Microexon ID Ps_NC_039364.1:123153596-123153609:-
Species Papaver somniferum
Coordinates NC_039364.1:123153596..123153609
Microexon Cluster ID MEP40
Size 14
Phase 1
Pfam Domain Motif SBP_bac_10
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,14,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GTYATCCCMYTRKCMAACTWYTCHRTBGAYRCCRMTTATTTTCCAGTKTCMTTCTTYGAGCTTYTAGGWYTRCTRGVRARCWTGAARGGCATMACATCAGAMWMRGTR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TGTCCTTCTTTGAG
Microexon Amino Acid seq VSFFE
Microexon-tag DNA Seq GTAGTACCCCTATCAAACTACTCTATCAACACAGACTACTTTCCAGTGTCCTTCTTTGAGCTTCTAGGATTGGGGGGAAGTTTGAAGGGAATTACATCAGATTTAGTT
Microexon-tag Amino Acid Seq VVPLSNYSINTDYFPVSFFELLGLGGSLKGITSDLV
Microexon-tag spanning region123153473-123153938
Microexon-tag prediction score0.9357
Overlapped with the annotated transcript (%) 100
New Transcript ID XM_026547025.1x
Reference Transcript ID XM_026547025.1
Gene ID NA
Gene Name NA
Transcript ID XM_026547025.1
Protein ID XP_026402810.1
Gene ID LOC113298318
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >XP_026402810.1
MSSDTGAYINSLQLLFSLWCFTNGVLYSIFLCGSCIRVVNAAAKSVNVGSNVSVVQDAKYFHIYYGQNFKVIKNGIDGKN
YLLIQNNSRMATRTKYCTGRIKSFVVPLSNYSINTDYFPVSFFELLGLGGSLKGITSDLVASECVLKSYMDGGIQMINKT
DVVKDTTQFTAYFVTNPDKMEACNFATFLPVDEDTPLQRAEWIKYLGAFANLEDRANHVYEAVKTNYMCLTKAAENNRKA
FKPVVAWLRFNEGVWSFTNDAYKMKYVLDAGGENIDDSMNKNTYDTSIPDDMDDFHAILCTVDVVIDETYTSHPVEYKLS
TFLKNLKVNEDEAQSDGFGFLTKQSLWRYDKRIQNSDSLDWLNNAVSQPHLVLADLLEAFFPTGNYTTTYLRNLAKDEKV
TTIDPQMCSREISTAMEPIKVPC*
CDS seq >XM_026547025.1
ATGTCTTCTGATACGGGAGCTTACATTAATTCTCTTCAGTTACTCTTTAGCCTCTGGTGCTTTACTAATGGCGTTCTCTA
TTCGATTTTCTTGTGTGGGAGTTGTATAAGGGTTGTGAATGCAGCAGCAAAATCTGTAAATGTTGGAAGTAATGTTTCAG
TGGTTCAAGATGCGAAGTACTTCCATATATATTATGGTCAGAACTTCAAAGTTATCAAAAATGGTATTGATGGCAAGAAT
TACCTTCTCATTCAGAATAATTCGAGAATGGCGACGAGAACAAAATATTGCACAGGAAGAATCAAATCATTTGTAGTACC
CCTATCAAACTACTCTATCAACACAGACTACTTTCCAGTGTCCTTCTTTGAGCTTCTAGGATTGGGGGGAAGTTTGAAGG
GAATTACATCAGATTTAGTTGCCTCGGAATGTGTCTTGAAATCGTACATGGATGGTGGTATCCAAATGATCAACAAAACT
GATGTAGTGAAAGATACTACTCAATTCACTGCTTATTTTGTTACCAACCCGGATAAAATGGAAGCTTGTAATTTTGCTAC
CTTCCTTCCGGTCGACGAGGATACTCCTCTCCAGCGAGCAGAATGGATCAAGTACTTGGGTGCTTTCGCGAATTTGGAAG
ATAGAGCAAATCACGTATACGAGGCAGTGAAAACAAATTACATGTGTTTGACAAAAGCGGCAGAGAATAACAGAAAAGCA
TTCAAACCTGTGGTAGCATGGCTAAGGTTTAATGAGGGAGTTTGGTCTTTCACCAATGATGCATACAAGATGAAGTATGT
GTTAGATGCAGGTGGGGAAAACATTGACGACTCGATGAACAAAAATACCTATGACACTTCAATCCCGGATGACATGGACG
ACTTCCATGCTATCCTATGTACTGTTGACGTTGTCATTGATGAAACTTACACTTCACACCCTGTCGAATACAAGCTTTCC
ACATTCTTGAAAAACTTAAAAGTGAATGAAGATGAAGCACAGTCTGATGGTTTTGGCTTCCTTACGAAACAAAGCTTATG
GAGATATGATAAAAGGATCCAAAATTCCGATTCTCTAGATTGGTTAAACAATGCTGTCTCTCAGCCTCATCTTGTTCTGG
CAGATTTATTAGAGGCATTTTTTCCTACGGGAAATTACACGACAACTTACTTAAGAAACCTTGCGAAGGATGAAAAAGTT
ACTACCATTGATCCTCAGATGTGCAGTAGAGAGATTTCCACAGCAATGGAACCCATCAAGGTTCCTTGTTAG
Microexon DNA seq TGTCCTTCTTTGAG
Microexon Amino Acid seq VSFFE
Microexon-tag DNA Seq GTAGTACCCCTATCAAACTACTCTATCAACACAGACTACTTTCCAGTGTCCTTCTTTGAGCTTCTAGGATTGGGGGGAAGTTTGAAGGGAATTACATCAGATTTAGTT
Microexon-tag Amino Acid seq VVPLSNYSINTDYFPVSFFELLGLGGSLKGITSDLV
Transcript ID XM_026547025.1
Gene ID Ps.43553
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >XM_026547025.1
MSSDTGAYINSLQLLFSLWCFTNGVLYSIFLCGSCIRVVNAAAKSVNVGSNVSVVQDAKYFHIYYGQNFKVIKNGIDGKN
YLLIQNNSRMATRTKYCTGRIKSFVVPLSNYSINTDYFPVSFFELLGLGGSLKGITSDLVASECVLKSYMDGGIQMINKT
DVVKDTTQFTAYFVTNPDKMEACNFATFLPVDEDTPLQRAEWIKYLGAFANLEDRANHVYEAVKTNYMCLTKAAENNRKA
FKPVVAWLRFNEGVWSFTNDAYKMKYVLDAGGENIDDSMNKNTYDTSIPDDMDDFHAILCTVDVVIDETYTSHPVEYKLS
TFLKNLKVNEDEAQSDGFGFLTKQSLWRYDKRIQNSDSLDWLNNAVSQPHLVLADLLEAFFPTGNYTTTYLRNLAKDEKV
TTIDPQMCSREISTAMEPIKVPC*
CDS seq >XM_026547025.1
ATGTCTTCTGATACGGGAGCTTACATTAATTCTCTTCAGTTACTCTTTAGCCTCTGGTGCTTTACTAATGGCGTTCTCTA
TTCGATTTTCTTGTGTGGGAGTTGTATAAGGGTTGTGAATGCAGCAGCAAAATCTGTAAATGTTGGAAGTAATGTTTCAG
TGGTTCAAGATGCGAAGTACTTCCATATATATTATGGTCAGAACTTCAAAGTTATCAAAAATGGTATTGATGGCAAGAAT
TACCTTCTCATTCAGAATAATTCGAGAATGGCGACGAGAACAAAATATTGCACAGGAAGAATCAAATCATTTGTAGTACC
CCTATCAAACTACTCTATCAACACAGACTACTTTCCAGTGTCCTTCTTTGAGCTTCTAGGATTGGGGGGAAGTTTGAAGG
GAATTACATCAGATTTAGTTGCCTCGGAATGTGTCTTGAAATCGTACATGGATGGTGGTATCCAAATGATCAACAAAACT
GATGTAGTGAAAGATACTACTCAATTCACTGCTTATTTTGTTACCAACCCGGATAAAATGGAAGCTTGTAATTTTGCTAC
CTTCCTTCCGGTCGACGAGGATACTCCTCTCCAGCGAGCAGAATGGATCAAGTACTTGGGTGCTTTCGCGAATTTGGAAG
ATAGAGCAAATCACGTATACGAGGCAGTGAAAACAAATTACATGTGTTTGACAAAAGCGGCAGAGAATAACAGAAAAGCA
TTCAAACCTGTGGTAGCATGGCTAAGGTTTAATGAGGGAGTTTGGTCTTTCACCAATGATGCATACAAGATGAAGTATGT
GTTAGATGCAGGTGGGGAAAACATTGACGACTCGATGAACAAAAATACCTATGACACTTCAATCCCGGATGACATGGACG
ACTTCCATGCTATCCTATGTACTGTTGACGTTGTCATTGATGAAACTTACACTTCACACCCTGTCGAATACAAGCTTTCC
ACATTCTTGAAAAACTTAAAAGTGAATGAAGATGAAGCACAGTCTGATGGTTTTGGCTTCCTTACGAAACAAAGCTTATG
GAGATATGATAAAAGGATCCAAAATTCCGATTCTCTAGATTGGTTAAACAATGCTGTCTCTCAGCCTCATCTTGTTCTGG
CAGATTTATTAGAGGCATTTTTTCCTACGGGAAATTACACGACAACTTACTTAAGAAACCTTGCGAAGGATGAAAAAGTT
ACTACCATTGATCCTCAGATGTGCAGTAGAGAGATTTCCACAGCAATGGAACCCATCAAGGTTCCTTGTTAG