
Microexon ID | Ha_4:168279614-168279628:- |
Species | Helianthus annuus | Coordinates | 4:168279614..168279628 |
Microexon Cluster ID | MEP41 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | DUF974 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CARTTYTTCAAGTTYATTGTTKCWAAYCCACTTTCWGTTAGRACAAAGGTYCGYRYTRTCAAGGAAACTACMTWTYTRGARGCTTGYATWGARAAYCATACAAAATCA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTCCGCGTTGTGAAG |
Microexon Amino Acid seq | VRVVK |
Microexon-tag DNA Seq | CAGTATTTCAAGTTCATGGTTTCAAATCCCCTTTCTGTTAGGACAAAGGTCCGCGTTGTGAAGGACACTACTTATCTGGAGACTTGCCTAGAAAATAATACAAAATCA |
Microexon-tag Amino Acid Seq | QYFKFMVSNPLSVRTKVRVVKDTTYLETCLENNTKS |
Microexon-tag spanning region | 168279372-168280125 |
Microexon-tag prediction score | 0.9675 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OTG29608x |
Reference Transcript ID | OTG29608 |
Gene ID | HannXRQ_Chr04g0124141 |
Gene Name | NA |
Transcript ID | OTG29608 |
Protein ID | OTG29608 |
Gene ID | HannXRQ_Chr04g0124141 |
Gene Name | NA |
Pfam domain motif | DUF974 |
Motif E-value | 1.5e-60 |
Motif start | 88 |
Motif end | 314 |
Protein seq | >OTG29608 MSSTQSLHSLAFRVMRLCRPTFHVETPLQFDPCDLVVGEDLFDSPSAAPRHLLHSHSASNDSSSADLTYRNRFVLGDDSD AMGLPGLLVLPQSFGAIYLGETFCSYISINNSSNFDARDIIIKSEIQTERQRIMLLDTSKSPVESIRAGGRYDFIVEHDV KELGAHTLVCTALYYDGDAERKYLPQYFKFMVSNPLSVRTKVRVVKDTTYLETCLENNTKSNLFMDQVEFEPAPRWSATI LKADVHHSEKGGSTRETFKPPVLIRAGGGIYNYLYALKMSSAPTKGEGSNILGKLQITWRTNLGEPGRLQTQHITGNPIT RKEIDLKVVKVPSVIILEKPFLVHLSLTNLTGKKLGPFEAWLSLNDSKEEKAVMISGLQRMDLPAVEAFASLEFQLNLIS AKLGVQKISGITVFDTMEKKTYDPLPDLEIFVDTDL* |
CDS seq | >OTG29608 ATGAGCAGCACACAATCGTTGCACTCGCTGGCCTTCAGGGTAATGCGGCTATGCCGTCCGACATTCCACGTCGAAACTCC TCTCCAGTTCGATCCTTGCGATCTTGTCGTTGGCGAGGATCTGTTCGACAGTCCTTCAGCCGCCCCTCGCCACCTTCTTC ACTCTCATTCCGCCTCTAATGATTCGTCATCTGCCGATCTCACCTACCGCAACCGCTTTGTTCTCGGTGATGATTCCGAT GCCATGGGGCTCCCTGGTCTCCTTGTTCTCCCTCAGTCCTTCGGGGCAATATATCTTGGGGAGACATTTTGTAGTTATAT AAGCATTAACAACAGCTCAAATTTTGATGCCAGGGATATAATAATCAAGTCTGAAATACAAACAGAAAGGCAGAGAATAA TGCTTTTAGATACATCAAAATCACCTGTTGAAAGCATAAGAGCAGGAGGACGCTACGACTTCATCGTTGAACATGATGTG AAGGAACTTGGTGCACACACATTGGTCTGTACTGCTCTGTATTATGACGGTGATGCCGAACGCAAGTATCTTCCACAGTA TTTCAAGTTCATGGTTTCAAATCCCCTTTCTGTTAGGACAAAGGTCCGCGTTGTGAAGGACACTACTTATCTGGAGACTT GCCTAGAAAATAATACAAAATCAAACCTATTCATGGACCAAGTTGAATTTGAGCCAGCTCCACGGTGGAGTGCGACAATA CTTAAAGCCGATGTCCACCATTCAGAAAAGGGTGGTTCTACTAGAGAAACATTCAAACCACCTGTTCTTATTAGAGCAGG TGGAGGAATTTATAATTATCTTTATGCATTGAAAATGTCATCTGCACCTACAAAAGGCGAGGGGAGTAATATTCTTGGTA AACTTCAGATAACATGGCGTACAAATTTGGGTGAACCCGGGCGCCTGCAAACACAACATATAACTGGCAATCCCATCACG CGAAAAGAGATTGATTTGAAGGTAGTAAAAGTGCCATCTGTTATCATCTTAGAAAAACCCTTTCTGGTGCATTTGAGTCT CACAAACTTAACTGGAAAGAAGCTGGGGCCCTTTGAAGCTTGGTTATCCCTCAATGATTCAAAAGAGGAAAAGGCTGTTA TGATTAGTGGACTTCAAAGGATGGATTTACCAGCGGTGGAGGCATTTGCATCGTTGGAGTTTCAACTGAATTTGATCTCT GCCAAACTTGGAGTGCAGAAAATCAGTGGCATTACGGTGTTTGATACGATGGAGAAAAAAACCTATGACCCGTTACCCGA TCTAGAAATATTCGTCGATACAGATCTATAA |
Microexon DNA seq | GTCCGCGTTGTGAAG |
Microexon Amino Acid seq | VRVVK |
Microexon-tag DNA Seq | CAGTATTTCAAGTTCATGGTTTCAAATCCCCTTTCTGTTAGGACAAAGGTCCGCGTTGTGAAGGACACTACTTATCTGGAGACTTGCCTAGAAAATAATACAAAATCA |
Microexon-tag Amino Acid seq | QYFKFMVSNPLSVRTKVRVVKDTTYLETCLENNTKS |
Transcript ID | OTG29608 |
Gene ID | Ha.42616 |
Gene Name | NA |
Pfam domain motif | DUF974 |
Motif E-value | 1.5e-60 |
Motif start | 88 |
Motif end | 314 |
Protein seq | >OTG29608 MSSTQSLHSLAFRVMRLCRPTFHVETPLQFDPCDLVVGEDLFDSPSAAPRHLLHSHSASNDSSSADLTYRNRFVLGDDSD AMGLPGLLVLPQSFGAIYLGETFCSYISINNSSNFDARDIIIKSEIQTERQRIMLLDTSKSPVESIRAGGRYDFIVEHDV KELGAHTLVCTALYYDGDAERKYLPQYFKFMVSNPLSVRTKVRVVKDTTYLETCLENNTKSNLFMDQVEFEPAPRWSATI LKADVHHSEKGGSTRETFKPPVLIRAGGGIYNYLYALKMSSAPTKGEGSNILGKLQITWRTNLGEPGRLQTQHITGNPIT RKEIDLKVVKVPSVIILEKPFLVHLSLTNLTGKKLGPFEAWLSLNDSKEEKAVMISGLQRMDLPAVEAFASLEFQLNLIS AKLGVQKISGITVFDTMEKKTYDPLPDLEIFVDTDL* |
CDS seq | >OTG29608 ATGAGCAGCACACAATCGTTGCACTCGCTGGCCTTCAGGGTAATGCGGCTATGCCGTCCGACATTCCACGTCGAAACTCC TCTCCAGTTCGATCCTTGCGATCTTGTCGTTGGCGAGGATCTGTTCGACAGTCCTTCAGCCGCCCCTCGCCACCTTCTTC ACTCTCATTCCGCCTCTAATGATTCGTCATCTGCCGATCTCACCTACCGCAACCGCTTTGTTCTCGGTGATGATTCCGAT GCCATGGGGCTCCCTGGTCTCCTTGTTCTCCCTCAGTCCTTCGGGGCAATATATCTTGGGGAGACATTTTGTAGTTATAT AAGCATTAACAACAGCTCAAATTTTGATGCCAGGGATATAATAATCAAGTCTGAAATACAAACAGAAAGGCAGAGAATAA TGCTTTTAGATACATCAAAATCACCTGTTGAAAGCATAAGAGCAGGAGGACGCTACGACTTCATCGTTGAACATGATGTG AAGGAACTTGGTGCACACACATTGGTCTGTACTGCTCTGTATTATGACGGTGATGCCGAACGCAAGTATCTTCCACAGTA TTTCAAGTTCATGGTTTCAAATCCCCTTTCTGTTAGGACAAAGGTCCGCGTTGTGAAGGACACTACTTATCTGGAGACTT GCCTAGAAAATAATACAAAATCAAACCTATTCATGGACCAAGTTGAATTTGAGCCAGCTCCACGGTGGAGTGCGACAATA CTTAAAGCCGATGTCCACCATTCAGAAAAGGGTGGTTCTACTAGAGAAACATTCAAACCACCTGTTCTTATTAGAGCAGG TGGAGGAATTTATAATTATCTTTATGCATTGAAAATGTCATCTGCACCTACAAAAGGCGAGGGGAGTAATATTCTTGGTA AACTTCAGATAACATGGCGTACAAATTTGGGTGAACCCGGGCGCCTGCAAACACAACATATAACTGGCAATCCCATCACG CGAAAAGAGATTGATTTGAAGGTAGTAAAAGTGCCATCTGTTATCATCTTAGAAAAACCCTTTCTGGTGCATTTGAGTCT CACAAACTTAACTGGAAAGAAGCTGGGGCCCTTTGAAGCTTGGTTATCCCTCAATGATTCAAAAGAGGAAAAGGCTGTTA TGATTAGTGGACTTCAAAGGATGGATTTACCAGCGGTGGAGGCATTTGCATCGTTGGAGTTTCAACTGAATTTGATCTCT GCCAAACTTGGAGTGCAGAAAATCAGTGGCATTACGGTGTTTGATACGATGGAGAAAAAAACCTATGACCCGTTACCCGA TCTAGAAATATTCGTCGATACAGATCTATAA |