGTCTGGT
CAAACAAAGGCAGAGGGAAGCAGCATACTCGGGAAATTTCAGATCACATGGCGGACAAATCTCGGGGAGCCTGGCCGTTT
GCAAACTCAAAACATACATAGCACTCCCACTGCAAGCAAAGATGTTGATCTTCGTGCTGTGAAAGTTCCACCTGTGATAT
TTCTGGAAAGACCATTTATGGTTAATTTATGCCTTACAAACCAATCAGACAAGACAGTTGGCCCTTTTGAAGTATTTTTA
GCACCAAGCGTACTTGATGAAGAGAAATATGTTCTGGTCAATGGATTACAGAAGTTGGTTTTGCCACTAGTTGAGGCTTT
TGAATCCATCAACTTTGACTTGAGTATGGTAGCTACTCAAGTAGGCGTGCAAAAAATTTCTGGAATTACACTGTATGCCG
TGCAGGAAAAGAAGCTTTACGAACCTTTGTCAGACATAGAGATTTTCGTTGATGCAGAATAG