
Microexon ID | Ha_14:114560011-114560024:- |
Species | Helianthus annuus | Coordinates | 14:114560011..114560024 |
Microexon Cluster ID | MEP40 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | SBP_bac_10 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GTYATCCCMYTRKCMAACTWYTCHRTBGAYRCCRMTTATTTTCCAGTKTCMTTCTTYGAGCTTYTAGGWYTRCTRGVRARCWTGAARGGCATMACATCAGAMWMRGTR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTCATTCTTTGAG |
Microexon Amino Acid seq | VSFFE |
Microexon-tag DNA Seq | GTCATTCCATTAGCAAACTTTTCCATGGATGTCAGTTATTTTCCAGTTTCATTCTTTGAGCTTCTAGGACTCATGCCATCATTGAAAGGCATCACATCAGAAAGGATA |
Microexon-tag Amino Acid Seq | VIPLANFSMDVSYFPVSFFELLGLMPSLKGITSERI |
Microexon-tag spanning region | 114559182-114560207 |
Microexon-tag prediction score | 0.9494 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OTF98235x |
Reference Transcript ID | OTF98235 |
Gene ID | HannXRQ_Chr14g0443391 |
Gene Name | NA |
Transcript ID | OTF98235 |
Protein ID | OTF98235 |
Gene ID | HannXRQ_Chr14g0443391 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >OTF98235 MLLLYMAVLSSAFSGLLLLNGGVMVEGVAVKVTGNISKIEDASYFRIYYGNTFKVIKNDLDGKSYLLIQSNSKMAAKTKY CTPRIKSFVIPLANFSMDVSYFPVSFFELLGLMPSLKGITSERIASPCLLKLYNEGQLQMLNKSEPQQFSQYTAHFISYN SNQQTQSCNYVAFVPIGEQTPLQRAEWIKYLGVFANVETRANEIYDAVKSNYMCLANSAASKKLKPIVAWMEFNDGVWTF TKEAYKLKYIEDAGGENLDESINKITYNITTIEDMEQLHAILCTVDVLIDGTLTPDPFGYNATLFLQNLNIEDQSCLAFL SHESVWRHDKRLSTDLALDWFDGAVSQPQLVLADLMEMLFPTGNYTTTYFRNLLKGEEATSLGLENCDRDTFTAMEPTII ACT* |
CDS seq | >OTF98235 ATGTTACTATTGTATATGGCGGTTTTATCGTCGGCTTTTAGCGGTCTTTTGCTTCTCAATGGCGGAGTAATGGTGGAGGG CGTCGCTGTAAAAGTGACCGGTAACATTTCGAAGATAGAAGACGCTAGTTATTTTCGTATATATTATGGTAATACCTTCA AAGTCATCAAAAACGACCTTGATGGCAAGAGCTATCTTCTCATCCAGAGTAACTCAAAGATGGCAGCAAAGACCAAATAT TGTACGCCAAGGATCAAATCATTTGTCATTCCATTAGCAAACTTTTCCATGGATGTCAGTTATTTTCCAGTTTCATTCTT TGAGCTTCTAGGACTCATGCCATCATTGAAAGGCATCACATCAGAAAGGATAGCTTCTCCATGTCTCCTTAAACTCTATA ATGAGGGACAACTCCAAATGCTTAACAAGAGTGAGCCACAACAATTTTCTCAGTATACCGCGCATTTCATCAGCTATAAC TCCAATCAACAAACTCAGTCATGCAACTATGTTGCTTTTGTCCCCATCGGCGAGCAAACTCCCCTCCAAAGGGCCGAGTG GATCAAGTACTTGGGAGTTTTTGCAAATGTGGAAACGAGAGCAAATGAAATCTATGATGCTGTGAAAAGCAATTACATGT GCTTGGCTAATTCTGCCGCAAGCAAAAAGCTCAAACCAATAGTGGCTTGGATGGAGTTTAATGATGGTGTTTGGACTTTC ACAAAAGAAGCATACAAGCTAAAGTATATAGAAGATGCAGGTGGAGAAAACCTGGATGAGTCCATAAACAAAATAACATA CAACATAACAACTATTGAAGATATGGAACAACTTCATGCTATCTTATGTACCGTAGATGTATTGATTGATGGAACGTTAA CCCCAGACCCGTTTGGCTACAATGCAACGTTGTTTCTTCAAAACCTCAATATAGAGGATCAATCTTGTTTAGCATTTCTT TCACATGAAAGCGTGTGGAGACACGATAAACGCCTTTCAACTGACCTGGCTCTTGATTGGTTCGATGGAGCTGTGTCGCA ACCGCAACTAGTCCTTGCGGACCTAATGGAAATGTTGTTTCCAACGGGGAATTATACGACTACTTACTTTAGAAACCTCC TAAAGGGCGAAGAGGCTACAAGCCTTGGTCTTGAAAACTGCGATCGCGATACTTTTACGGCCATGGAGCCAACTATAATA GCATGCACATAG |
Microexon DNA seq | TTTCATTCTTTGAG |
Microexon Amino Acid seq | VSFFE |
Microexon-tag DNA Seq | GTCATTCCATTAGCAAACTTTTCCATGGATGTCAGTTATTTTCCAGTTTCATTCTTTGAGCTTCTAGGACTCATGCCATCATTGAAAGGCATCACATCAGAAAGGATA |
Microexon-tag Amino Acid seq | VIPLANFSMDVSYFPVSFFELLGLMPSLKGITSERI |
Transcript ID | OTF98235 |
Gene ID | Ha.19979 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >OTF98235 MLLLYMAVLSSAFSGLLLLNGGVMVEGVAVKVTGNISKIEDASYFRIYYGNTFKVIKNDLDGKSYLLIQSNSKMAAKTKY CTPRIKSFVIPLANFSMDVSYFPVSFFELLGLMPSLKGITSERIASPCLLKLYNEGQLQMLNKSEPQQFSQYTAHFISYN SNQQTQSCNYVAFVPIGEQTPLQRAEWIKYLGVFANVETRANEIYDAVKSNYMCLANSAASKKLKPIVAWMEFNDGVWTF TKEAYKLKYIEDAGGENLDESINKITYNITTIEDMEQLHAILCTVDVLIDGTLTPDPFGYNATLFLQNLNIEDQSCLAFL SHESVWRHDKRLSTDLALDWFDGAVSQPQLVLADLMEMLFPTGNYTTTYFRNLLKGEEATSLGLENCDRDTFTAMEPTII ACT* |
CDS seq | >OTF98235 ATGTTACTATTGTATATGGCGGTTTTATCGTCGGCTTTTAGCGGTCTTTTGCTTCTCAATGGCGGAGTAATGGTGGAGGG CGTCGCTGTAAAAGTGACCGGTAACATTTCGAAGATAGAAGACGCTAGTTATTTTCGTATATATTATGGTAATACCTTCA AAGTCATCAAAAACGACCTTGATGGCAAGAGCTATCTTCTCATCCAGAGTAACTCAAAGATGGCAGCAAAGACCAAATAT TGTACGCCAAGGATCAAATCATTTGTCATTCCATTAGCAAACTTTTCCATGGATGTCAGTTATTTTCCAGTTTCATTCTT TGAGCTTCTAGGACTCATGCCATCATTGAAAGGCATCACATCAGAAAGGATAGCTTCTCCATGTCTCCTTAAACTCTATA ATGAGGGACAACTCCAAATGCTTAACAAGAGTGAGCCACAACAATTTTCTCAGTATACCGCGCATTTCATCAGCTATAAC TCCAATCAACAAACTCAGTCATGCAACTATGTTGCTTTTGTCCCCATCGGCGAGCAAACTCCCCTCCAAAGGGCCGAGTG GATCAAGTACTTGGGAGTTTTTGCAAATGTGGAAACGAGAGCAAATGAAATCTATGATGCTGTGAAAAGCAATTACATGT GCTTGGCTAATTCTGCCGCAAGCAAAAAGCTCAAACCAATAGTGGCTTGGATGGAGTTTAATGATGGTGTTTGGACTTTC ACAAAAGAAGCATACAAGCTAAAGTATATAGAAGATGCAGGTGGAGAAAACCTGGATGAGTCCATAAACAAAATAACATA CAACATAACAACTATTGAAGATATGGAACAACTTCATGCTATCTTATGTACCGTAGATGTATTGATTGATGGAACGTTAA CCCCAGACCCGTTTGGCTACAATGCAACGTTGTTTCTTCAAAACCTCAATATAGAGGATCAATCTTGTTTAGCATTTCTT TCACATGAAAGCGTGTGGAGACACGATAAACGCCTTTCAACTGACCTGGCTCTTGATTGGTTCGATGGAGCTGTGTCGCA ACCGCAACTAGTCCTTGCGGACCTAATGGAAATGTTGTTTCCAACGGGGAATTATACGACTACTTACTTTAGAAACCTCC TAAAGGGCGAAGAGGCTACAAGCCTTGGTCTTGAAAACTGCGATCGCGATACTTTTACGGCCATGGAGCCAACTATAATA GCATGCACATAG |