
Microexon ID | Vv_4:10612113-10612126:+ |
Species | Vistis vinifera | Coordinates | 4:10612113..10612126 |
Microexon Cluster ID | MEP40 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | SBP_bac_10 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GTYATCCCMYTRKCMAACTWYTCHRTBGAYRCCRMTTATTTTCCAGTKTCMTTCTTYGAGCTTYTAGGWYTRCTRGVRARCWTGAARGGCATMACATCAGAMWMRGTR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTCCTTCTTTGAG |
Microexon Amino Acid seq | VSFFE |
Microexon-tag DNA Seq | GTGATTCCCTTGTCCAACTACTCTGTTGATACAGAGTATTTTCCAGTTTCCTTCTTTGAGCTCTTGGGTTCAGTGGGGAACTTGAAGGGCATGACATCAGAGTCCGTG |
Microexon-tag Amino Acid Seq | VIPLSNYSVDTEYFPVSFFELLGSVGNLKGMTSESV |
Microexon-tag spanning region | 10610065-10613041 |
Microexon-tag prediction score | 0.9563 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | VIT_04s0079g00260.t01x |
Reference Transcript ID | VIT_04s0079g00260.t01 |
Gene ID | VIT_04s0079g00260 |
Gene Name | NA |
Transcript ID | VIT_04s0079g00260.t01 |
Protein ID | VIT_04s0079g00260.t01 |
Gene ID | VIT_04s0079g00260 |
Gene Name | NA |
Pfam domain motif | SBP_bac_10 |
Motif E-value | 0.21 |
Motif start | 73 |
Motif end | 117 |
Protein seq | >VIT_04s0079g00260.t01 MLQYIFFFFLFLLVGGRGRLQTGVSADIESVKVGNISKVEDAVYFHVYYGQTFKVIKNGVDGKSYLLIQDNSRMAARTKY CTARIKSFVIPLSNYSVDTEYFPVSFFELLGSVGNLKGMTSESVASECVLKSYEQGEIHIISKSEPQLLHQFSAHFISNT DQPQACNFASFLPSEEDTPLQRAEWIKYLGVFSNLEVRANAVYDAVKENYMCLTKVAANKSAAASFKPIVAWMNYNDGVW SFTKDTYKLKYVEDAGGENVDASINKITYNISNPDDLDELHAILCSTVDVVIDESYTSDPVGYNVSTFLQTINVEEYSCF TFLTNKSLWRYDKRIQNSTTIDWFDGAISQPQLVLADLVEALFPTGSYTTTYLRNLAKEEGVINIKSEMCDRDSSTAMEP TILACQL* |
CDS seq | >VIT_04s0079g00260.t01 ATGTTGCAGTACATCTTCTTCTTCTTCTTGTTTTTGTTGGTGGGTGGTCGTGGGCGGCTTCAGACTGGTGTGAGTGCAGA CATAGAAAGTGTGAAGGTGGGTAACATTTCAAAGGTGGAAGATGCAGTGTACTTCCATGTATATTATGGGCAGACATTCA AGGTCATTAAGAATGGGGTTGATGGCAAGAGCTATCTTCTCATCCAGGATAATTCAAGAATGGCAGCAAGGACAAAATAC TGCACAGCAAGGATCAAATCATTTGTGATTCCCTTGTCCAACTACTCTGTTGATACAGAGTATTTTCCAGTTTCCTTCTT TGAGCTCTTGGGTTCAGTGGGGAACTTGAAGGGCATGACATCAGAGTCCGTGGCTTCAGAATGCGTCTTAAAATCATACG AACAAGGAGAAATCCATATAATCAGTAAGAGTGAGCCACAGCTGCTTCACCAATTTTCAGCTCATTTTATTAGCAACACT GATCAACCACAAGCCTGCAATTTTGCTTCTTTTCTTCCTTCCGAAGAGGACACTCCCCTCCAGCGGGCTGAATGGATCAA ATACTTGGGAGTTTTTTCAAACCTTGAGGTCAGAGCCAATGCAGTCTATGACGCGGTTAAAGAGAATTATATGTGCTTGA CTAAAGTTGCTGCAAACAAGAGTGCCGCAGCATCATTCAAGCCAATAGTTGCATGGATGAATTATAACGATGGTGTCTGG TCTTTTACAAAGGACACATACAAGCTAAAGTATGTGGAAGATGCAGGTGGGGAGAATGTGGATGCCTCCATCAACAAAAT TACCTATAACATTTCTAATCCTGATGATTTGGACGAACTGCATGCCATATTATGTTCAACTGTGGATGTGGTGATTGATG AAAGTTACACTTCTGATCCTGTGGGCTACAATGTCTCCACCTTCCTCCAAACTATAAATGTTGAAGAGTACTCTTGTTTC ACTTTTCTCACAAACAAAAGCTTATGGAGATACGATAAAAGAATCCAAAACTCAACCACTATAGACTGGTTTGATGGAGC CATTTCGCAGCCTCAACTAGTTTTAGCAGATCTAGTTGAAGCTTTGTTTCCAACAGGAAGTTATACAACAACATACCTGA GGAATCTTGCAAAGGAAGAAGGTGTCATTAATATCAAATCTGAGATGTGTGACAGAGATAGTTCCACTGCTATGGAACCC ACAATTCTAGCTTGCCAATTATAA |
Microexon DNA seq | TTTCCTTCTTTGAG |
Microexon Amino Acid seq | VSFFE |
Microexon-tag DNA Seq | GTGATTCCCTTGTCCAACTACTCTGTTGATACAGAGTATTTTCCAGTTTCCTTCTTTGAGCTCTTGGGTTCAGTGGGGAACTTGAAGGGCATGACATCAGAGTCCGTG |
Microexon-tag Amino Acid seq | VIPLSNYSVDTEYFPVSFFELLGSVGNLKGMTSESV |
Transcript ID | VIT_04s0079g00260.t01 |
Gene ID | Vv.23320 |
Gene Name | NA |
Pfam domain motif | SBP_bac_10 |
Motif E-value | 0.21 |
Motif start | 73 |
Motif end | 117 |
Protein seq | >VIT_04s0079g00260.t01 MLQYIFFFFLFLLVGGRGRLQTGVSADIESVKVGNISKVEDAVYFHVYYGQTFKVIKNGVDGKSYLLIQDNSRMAARTKY CTARIKSFVIPLSNYSVDTEYFPVSFFELLGSVGNLKGMTSESVASECVLKSYEQGEIHIISKSEPQLLHQFSAHFISNT DQPQACNFASFLPSEEDTPLQRAEWIKYLGVFSNLEVRANAVYDAVKENYMCLTKVAANKSAAASFKPIVAWMNYNDGVW SFTKDTYKLKYVEDAGGENVDASINKITYNISNPDDLDELHAILCSTVDVVIDESYTSDPVGYNVSTFLQTINVEEYSCF TFLTNKSLWRYDKRIQNSTTIDWFDGAISQPQLVLADLVEALFPTGSYTTTYLRNLAKEEGVINIKSEMCDRDSSTAMEP TILACQL* |
CDS seq | >VIT_04s0079g00260.t01 ATGTTGCAGTACATCTTCTTCTTCTTCTTGTTTTTGTTGGTGGGTGGTCGTGGGCGGCTTCAGACTGGTGTGAGTGCAGA CATAGAAAGTGTGAAGGTGGGTAACATTTCAAAGGTGGAAGATGCAGTGTACTTCCATGTATATTATGGGCAGACATTCA AGGTCATTAAGAATGGGGTTGATGGCAAGAGCTATCTTCTCATCCAGGATAATTCAAGAATGGCAGCAAGGACAAAATAC TGCACAGCAAGGATCAAATCATTTGTGATTCCCTTGTCCAACTACTCTGTTGATACAGAGTATTTTCCAGTTTCCTTCTT TGAGCTCTTGGGTTCAGTGGGGAACTTGAAGGGCATGACATCAGAGTCCGTGGCTTCAGAATGCGTCTTAAAATCATACG AACAAGGAGAAATCCATATAATCAGTAAGAGTGAGCCACAGCTGCTTCACCAATTTTCAGCTCATTTTATTAGCAACACT GATCAACCACAAGCCTGCAATTTTGCTTCTTTTCTTCCTTCCGAAGAGGACACTCCCCTCCAGCGGGCTGAATGGATCAA ATACTTGGGAGTTTTTTCAAACCTTGAGGTCAGAGCCAATGCAGTCTATGACGCGGTTAAAGAGAATTATATGTGCTTGA CTAAAGTTGCTGCAAACAAGAGTGCCGCAGCATCATTCAAGCCAATAGTTGCATGGATGAATTATAACGATGGTGTCTGG TCTTTTACAAAGGACACATACAAGCTAAAGTATGTGGAAGATGCAGGTGGGGAGAATGTGGATGCCTCCATCAACAAAAT TACCTATAACATTTCTAATCCTGATGATTTGGACGAACTGCATGCCATATTATGTTCAACTGTGGATGTGGTGATTGATG AAAGTTACACTTCTGATCCTGTGGGCTACAATGTCTCCACCTTCCTCCAAACTATAAATGTTGAAGAGTACTCTTGTTTC ACTTTTCTCACAAACAAAAGCTTATGGAGATACGATAAAAGAATCCAAAACTCAACCACTATAGACTGGTTTGATGGAGC CATTTCGCAGCCTCAACTAGTTTTAGCAGATCTAGTTGAAGCTTTGTTTCCAACAGGAAGTTATACAACAACATACCTGA GGAATCTTGCAAAGGAAGAAGGTGTCATTAATATCAAATCTGAGATGTGTGACAGAGATAGTTCCACTGCTATGGAACCC ACAATTCTAGCTTGCCAATTATAA |