Microexon ID Ta_4B:643287105-643287118:-
Species Triticum   Aestivum
Coordinates 4B:643287105..643287118
Microexon Cluster ID MEP40
Size 14
Phase 1
Pfam Domain Motif SBP_bac_10
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,14,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GTYATCCCMYTRKCMAACTWYTCHRTBGAYRCCRMTTATTTTCCAGTKTCMTTCTTYGAGCTTYTAGGWYTRCTRGVRARCWTGAARGGCATMACATCAGAMWMRGTR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TGTCCTTCTTTGAG
Microexon Amino Acid seq VSFFE
Microexon-tag DNA Seq GTCGTCCCCCTCGCCAACTACTCCCTCGACACCACCGCCTCTCCAGTGTCCTTCTTTGAGCTACTTGGGGTGCTGGAGAACCTGAAGGGGGTAACATCACCTCAGGTG
Microexon-tag Amino Acid Seq VVPLANYSLDTTASPVSFFELLGVLENLKGVTSPQV
Microexon-tag spanning region643286804-643287235
Microexon-tag prediction score0.9268
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS4B02G350500.1x
Reference Transcript ID TraesCS4B02G350500.1
Gene ID TraesCS4B02G350500
Gene Name NA
Transcript ID TraesCS4B02G350500.1
Protein ID
Gene ID TraesCS4B02G350500
Gene Name
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >TraesCS4B02G350500.1
MACRRSAALLWAALLLHLAAAAEAASKPPAVVGGPVSRAEDARLFHIYYGQGFKVIKNAWDGNSYLLMQSTSKMASRTRY
CTGRIKSFVVPLANYSLDTTASPVSFFELLGVLENLKGVTSPQVASQCVLQAYASGNVQLVNGTDAGKLSQFCAHFVSTD
QDKGCNFAAYVPSEEDTPLQRAEWIKYLGTFTNSEDRANAVYDAIKTNYLCLSKAAAALSTRFKPVVAWVEFTEGVWTFV
RESYKLQYVKDAGAEIVDATITDKRFNGSDPEDMDSLHAILCTVDVVIDQTYASDPAEYKLSTFLDNIDVGRDSCFSFIT
NQSIWRFDKRIGNSKTLDWSDGAISQPQLVLADLIEVFFPTGNYTTVYFRNLAKEEGVTEIGPEMCTRSISTPMEPTILP
CQ*
CDS seq >TraesCS4B02G350500.1
ATGGCGTGCCGCCGGAGCGCGGCGCTGCTGTGGGCGGCTCTGCTCCTGCACTTGGCCGCCGCCGCCGAGGCGGCGAGCAA
GCCGCCGGCGGTGGTGGGCGGGCCGGTGTCGCGGGCGGAGGACGCGCGGCTGTTCCACATATACTACGGACAGGGCTTCA
AGGTGATCAAGAACGCCTGGGACGGCAACAGCTACCTCCTCATGCAGAGCACGTCCAAGATGGCGAGCAGGACGAGGTAC
TGCACGGGGAGGATCAAGTCCTTCGTCGTCCCCCTCGCCAACTACTCCCTCGACACCACCGCCTCTCCAGTGTCCTTCTT
TGAGCTACTTGGGGTGCTGGAGAACCTGAAGGGGGTAACATCACCTCAGGTGGCCTCTCAGTGCGTGCTCCAGGCATATG
CAAGTGGAAATGTTCAGCTTGTCAACGGGACAGACGCAGGCAAACTCTCGCAGTTCTGCGCGCATTTCGTGAGCACGGAT
CAAGATAAAGGTTGCAACTTCGCAGCCTACGTGCCCTCCGAAGAGGACACGCCGTTGCAGAGGGCCGAGTGGATCAAATA
CCTGGGAACGTTCACCAACTCCGAAGACAGGGCCAATGCAGTATATGATGCAATTAAGACAAACTATCTGTGCCTAAGCA
AAGCAGCAGCTGCCCTAAGCACCCGATTCAAGCCTGTAGTGGCATGGGTCGAATTCACAGAGGGAGTGTGGACATTTGTC
AGAGAAAGCTACAAGTTACAGTATGTCAAAGATGCAGGAGCAGAGATTGTTGATGCAACTATTACCGATAAGCGATTCAA
CGGTTCCGATCCAGAGGACATGGACAGCTTACATGCCATCCTTTGTACGGTGGATGTGGTCATAGATCAGACATACGCCT
CGGATCCTGCAGAGTACAAGCTGTCCACATTTTTGGACAATATTGATGTGGGCCGTGACTCTTGTTTTAGTTTCATAACG
AACCAAAGCATATGGAGATTTGATAAAAGAATAGGAAATTCAAAGACACTTGATTGGTCAGATGGAGCTATCTCCCAGCC
CCAGTTGGTTCTTGCTGATCTAATAGAAGTTTTCTTCCCAACGGGGAACTACACAACAGTTTACTTCAGGAACCTTGCAA
AGGAAGAAGGGGTCACAGAAATTGGCCCTGAAATGTGCACTAGGAGCATATCCACGCCCATGGAGCCTACGATCCTGCCC
TGCCAATGA
Ta_4B:643287105-643287118:- does not have available information here.