Microexon ID Sb_1:79289518-79289531:-
Species Sorghum   Bicolor
Coordinates 1:79289518..79289531
Microexon Cluster ID MEP40
Size 14
Phase 1
Pfam Domain Motif SBP_bac_10
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,14,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GTYATCCCMYTRKCMAACTWYTCHRTBGAYRCCRMTTATTTTCCAGTKTCMTTCTTYGAGCTTYTAGGWYTRCTRGVRARCWTGAARGGCATMACATCAGAMWMRGTR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TGTCATTCTTTGAG
Microexon Amino Acid seq VSFFE
Microexon-tag DNA Seq GTCATCCCCCTTGCCAACTTCTCCATCGACACCACGACTTCTCCAGTGTCATTCTTTGAGCTGCTTGGAGTGATAGAAAGCTTGAAAGGAATAACATCAAACCAAGTT
Microexon-tag Amino Acid Seq VIPLANFSIDTTTSPVSFFELLGVIESLKGITSNQV
Microexon-tag spanning region79289170-79289979
Microexon-tag prediction score0.9501
Overlapped with the annotated transcript (%) 100
New Transcript ID EER95619x
Reference Transcript ID EER95619
Gene ID SORBI_3001G528900
Gene Name NA
Transcript ID EER95619
Protein ID
Gene ID SORBI_3001G528900
Gene Name
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >EER95619
MTAARSRRCLQAAVLLWAALSPWALALAAAAVPAKLKAAPAPVATGPMSKVEDATMFRIYYGQSFKVIKNSGDGKSYLLM
QNTSKMASKTRYCTGRIKSFVIPLANFSIDTTTSPVSFFELLGVIESLKGITSNQVASQCVLQSYTSGNAQLVNRTDAQT
LSQFTAHFISDTDEDRGCNFAAYVPLEEDAPLQRAEWIKYLGTFTNSEGRANTVYDAIKTNYLCLSKAAANLSTRFKPIV
AWIEFTQGMWTFVKESYTLQYVTDAGAETVDATITNKRFNSSDPEDMDNFHAILCVSINHSESNITTL*
CDS seq >EER95619
ATGACCGCTGCTCGTAGCCGCCGCTGCCTGCAGGCGGCGGTGCTGCTCTGGGCGGCGCTCTCGCCGTGGGCGCTCGCTTT
AGCGGCCGCAGCCGTGCCGGCAAAGCTCAAGGCCGCGCCAGCGCCTGTGGCGACCGGGCCGATGTCCAAGGTGGAGGACG
CCACCATGTTTCGGATATACTACGGCCAGAGCTTCAAGGTCATCAAGAACTCCGGCGACGGCAAGAGCTACCTTCTCATG
CAGAACACGTCCAAGATGGCATCCAAGACGAGGTATTGCACGGGAAGGATCAAGTCGTTCGTCATCCCCCTTGCCAACTT
CTCCATCGACACCACGACTTCTCCAGTGTCATTCTTTGAGCTGCTTGGAGTGATAGAAAGCTTGAAAGGAATAACATCAA
ACCAAGTTGCTTCTCAGTGTGTGCTCCAATCATATACAAGTGGAAATGCCCAGCTTGTGAATAGAACTGATGCACAGACA
CTCTCGCAGTTTACTGCACATTTCATAAGCGATACAGATGAAGATAGAGGTTGCAACTTCGCAGCATATGTACCCTTAGA
AGAAGATGCACCATTGCAGAGGGCTGAGTGGATCAAGTACTTGGGAACTTTCACAAACTCTGAAGGCAGGGCTAATACTG
TCTATGATGCAATAAAGACAAACTACCTGTGCTTAAGCAAAGCAGCTGCAAACCTTAGCACAAGGTTCAAGCCTATAGTA
GCGTGGATTGAATTCACACAGGGAATGTGGACATTTGTTAAAGAAAGTTACACCTTACAGTATGTCACAGATGCAGGAGC
AGAAACTGTTGATGCAACTATTACAAATAAGAGATTTAATAGTTCAGACCCAGAGGATATGGACAACTTCCATGCTATTC
TTTGTGTGAGTATCAACCATTCAGAATCTAATATTACAACCCTGTAA
Sb_1:79289518-79289531:- does not have available information here.