
Microexon ID | At_2:19626814-19626828:+ |
Species | Arabidopsis thaliana | Coordinates | 2:19626814..19626828 |
Microexon Cluster ID | MEP41 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | DUF974 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CARTTYTTCAAGTTYATTGTTKCWAAYCCACTTTCWGTTAGRACAAAGGTYCGYRYTRTCAAGGAAACTACMTWTYTRGARGCTTGYATWGARAAYCATACAAAATCA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTTCGAGTTGTAAAG |
Microexon Amino Acid seq | VRVVK |
Microexon-tag DNA Seq | CAGTTTTTCAAGTTTGTCGTTGCAAACCCACTCTCAGTGAGGACCAAGGTTCGAGTTGTAAAGGAGACGACATTTTTAGAGGCTTGCATTGAGAACCATACAAAAGCA |
Microexon-tag Amino Acid Seq | QFFKFVVANPLSVRTKVRVVKETTFLEACIENHTKA |
Microexon-tag spanning region | 19626667-19627278 |
Microexon-tag prediction score | 0.9638 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT2G47960.1x |
Reference Transcript ID | AT2G47960.1 |
Gene ID | AT2G47960 |
Gene Name | NA |
Transcript ID | AT2G47960.1 |
Protein ID | AT2G47960.1 |
Gene ID | AT2G47960 |
Gene Name | NA |
Pfam domain motif | DUF974 |
Motif E-value | 2.6e-66 |
Motif start | 90 |
Motif end | 321 |
Protein seq | >AT2G47960.1 MSATQTQTHGPHSLAFRVMRLCKPSFHVDPPLRIDPFDLLAGEDFSDDPSSASLFRRHVSSADAVDSDLSYRNRFLLNHP TDPIGLSGLLLLPQSFGAIYLGETFCSYISVNNSSTSEVRDVTIKAEIQTERQRILLLDTSKSPVESIRTGGRYDFIVEH DVKELGAHTLVCSALYNDADGERKYLPQFFKFVVANPLSVRTKVRVVKETTFLEACIENHTKANLFMDQVDFEPAKQWSA VRLQNEDSTEDPPTSGLSGLIPKPPVIIRSGGGIHNYLYKLNPSADVSGQTKFQGSNILGKFQITWRTNLGEPGRLQTQQ ILGAPVSRKEINMRVVEVPAVIHLNRPFRAYLNLTNQTDRQLGPFEVSLSQDETQLEKPVGINGLQTLMLPRIEAFGSND FQLNLIASKLGVQKIAGITALDTREKKTYELVPDMEIFVETD* |
CDS seq | >AT2G47960.1 ATGAGCGCGACGCAGACGCAGACGCATGGACCGCACTCGCTGGCCTTCAGGGTGATGCGACTCTGCAAACCGTCTTTCCA CGTCGATCCTCCCCTCCGCATTGACCCTTTCGATCTTCTCGCCGGCGAGGATTTCTCCGACGATCCCTCTTCCGCCTCCT TGTTCCGCCGCCACGTATCTTCTGCCGACGCTGTCGACTCCGATCTCAGCTACCGAAATAGATTCCTCCTCAACCATCCT ACCGATCCAATCGGTCTCTCTGGTCTTCTGCTTCTTCCTCAGTCCTTCGGAGCGATCTATCTCGGAGAAACATTCTGTAG CTATATCAGCGTCAACAATAGTTCCACTTCAGAAGTTCGGGATGTTACCATTAAGGCAGAAATTCAGACAGAGAGGCAGA GGATTCTACTTCTGGATACATCCAAGTCACCTGTTGAATCGATACGGACAGGTGGACGCTATGATTTCATAGTTGAACAC GATGTGAAAGAGCTTGGAGCTCACACGTTGGTTTGCTCTGCATTGTACAATGACGCTGATGGTGAGCGTAAATATCTTCC CCAGTTTTTCAAGTTTGTCGTTGCAAACCCACTCTCAGTGAGGACCAAGGTTCGAGTTGTAAAGGAGACGACATTTTTAG AGGCTTGCATTGAGAACCATACAAAAGCAAACCTCTTTATGGACCAAGTTGATTTTGAACCTGCTAAGCAATGGAGTGCT GTAAGATTACAGAATGAAGACTCAACAGAAGATCCTCCAACCAGTGGTCTTAGTGGACTGATACCTAAACCGCCAGTTAT AATCCGATCTGGCGGGGGTATCCACAACTATCTCTACAAGTTAAACCCATCTGCAGATGTTTCCGGGCAAACAAAATTCC AGGGAAGTAATATCCTGGGTAAATTTCAAATAACATGGCGCACAAATTTGGGTGAACCTGGTCGCTTACAAACACAACAA ATTCTCGGCGCTCCAGTAAGCCGTAAAGAGATTAATATGCGAGTTGTAGAGGTTCCAGCTGTTATACACTTAAATAGACC CTTTCGGGCATACTTGAATCTCACAAACCAAACTGATAGGCAACTGGGACCCTTCGAGGTCTCACTGTCACAAGATGAAA CACAATTGGAGAAGCCGGTTGGTATTAATGGTCTCCAGACTCTGATGTTACCCAGGATTGAAGCATTTGGCTCCAATGAT TTCCAATTGAATCTTATTGCCTCCAAGCTGGGAGTCCAGAAAATCGCTGGGATCACGGCCTTGGACACAAGAGAGAAAAA AACCTACGAACTTGTTCCAGATATGGAGATATTTGTAGAGACAGACTAA |
Microexon DNA seq | GTTCGAGTTGTAAAG |
Microexon Amino Acid seq | VRVVK |
Microexon-tag DNA Seq | CAGTTTTTCAAGTTTGTCGTTGCAAACCCACTCTCAGTGAGGACCAAGGTTCGAGTTGTAAAGGAGACGACATTTTTAGAGGCTTGCATTGAGAACCATACAAAAGCA |
Microexon-tag Amino Acid seq | QFFKFVVANPLSVRTKVRVVKETTFLEACIENHTKA |
Transcript ID | AT2G47960.1 |
Gene ID | At.11855 |
Gene Name | NA |
Pfam domain motif | DUF974 |
Motif E-value | 2.6e-66 |
Motif start | 90 |
Motif end | 321 |
Protein seq | >AT2G47960.1 MSATQTQTHGPHSLAFRVMRLCKPSFHVDPPLRIDPFDLLAGEDFSDDPSSASLFRRHVSSADAVDSDLSYRNRFLLNHP TDPIGLSGLLLLPQSFGAIYLGETFCSYISVNNSSTSEVRDVTIKAEIQTERQRILLLDTSKSPVESIRTGGRYDFIVEH DVKELGAHTLVCSALYNDADGERKYLPQFFKFVVANPLSVRTKVRVVKETTFLEACIENHTKANLFMDQVDFEPAKQWSA VRLQNEDSTEDPPTSGLSGLIPKPPVIIRSGGGIHNYLYKLNPSADVSGQTKFQGSNILGKFQITWRTNLGEPGRLQTQQ ILGAPVSRKEINMRVVEVPAVIHLNRPFRAYLNLTNQTDRQLGPFEVSLSQDETQLEKPVGINGLQTLMLPRIEAFGSND FQLNLIASKLGVQKIAGITALDTREKKTYELVPDMEIFVETD* |
CDS seq | >AT2G47960.1 ATGAGCGCGACGCAGACGCAGACGCATGGACCGCACTCGCTGGCCTTCAGGGTGATGCGACTCTGCAAACCGTCTTTCCA CGTCGATCCTCCCCTCCGCATTGACCCTTTCGATCTTCTCGCCGGCGAGGATTTCTCCGACGATCCCTCTTCCGCCTCCT TGTTCCGCCGCCACGTATCTTCTGCCGACGCTGTCGACTCCGATCTCAGCTACCGAAATAGATTCCTCCTCAACCATCCT ACCGATCCAATCGGTCTCTCTGGTCTTCTGCTTCTTCCTCAGTCCTTCGGAGCGATCTATCTCGGAGAAACATTCTGTAG CTATATCAGCGTCAACAATAGTTCCACTTCAGAAGTTCGGGATGTTACCATTAAGGCAGAAATTCAGACAGAGAGGCAGA GGATTCTACTTCTGGATACATCCAAGTCACCTGTTGAATCGATACGGACAGGTGGACGCTATGATTTCATAGTTGAACAC GATGTGAAAGAGCTTGGAGCTCACACGTTGGTTTGCTCTGCATTGTACAATGACGCTGATGGTGAGCGTAAATATCTTCC CCAGTTTTTCAAGTTTGTCGTTGCAAACCCACTCTCAGTGAGGACCAAGGTTCGAGTTGTAAAGGAGACGACATTTTTAG AGGCTTGCATTGAGAACCATACAAAAGCAAACCTCTTTATGGACCAAGTTGATTTTGAACCTGCTAAGCAATGGAGTGCT GTAAGATTACAGAATGAAGACTCAACAGAAGATCCTCCAACCAGTGGTCTTAGTGGACTGATACCTAAACCGCCAGTTAT AATCCGATCTGGCGGGGGTATCCACAACTATCTCTACAAGTTAAACCCATCTGCAGATGTTTCCGGGCAAACAAAATTCC AGGGAAGTAATATCCTGGGTAAATTTCAAATAACATGGCGCACAAATTTGGGTGAACCTGGTCGCTTACAAACACAACAA ATTCTCGGCGCTCCAGTAAGCCGTAAAGAGATTAATATGCGAGTTGTAGAGGTTCCAGCTGTTATACACTTAAATAGACC CTTTCGGGCATACTTGAATCTCACAAACCAAACTGATAGGCAACTGGGACCCTTCGAGGTCTCACTGTCACAAGATGAAA CACAATTGGAGAAGCCGGTTGGTATTAATGGTCTCCAGACTCTGATGTTACCCAGGATTGAAGCATTTGGCTCCAATGAT TTCCAATTGAATCTTATTGCCTCCAAGCTGGGAGTCCAGAAAATCGCTGGGATCACGGCCTTGGACACAAGAGAGAAAAA AACCTACGAACTTGTTCCAGATATGGAGATATTTGTAGAGACAGACTAA |