
Microexon ID | Ps_NC_039364.1:123153596-123153609:- |
Species | Papaver somniferum | Coordinates | NC_039364.1:123153596..123153609 |
Microexon Cluster ID | MEP40 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | SBP_bac_10 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GTYATCCCMYTRKCMAACTWYTCHRTBGAYRCCRMTTATTTTCCAGTKTCMTTCTTYGAGCTTYTAGGWYTRCTRGVRARCWTGAARGGCATMACATCAGAMWMRGTR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGTCCTTCTTTGAG |
Microexon Amino Acid seq | VSFFE |
Microexon-tag DNA Seq | GTAGTACCCCTATCAAACTACTCTATCAACACAGACTACTTTCCAGTGTCCTTCTTTGAGCTTCTAGGATTGGGGGGAAGTTTGAAGGGAATTACATCAGATTTAGTT |
Microexon-tag Amino Acid Seq | VVPLSNYSINTDYFPVSFFELLGLGGSLKGITSDLV |
Microexon-tag spanning region | 123153473-123153938 |
Microexon-tag prediction score | 0.9357 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026547025.1x |
Reference Transcript ID | XM_026547025.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026547025.1 |
Protein ID | XP_026402810.1 |
Gene ID | LOC113298318 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >XP_026402810.1 MSSDTGAYINSLQLLFSLWCFTNGVLYSIFLCGSCIRVVNAAAKSVNVGSNVSVVQDAKYFHIYYGQNFKVIKNGIDGKN YLLIQNNSRMATRTKYCTGRIKSFVVPLSNYSINTDYFPVSFFELLGLGGSLKGITSDLVASECVLKSYMDGGIQMINKT DVVKDTTQFTAYFVTNPDKMEACNFATFLPVDEDTPLQRAEWIKYLGAFANLEDRANHVYEAVKTNYMCLTKAAENNRKA FKPVVAWLRFNEGVWSFTNDAYKMKYVLDAGGENIDDSMNKNTYDTSIPDDMDDFHAILCTVDVVIDETYTSHPVEYKLS TFLKNLKVNEDEAQSDGFGFLTKQSLWRYDKRIQNSDSLDWLNNAVSQPHLVLADLLEAFFPTGNYTTTYLRNLAKDEKV TTIDPQMCSREISTAMEPIKVPC* |
CDS seq | >XM_026547025.1 ATGTCTTCTGATACGGGAGCTTACATTAATTCTCTTCAGTTACTCTTTAGCCTCTGGTGCTTTACTAATGGCGTTCTCTA TTCGATTTTCTTGTGTGGGAGTTGTATAAGGGTTGTGAATGCAGCAGCAAAATCTGTAAATGTTGGAAGTAATGTTTCAG TGGTTCAAGATGCGAAGTACTTCCATATATATTATGGTCAGAACTTCAAAGTTATCAAAAATGGTATTGATGGCAAGAAT TACCTTCTCATTCAGAATAATTCGAGAATGGCGACGAGAACAAAATATTGCACAGGAAGAATCAAATCATTTGTAGTACC CCTATCAAACTACTCTATCAACACAGACTACTTTCCAGTGTCCTTCTTTGAGCTTCTAGGATTGGGGGGAAGTTTGAAGG GAATTACATCAGATTTAGTTGCCTCGGAATGTGTCTTGAAATCGTACATGGATGGTGGTATCCAAATGATCAACAAAACT GATGTAGTGAAAGATACTACTCAATTCACTGCTTATTTTGTTACCAACCCGGATAAAATGGAAGCTTGTAATTTTGCTAC CTTCCTTCCGGTCGACGAGGATACTCCTCTCCAGCGAGCAGAATGGATCAAGTACTTGGGTGCTTTCGCGAATTTGGAAG ATAGAGCAAATCACGTATACGAGGCAGTGAAAACAAATTACATGTGTTTGACAAAAGCGGCAGAGAATAACAGAAAAGCA TTCAAACCTGTGGTAGCATGGCTAAGGTTTAATGAGGGAGTTTGGTCTTTCACCAATGATGCATACAAGATGAAGTATGT GTTAGATGCAGGTGGGGAAAACATTGACGACTCGATGAACAAAAATACCTATGACACTTCAATCCCGGATGACATGGACG ACTTCCATGCTATCCTATGTACTGTTGACGTTGTCATTGATGAAACTTACACTTCACACCCTGTCGAATACAAGCTTTCC ACATTCTTGAAAAACTTAAAAGTGAATGAAGATGAAGCACAGTCTGATGGTTTTGGCTTCCTTACGAAACAAAGCTTATG GAGATATGATAAAAGGATCCAAAATTCCGATTCTCTAGATTGGTTAAACAATGCTGTCTCTCAGCCTCATCTTGTTCTGG CAGATTTATTAGAGGCATTTTTTCCTACGGGAAATTACACGACAACTTACTTAAGAAACCTTGCGAAGGATGAAAAAGTT ACTACCATTGATCCTCAGATGTGCAGTAGAGAGATTTCCACAGCAATGGAACCCATCAAGGTTCCTTGTTAG |
Microexon DNA seq | TGTCCTTCTTTGAG |
Microexon Amino Acid seq | VSFFE |
Microexon-tag DNA Seq | GTAGTACCCCTATCAAACTACTCTATCAACACAGACTACTTTCCAGTGTCCTTCTTTGAGCTTCTAGGATTGGGGGGAAGTTTGAAGGGAATTACATCAGATTTAGTT |
Microexon-tag Amino Acid seq | VVPLSNYSINTDYFPVSFFELLGLGGSLKGITSDLV |
Transcript ID | XM_026547025.1 |
Gene ID | Ps.43553 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >XM_026547025.1 MSSDTGAYINSLQLLFSLWCFTNGVLYSIFLCGSCIRVVNAAAKSVNVGSNVSVVQDAKYFHIYYGQNFKVIKNGIDGKN YLLIQNNSRMATRTKYCTGRIKSFVVPLSNYSINTDYFPVSFFELLGLGGSLKGITSDLVASECVLKSYMDGGIQMINKT DVVKDTTQFTAYFVTNPDKMEACNFATFLPVDEDTPLQRAEWIKYLGAFANLEDRANHVYEAVKTNYMCLTKAAENNRKA FKPVVAWLRFNEGVWSFTNDAYKMKYVLDAGGENIDDSMNKNTYDTSIPDDMDDFHAILCTVDVVIDETYTSHPVEYKLS TFLKNLKVNEDEAQSDGFGFLTKQSLWRYDKRIQNSDSLDWLNNAVSQPHLVLADLLEAFFPTGNYTTTYLRNLAKDEKV TTIDPQMCSREISTAMEPIKVPC* |
CDS seq | >XM_026547025.1 ATGTCTTCTGATACGGGAGCTTACATTAATTCTCTTCAGTTACTCTTTAGCCTCTGGTGCTTTACTAATGGCGTTCTCTA TTCGATTTTCTTGTGTGGGAGTTGTATAAGGGTTGTGAATGCAGCAGCAAAATCTGTAAATGTTGGAAGTAATGTTTCAG TGGTTCAAGATGCGAAGTACTTCCATATATATTATGGTCAGAACTTCAAAGTTATCAAAAATGGTATTGATGGCAAGAAT TACCTTCTCATTCAGAATAATTCGAGAATGGCGACGAGAACAAAATATTGCACAGGAAGAATCAAATCATTTGTAGTACC CCTATCAAACTACTCTATCAACACAGACTACTTTCCAGTGTCCTTCTTTGAGCTTCTAGGATTGGGGGGAAGTTTGAAGG GAATTACATCAGATTTAGTTGCCTCGGAATGTGTCTTGAAATCGTACATGGATGGTGGTATCCAAATGATCAACAAAACT GATGTAGTGAAAGATACTACTCAATTCACTGCTTATTTTGTTACCAACCCGGATAAAATGGAAGCTTGTAATTTTGCTAC CTTCCTTCCGGTCGACGAGGATACTCCTCTCCAGCGAGCAGAATGGATCAAGTACTTGGGTGCTTTCGCGAATTTGGAAG ATAGAGCAAATCACGTATACGAGGCAGTGAAAACAAATTACATGTGTTTGACAAAAGCGGCAGAGAATAACAGAAAAGCA TTCAAACCTGTGGTAGCATGGCTAAGGTTTAATGAGGGAGTTTGGTCTTTCACCAATGATGCATACAAGATGAAGTATGT GTTAGATGCAGGTGGGGAAAACATTGACGACTCGATGAACAAAAATACCTATGACACTTCAATCCCGGATGACATGGACG ACTTCCATGCTATCCTATGTACTGTTGACGTTGTCATTGATGAAACTTACACTTCACACCCTGTCGAATACAAGCTTTCC ACATTCTTGAAAAACTTAAAAGTGAATGAAGATGAAGCACAGTCTGATGGTTTTGGCTTCCTTACGAAACAAAGCTTATG GAGATATGATAAAAGGATCCAAAATTCCGATTCTCTAGATTGGTTAAACAATGCTGTCTCTCAGCCTCATCTTGTTCTGG CAGATTTATTAGAGGCATTTTTTCCTACGGGAAATTACACGACAACTTACTTAAGAAACCTTGCGAAGGATGAAAAAGTT ACTACCATTGATCCTCAGATGTGCAGTAGAGAGATTTCCACAGCAATGGAACCCATCAAGGTTCCTTGTTAG |