
Microexon ID | Gm_18:3757877-3757890:- |
Species | Glycine max | Coordinates | 18:3757877..3757890 |
Microexon Cluster ID | MEP40 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | SBP_bac_10 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GTYATCCCMYTRKCMAACTWYTCHRTBGAYRCCRMTTATTTTCCAGTKTCMTTCTTYGAGCTTYTAGGWYTRCTRGVRARCWTGAARGGCATMACATCAGAMWMRGTR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TCTCCTTCTTAGAG |
Microexon Amino Acid seq | VSFLE |
Microexon-tag DNA Seq | GTCATACCATTGTCAAACTATTCTGTCGATACAACTTATTTTCCGGTCTCCTTCTTAGAGCTTTTAGGTTTAGTGGAGAGCTTGAAAGGCATAACCTCAGACTATGTG |
Microexon-tag Amino Acid Seq | VIPLSNYSVDTTYFPVSFLELLGLVESLKGITSDYV |
Microexon-tag spanning region | 3757703-3758179 |
Microexon-tag prediction score | 0.9502 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRG98001x |
Reference Transcript ID | KRG98001 |
Gene ID | GLYMA_18G043800 |
Gene Name | NA |
Transcript ID | KRG98001 |
Protein ID | KRG98001 |
Gene ID | GLYMA_18G043800 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >KRG98001 MDSAPSCSWLQAFSFLALVWLFNCGCVHGATPAVKVGNFSKVEDAGNFHIYYGQTFKVIKNSADGQSYLLLQNNSRIASR TKYCTSRIKSFVIPLSNYSVDTTYFPVSFLELLGLVESLKGITSDYVASPCVLKLYEGGQIELFNNSDYQKLAEFSSYFL SDTDQQPACNFATFVPFIEDIPLQRAEWIKFMGAFANVEARANQVYTAVKANYLCLAKIATSRTTFKPTVAWMRYKNGLW SFTQEKYQLKYVQDAGGEILGANKNTYNVSDPDDLEEFHAILCTVEVVIDETLTSDPVNYTFSTFIQNLNVEDRSCFSFI SNTSLWRYDKRVYNSVALDWYNGAVSQPQLALADLIEVLFPTENYTTTYFRNIAKAEVPINIGLEMCDRDTSTAMEPTIV ACG* |
CDS seq | >KRG98001 ATGGATTCAGCTCCTTCTTGTTCTTGGCTACAAGCCTTCTCCTTCTTAGCATTGGTTTGGTTATTTAACTGTGGATGTGT CCATGGAGCCACCCCAGCAGTGAAAGTAGGTAACTTTTCAAAGGTGGAAGATGCTGGAAACTTCCATATTTACTATGGCC AGACCTTCAAAGTCATTAAGAATTCTGCTGATGGCCAGAGCTACCTTCTTCTCCAGAATAATTCAAGGATTGCATCAAGG ACTAAATATTGCACATCAAGAATCAAGTCATTTGTCATACCATTGTCAAACTATTCTGTCGATACAACTTATTTTCCGGT CTCCTTCTTAGAGCTTTTAGGTTTAGTGGAGAGCTTGAAAGGCATAACCTCAGACTATGTGGCTTCTCCATGTGTGTTGA AACTGTACGAAGGAGGACAGATAGAATTGTTCAATAATAGTGATTACCAAAAGCTTGCAGAGTTCTCTTCATACTTTCTT AGTGACACTGATCAGCAGCCAGCTTGCAATTTTGCAACTTTTGTTCCATTTATAGAGGATATCCCTTTGCAGAGAGCAGA ATGGATCAAATTCATGGGAGCTTTTGCAAATGTTGAAGCTAGAGCCAATCAAGTCTATACAGCAGTTAAGGCAAACTATT TGTGCTTGGCTAAAATTGCTACAAGTAGGACAACATTCAAGCCAACGGTAGCTTGGATGAGGTATAAAAATGGTCTTTGG TCTTTTACACAGGAAAAGTATCAATTGAAGTACGTGCAAGATGCAGGCGGAGAGATTTTGGGTGCCAACAAGAACACTTA CAATGTCTCTGATCCTGATGACTTGGAGGAATTTCATGCCATCCTATGTACCGTGGAAGTAGTCATTGATGAAACACTAA CATCTGATCCAGTCAACTACACCTTTTCAACATTTATCCAAAATCTAAACGTTGAAGATCGTTCTTGTTTTTCTTTTATT TCAAACACAAGTCTATGGAGATATGACAAAAGGGTTTATAATTCTGTAGCTCTTGACTGGTATAATGGAGCAGTGTCCCA ACCTCAATTGGCACTAGCAGATCTTATTGAAGTTTTATTTCCCACTGAAAATTACACAACGACCTATTTTAGGAACATTG CAAAGGCAGAAGTACCTATAAATATTGGTCTTGAAATGTGTGACAGGGACACATCCACAGCAATGGAGCCTACCATAGTA GCATGTGGATGA |
Microexon DNA seq | TCTCCTTCTTAGAG |
Microexon Amino Acid seq | VSFLE |
Microexon-tag DNA Seq | GTCATACCATTGTCAAACTATTCTGTCGATACAACTTATTTTCCGGTCTCCTTCTTAGAGCTTTTAGGTTTAGTGGAGAGCTTGAAAGGCATAACCTCAGACTATGTG |
Microexon-tag Amino Acid seq | VIPLSNYSVDTTYFPVSFLELLGLVESLKGITSDYV |
Transcript ID | KRG98002 |
Gene ID | Gm.24416 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >KRG98002 MDSAPSCSWLQAFSFLALVWLFNCGCVHGATPAVKVGNFSKVEDAGNFHIYYGQTFKVIKNSADGQSYLLLQNNSRIASR TKYCTSRIKSFVIPLSNYSVDTTYFPVSFLELLGLVESLKGITSDYVASPCVLKLYEGGQIELFNNSDYQKLAEFSSYFL SDTDQQPACNFATFVPFIEDIPLQRAEWIKFMGAFANVEARANQVYTAVKANYLCLAKIATSRTTFKPTVAWMRYKNGLW SFTQEKYQLKYVQDAGGEILGANKNTYNVSDPDDLEEFHAILCTVEVVIDETLTSDPVNYTFSTFIQNLNVEDRSCFSFI SNTSLWRYDKRVYNSVALDWYNGAVSQPQLALADLIEVLFPTENYTTTYFRNIAKAEVPINIGLEMCDRDTSTAMEPTIV ACG* |
CDS seq | >KRG98002 ATGGATTCAGCTCCTTCTTGTTCTTGGCTACAAGCCTTCTCCTTCTTAGCATTGGTTTGGTTATTTAACTGTGGATGTGT CCATGGAGCCACCCCAGCAGTGAAAGTAGGTAACTTTTCAAAGGTGGAAGATGCTGGAAACTTCCATATTTACTATGGCC AGACCTTCAAAGTCATTAAGAATTCTGCTGATGGCCAGAGCTACCTTCTTCTCCAGAATAATTCAAGGATTGCATCAAGG ACTAAATATTGCACATCAAGAATCAAGTCATTTGTCATACCATTGTCAAACTATTCTGTCGATACAACTTATTTTCCGGT CTCCTTCTTAGAGCTTTTAGGTTTAGTGGAGAGCTTGAAAGGCATAACCTCAGACTATGTGGCTTCTCCATGTGTGTTGA AACTGTACGAAGGAGGACAGATAGAATTGTTCAATAATAGTGATTACCAAAAGCTTGCAGAGTTCTCTTCATACTTTCTT AGTGACACTGATCAGCAGCCAGCTTGCAATTTTGCAACTTTTGTTCCATTTATAGAGGATATCCCTTTGCAGAGAGCAGA ATGGATCAAATTCATGGGAGCTTTTGCAAATGTTGAAGCTAGAGCCAATCAAGTCTATACAGCAGTTAAGGCAAACTATT TGTGCTTGGCTAAAATTGCTACAAGTAGGACAACATTCAAGCCAACGGTAGCTTGGATGAGGTATAAAAATGGTCTTTGG TCTTTTACACAGGAAAAGTATCAATTGAAGTACGTGCAAGATGCAGGCGGAGAGATTTTGGGTGCCAACAAGAACACTTA CAATGTCTCTGATCCTGATGACTTGGAGGAATTTCATGCCATCCTATGTACCGTGGAAGTAGTCATTGATGAAACACTAA CATCTGATCCAGTCAACTACACCTTTTCAACATTTATCCAAAATCTAAACGTTGAAGATCGTTCTTGTTTTTCTTTTATT TCAAACACAAGTCTATGGAGATATGACAAAAGGGTTTATAATTCTGTAGCTCTTGACTGGTATAATGGAGCAGTGTCCCA ACCTCAATTGGCACTAGCAGATCTTATTGAAGTTTTATTTCCCACTGAAAATTACACAACGACCTATTTTAGGAACATTG CAAAGGCAGAAGTACCTATAAATATTGGTCTTGAAATGTGTGACAGGGACACATCCACAGCAATGGAGCCTACCATAGTA GCATGTGGATGA |