
Microexon ID | Ta_4B:643287105-643287118:- |
Species | Triticum Aestivum | Coordinates | 4B:643287105..643287118 |
Microexon Cluster ID | MEP40 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | SBP_bac_10 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GTYATCCCMYTRKCMAACTWYTCHRTBGAYRCCRMTTATTTTCCAGTKTCMTTCTTYGAGCTTYTAGGWYTRCTRGVRARCWTGAARGGCATMACATCAGAMWMRGTR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGTCCTTCTTTGAG |
Microexon Amino Acid seq | VSFFE |
Microexon-tag DNA Seq | GTCGTCCCCCTCGCCAACTACTCCCTCGACACCACCGCCTCTCCAGTGTCCTTCTTTGAGCTACTTGGGGTGCTGGAGAACCTGAAGGGGGTAACATCACCTCAGGTG |
Microexon-tag Amino Acid Seq | VVPLANYSLDTTASPVSFFELLGVLENLKGVTSPQV |
Microexon-tag spanning region | 643286804-643287235 |
Microexon-tag prediction score | 0.9268 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS4B02G350500.1x |
Reference Transcript ID | TraesCS4B02G350500.1 |
Gene ID | TraesCS4B02G350500 |
Gene Name | NA |
Transcript ID | TraesCS4B02G350500.1 |
Protein ID | |
Gene ID | TraesCS4B02G350500 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >TraesCS4B02G350500.1 MACRRSAALLWAALLLHLAAAAEAASKPPAVVGGPVSRAEDARLFHIYYGQGFKVIKNAWDGNSYLLMQSTSKMASRTRY CTGRIKSFVVPLANYSLDTTASPVSFFELLGVLENLKGVTSPQVASQCVLQAYASGNVQLVNGTDAGKLSQFCAHFVSTD QDKGCNFAAYVPSEEDTPLQRAEWIKYLGTFTNSEDRANAVYDAIKTNYLCLSKAAAALSTRFKPVVAWVEFTEGVWTFV RESYKLQYVKDAGAEIVDATITDKRFNGSDPEDMDSLHAILCTVDVVIDQTYASDPAEYKLSTFLDNIDVGRDSCFSFIT NQSIWRFDKRIGNSKTLDWSDGAISQPQLVLADLIEVFFPTGNYTTVYFRNLAKEEGVTEIGPEMCTRSISTPMEPTILP CQ* |
CDS seq | >TraesCS4B02G350500.1 ATGGCGTGCCGCCGGAGCGCGGCGCTGCTGTGGGCGGCTCTGCTCCTGCACTTGGCCGCCGCCGCCGAGGCGGCGAGCAA GCCGCCGGCGGTGGTGGGCGGGCCGGTGTCGCGGGCGGAGGACGCGCGGCTGTTCCACATATACTACGGACAGGGCTTCA AGGTGATCAAGAACGCCTGGGACGGCAACAGCTACCTCCTCATGCAGAGCACGTCCAAGATGGCGAGCAGGACGAGGTAC TGCACGGGGAGGATCAAGTCCTTCGTCGTCCCCCTCGCCAACTACTCCCTCGACACCACCGCCTCTCCAGTGTCCTTCTT TGAGCTACTTGGGGTGCTGGAGAACCTGAAGGGGGTAACATCACCTCAGGTGGCCTCTCAGTGCGTGCTCCAGGCATATG CAAGTGGAAATGTTCAGCTTGTCAACGGGACAGACGCAGGCAAACTCTCGCAGTTCTGCGCGCATTTCGTGAGCACGGAT CAAGATAAAGGTTGCAACTTCGCAGCCTACGTGCCCTCCGAAGAGGACACGCCGTTGCAGAGGGCCGAGTGGATCAAATA CCTGGGAACGTTCACCAACTCCGAAGACAGGGCCAATGCAGTATATGATGCAATTAAGACAAACTATCTGTGCCTAAGCA AAGCAGCAGCTGCCCTAAGCACCCGATTCAAGCCTGTAGTGGCATGGGTCGAATTCACAGAGGGAGTGTGGACATTTGTC AGAGAAAGCTACAAGTTACAGTATGTCAAAGATGCAGGAGCAGAGATTGTTGATGCAACTATTACCGATAAGCGATTCAA CGGTTCCGATCCAGAGGACATGGACAGCTTACATGCCATCCTTTGTACGGTGGATGTGGTCATAGATCAGACATACGCCT CGGATCCTGCAGAGTACAAGCTGTCCACATTTTTGGACAATATTGATGTGGGCCGTGACTCTTGTTTTAGTTTCATAACG AACCAAAGCATATGGAGATTTGATAAAAGAATAGGAAATTCAAAGACACTTGATTGGTCAGATGGAGCTATCTCCCAGCC CCAGTTGGTTCTTGCTGATCTAATAGAAGTTTTCTTCCCAACGGGGAACTACACAACAGTTTACTTCAGGAACCTTGCAA AGGAAGAAGGGGTCACAGAAATTGGCCCTGAAATGTGCACTAGGAGCATATCCACGCCCATGGAGCCTACGATCCTGCCC TGCCAATGA |
Ta_4B:643287105-643287118:- does not have available information here.