
Microexon ID | Sb_1:79289518-79289531:- |
Species | Sorghum Bicolor | Coordinates | 1:79289518..79289531 |
Microexon Cluster ID | MEP40 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | SBP_bac_10 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GTYATCCCMYTRKCMAACTWYTCHRTBGAYRCCRMTTATTTTCCAGTKTCMTTCTTYGAGCTTYTAGGWYTRCTRGVRARCWTGAARGGCATMACATCAGAMWMRGTR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGTCATTCTTTGAG |
Microexon Amino Acid seq | VSFFE |
Microexon-tag DNA Seq | GTCATCCCCCTTGCCAACTTCTCCATCGACACCACGACTTCTCCAGTGTCATTCTTTGAGCTGCTTGGAGTGATAGAAAGCTTGAAAGGAATAACATCAAACCAAGTT |
Microexon-tag Amino Acid Seq | VIPLANFSIDTTTSPVSFFELLGVIESLKGITSNQV |
Microexon-tag spanning region | 79289170-79289979 |
Microexon-tag prediction score | 0.9501 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | EER95619x |
Reference Transcript ID | EER95619 |
Gene ID | SORBI_3001G528900 |
Gene Name | NA |
Transcript ID | EER95619 |
Protein ID | |
Gene ID | SORBI_3001G528900 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >EER95619 MTAARSRRCLQAAVLLWAALSPWALALAAAAVPAKLKAAPAPVATGPMSKVEDATMFRIYYGQSFKVIKNSGDGKSYLLM QNTSKMASKTRYCTGRIKSFVIPLANFSIDTTTSPVSFFELLGVIESLKGITSNQVASQCVLQSYTSGNAQLVNRTDAQT LSQFTAHFISDTDEDRGCNFAAYVPLEEDAPLQRAEWIKYLGTFTNSEGRANTVYDAIKTNYLCLSKAAANLSTRFKPIV AWIEFTQGMWTFVKESYTLQYVTDAGAETVDATITNKRFNSSDPEDMDNFHAILCVSINHSESNITTL* |
CDS seq | >EER95619 ATGACCGCTGCTCGTAGCCGCCGCTGCCTGCAGGCGGCGGTGCTGCTCTGGGCGGCGCTCTCGCCGTGGGCGCTCGCTTT AGCGGCCGCAGCCGTGCCGGCAAAGCTCAAGGCCGCGCCAGCGCCTGTGGCGACCGGGCCGATGTCCAAGGTGGAGGACG CCACCATGTTTCGGATATACTACGGCCAGAGCTTCAAGGTCATCAAGAACTCCGGCGACGGCAAGAGCTACCTTCTCATG CAGAACACGTCCAAGATGGCATCCAAGACGAGGTATTGCACGGGAAGGATCAAGTCGTTCGTCATCCCCCTTGCCAACTT CTCCATCGACACCACGACTTCTCCAGTGTCATTCTTTGAGCTGCTTGGAGTGATAGAAAGCTTGAAAGGAATAACATCAA ACCAAGTTGCTTCTCAGTGTGTGCTCCAATCATATACAAGTGGAAATGCCCAGCTTGTGAATAGAACTGATGCACAGACA CTCTCGCAGTTTACTGCACATTTCATAAGCGATACAGATGAAGATAGAGGTTGCAACTTCGCAGCATATGTACCCTTAGA AGAAGATGCACCATTGCAGAGGGCTGAGTGGATCAAGTACTTGGGAACTTTCACAAACTCTGAAGGCAGGGCTAATACTG TCTATGATGCAATAAAGACAAACTACCTGTGCTTAAGCAAAGCAGCTGCAAACCTTAGCACAAGGTTCAAGCCTATAGTA GCGTGGATTGAATTCACACAGGGAATGTGGACATTTGTTAAAGAAAGTTACACCTTACAGTATGTCACAGATGCAGGAGC AGAAACTGTTGATGCAACTATTACAAATAAGAGATTTAATAGTTCAGACCCAGAGGATATGGACAACTTCCATGCTATTC TTTGTGTGAGTATCAACCATTCAGAATCTAATATTACAACCCTGTAA |
Sb_1:79289518-79289531:- does not have available information here.