
Microexon ID | Os_10:19029905-19029919:+ |
Species | Oryza sativa | Coordinates | 10:19029905..19029919 |
Microexon Cluster ID | MEP41 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | DUF974 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CARTTYTTCAAGTTYATTGTTKCWAAYCCACTTTCWGTTAGRACAAAGGTYCGYRYTRTCAAGGAAACTACMTWTYTRGARGCTTGYATWGARAAYCATACAAAATCA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTTCGCACCATCAAG |
Microexon Amino Acid seq | VRTIK |
Microexon-tag DNA Seq | CAATTCTTTAAGTTCACTGTTTCAAATCCATTGTCTGTTAGAACGAAGGTTCGCACCATCAAGGATACCACTTATCTGGAAGCCTGCATAGAGAATCATACAAAATCT |
Microexon-tag Amino Acid Seq | QFFKFTVSNPLSVRTKVRTIKDTTYLEACIENHTKS |
Microexon-tag spanning region | 19029713-19030419 |
Microexon-tag prediction score | 0.9611 |
Overlapped with the annotated transcript (%) | NA |
New Transcript ID | NA |
Reference Transcript ID | NA |
Gene ID | NA |
Gene Name | NA |
Os_10:19029905-19029919:+ does not have available information here.
Microexon DNA seq | GTTCGCACCATCAAG |
Microexon Amino Acid seq | VRTIK |
Microexon-tag DNA Seq | CAATTCTTTAAGTTCACTGTTTCAAATCCATTGTCTGTTAGAACGAAGGTTCGCACCATCAAGGATACCACTTATCTGGAAGCCTGCATAGAGAATCATACAAAATCT |
Microexon-tag Amino Acid seq | QFFKFTVSNPLSVRTKVRTIKDTTYLEACIENHTKS |
Transcript ID | Os.6901.2 |
Gene ID | Os.6901 |
Gene Name | NA |
Pfam domain motif | DUF974 |
Motif E-value | 6.5e-65 |
Motif start | 123 |
Motif end | 352 |
Protein seq | >Os.6901.2 MASPYTGAQPPYPAGAHQPPPPAQALLQQNHSLAFRVMRLSRPSLQPDQAAALRFDPRDVFLPEDALTGPDPSASSAADA AAFLQGLLHPLDSPATTVPGDFTFRDRFLLRDPVDALALPGLLVLPQSFGAIYLGETFCSYISINNSSSFEARDVAIKAE IQTERQRILLLDTSKAPVESIRSGGRYDFIVEHDVKELGAHTLVCTALYNDGDGERKYLPQFFKFTVSNPLSVRTKVRTI KDTTYLEACIENHTKSNLYMDQVDFEPSQQWAATRLEADEHPSTVKSIIGDLCKQPILIRAGGGIYNYLYQLRPSSGESG QTKAEGSSILGKFQITWRTNLGEPGRLQTQNIHSTPTASKDVDLRAVKVPPVIFLERPFMVNLCLTNQSDKTVGPFEVFL APSVLDEEKYVLVNGLQKLVLPLVEAFESINFDLSMVATQVGVQKISGITLYAVQEKKLYEPLSDIEIFVDAE* |
CDS seq | >Os.6901.2 ATGGCGTCGCCCTACACCGGCGCGCAGCCGCCGTATCCGGCGGGGGCGCACCAGCCGCCGCCGCCGGCGCAGGCGCTGCT GCAGCAGAACCACTCGCTGGCGTTCCGCGTGATGCGGCTGTCCCGCCCCTCGCTGCAGCCCGACCAGGCCGCCGCGCTCC GCTTCGACCCGCGCGACGTCTTCCTCCCCGAGGACGCCCTCACGGGGCCCGACCCCTCCGCCTCCTCCGCCGCCGACGCC GCCGCCTTCCTCCAGGGCCTCCTCCACCCGCTCGACTCGCCGGCCACCACCGTCCCCGGCGACTTCACCTTCCGCGACCG CTTCCTCCTCCGCGACCCCGTCGACGCCCTCGCGCTCCCCGGCCTCCTCGTCCTCCCGCAATCCTTCGGGGCGATCTATT TGGGGGAGACCTTCTGCAGCTACATCAGCATCAACAATAGCTCCAGCTTCGAGGCCAGGGACGTCGCCATTAAGGCAGAA ATACAAACCGAGAGACAGAGGATACTTCTTTTGGATACATCTAAGGCCCCTGTTGAGTCAATCAGATCTGGGGGTAGATA TGATTTCATTGTGGAACATGATGTCAAAGAACTGGGAGCACATACGCTTGTCTGCACTGCTTTATATAATGATGGTGATG GGGAGCGTAAATATCTTCCTCAATTCTTTAAGTTCACTGTTTCAAATCCATTGTCTGTTAGAACGAAGGTTCGCACCATC AAGGATACCACTTATCTGGAAGCCTGCATAGAGAATCATACAAAATCTAATCTTTATATGGACCAAGTTGATTTTGAACC TTCCCAACAATGGGCAGCTACAAGATTAGAAGCCGATGAACATCCGTCAACAGTGAAGTCTATAATCGGGGACTTGTGCA AGCAACCGATTCTCATCAGAGCTGGAGGAGGAATATACAATTACCTATATCAACTCAGACCATCGTCTGGTGAGTCTGGT CAAACAAAGGCAGAGGGAAGCAGCATACTCGGGAAATTTCAGATCACATGGCGGACAAATCTCGGGGAGCCTGGCCGTTT GCAAACTCAAAACATACATAGCACTCCCACTGCAAGCAAAGATGTTGATCTTCGTGCTGTGAAAGTTCCACCTGTGATAT TTCTGGAAAGACCATTTATGGTTAATTTATGCCTTACAAACCAATCAGACAAGACAGTTGGCCCTTTTGAAGTATTTTTA GCACCAAGCGTACTTGATGAAGAGAAATATGTTCTGGTCAATGGATTACAGAAGTTGGTTTTGCCACTAGTTGAGGCTTT TGAATCCATCAACTTTGACTTGAGTATGGTAGCTACTCAAGTAGGCGTGCAAAAAATTTCTGGAATTACACTGTATGCCG TGCAGGAAAAGAAGCTTTACGAACCTTTGTCAGACATAGAGATTTTCGTTGATGCAGAATAG |