
Microexon ID | Sl_10:62057648-62057661:- |
Species | Solanum Lycopersicum | Coordinates | 10:62057648..62057661 |
Microexon Cluster ID | MEP39 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 24,22,14,48 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | GRWGMWGGAGRYATGTAYKSYBTYCAASSTTCTGGAGCYMGKGCAGKTGGATTTCCWCAGATGGSMAATGCTGCAGCMATTGCAGCTGCCTTTGSKGGWGGTTTGCCT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTGGATTTCCTCAG |
Microexon Amino Acid seq | VGFPQ |
Microexon-tag DNA Seq | GATGCTGGAGCCCTGTACCCCTGGCAAGGTTCTGGGCCTCGTGGAGTTGGATTTCCTCAGATGGGAAATGCTGCAGCTATTGCAGCTGCCTTTCCTAGCGGTTTGCCC |
Microexon-tag Amino Acid Seq | DAGALYPWQGSGPRGVGFPQMGNAAAIAAAFPSGLP |
Microexon-tag spanning region | 62057384-62057797 |
Microexon-tag prediction score | 0.9527 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Solyc10g080710.2.1x |
Reference Transcript ID | Solyc10g080710.2.1 |
Gene ID | Solyc10g080710.2 |
Gene Name | NA |
Transcript ID | Solyc10g080710.2.1 |
Protein ID | |
Gene ID | Solyc10g080710.2 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Solyc10g080710.2.1 MTEPSKVIHVRNVGQEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQEIGAAVNAMQFYSNVQPSIRGRSVYVQFSSH QELTTVDQNAQGRGDEKAVFSIEKWSLCFGKIVFHFPGNYGLLDDLREKTGFQALIQYELTQTAISARNSLQGRNIYDGC CQLDIQFSNLDELQVSYNNERSRDFTNPNLPSEPKGKSPQQGYGDAGALYPWQGSGPRGVGFPQMGNAAAIAAAFPSGLP PGISGMNDRCTIIVSNVNPDRIDEDKLFNLFSIYGNIVRIKHLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGQRLEVN YSKYPNINTGPETRDYSNSNLNRFNRNAAKNYRYCCSPTKMIHVSSLPQDVTEEEIVAHLEEHGPIVNTKLFEMNGKKQA LVLFDNEEQATEALVCQHATSLGGSIIRISFSQPPSNQNAKMSVDSAPPVEKLTLTDVVEEARFSQRVPICSIVGRTDGG AGLAGNVVKIGGWVKTGREQGKGSFAFLEVNDGSCPGNLQVIVDASVHKLGDLVLTGTCVHVEGELKVPPEGAKQKVELR VQKVISVGTVDAAKYPLPKTKLTLEFLRDVVHLRSRTNTISAVARIRNALAYATHTFFQNNGFLYIHTPIITTSDCEGAG EMFQVTSLISEAEKLEKELKENPAPSESDTQAAEKLAKEKGEVVAQLKASKASMDKTDPNIADINKKISAAVAELQRAKE NLLKLQERSKLGERYRLSAGIPKKDGKIDYSEDFFGRQAFLTVSGQLQVETYACALSSVYTFGPTFRAEQSHTTRHLAEF WMVEPEIAFADIQDDMNCAEAYVKFLCQWLLDHCLDDMEFMTKFVDKDALSRLRMVASSNCHRITYTEAIDILEVAAKVK KFENKVEWGIDLASEHERYLTEEHFKAPVIVFNYPKGIKAFYMKVNEDNKTVAAMDLLVPKVGELIGGSQREENYEVLRS RILDLGLPLEPYEWYLDLRRYGTVKHSGFGLGFERMILFATGIENIRDVIPFPRYPGRADL* |
CDS seq | >Solyc10g080710.2.1 ATGACTGAGCCGTCAAAGGTCATTCATGTTCGCAATGTGGGCCAAGAGATCTCAGAGAATGACTTGCTTCAGCTATTTCA GCCCTTTGGAGTCATTACCAAACTTGTAATGCTTAGGGCAAAAAATCAGGCCCTCCTGCAAATGCAAGAAATTGGTGCAG CTGTAAATGCCATGCAATTCTACTCAAATGTTCAGCCCAGCATAAGGGGGAGAAGTGTATATGTACAGTTTTCATCTCAT CAAGAACTGACAACCGTGGATCAGAATGCACAAGGGCGAGGAGATGAGAAAGCAGTCTTTTCCATTGAAAAATGGAGTCT ATGTTTTGGGAAGATTGTATTTCATTTCCCTGGAAACTATGGTCTTCTCGATGACTTGAGAGAGAAAACAGGTTTTCAAG CTTTAATTCAGTACGAGTTAACTCAGACTGCTATTTCTGCTAGGAACTCTCTCCAGGGGCGTAATATCTATGATGGCTGC TGTCAGCTTGACATACAATTCTCAAACCTGGATGAATTGCAAGTGAGCTACAACAATGAGCGCTCGAGAGACTTCACCAA CCCAAATCTACCATCAGAGCCGAAGGGCAAATCTCCTCAACAAGGATATGGAGATGCTGGAGCCCTGTACCCCTGGCAAG GTTCTGGGCCTCGTGGAGTTGGATTTCCTCAGATGGGAAATGCTGCAGCTATTGCAGCTGCCTTTCCTAGCGGTTTGCCC CCTGGCATAAGCGGGATGAATGACAGGTGTACTATTATTGTATCTAATGTAAATCCAGATAGAATAGACGAGGACAAGCT TTTTAATCTGTTCTCCATTTATGGGAACATTGTCAGAATTAAACATTTACGGAATAAACCAGATCATGCTCTTGTTCAGA TGGGCGATGGCTTCCAAGCAGAGCTGGCTGTGCACTTTTTGAAGGGTGCCATGTTATTTGGCCAGCGGTTGGAAGTGAAC TATTCCAAGTACCCAAATATTAACACCGGACCAGAGACCCGCGACTACTCAAACTCAAATCTCAACCGTTTTAACCGGAA TGCAGCCAAGAACTACCGGTACTGTTGCTCCCCCACGAAGATGATCCACGTGTCAAGCCTGCCCCAGGACGTGACGGAAG AAGAGATAGTTGCTCATTTGGAGGAGCATGGTCCCATTGTGAACACAAAGCTTTTCGAAATGAATGGGAAGAAGCAGGCT CTTGTTCTTTTCGATAACGAGGAGCAGGCAACTGAGGCACTTGTGTGTCAACATGCTACATCCCTTGGCGGATCGATCAT TCGGATTTCGTTTTCTCAGCCGCCGAGCAACCAAAACGCCAAAATGTCAGTCGATTCAGCGCCGCCGGTGGAAAAACTCA CCCTAACCGACGTCGTAGAGGAGGCGAGATTCTCTCAACGCGTCCCGATCTGTTCAATCGTCGGCCGTACCGACGGAGGA GCTGGACTCGCCGGAAATGTTGTCAAAATCGGTGGTTGGGTCAAAACAGGAAGAGAACAGGGCAAGGGTTCATTCGCTTT CCTCGAAGTGAATGACGGTTCATGCCCAGGGAATCTTCAAGTGATCGTTGATGCTTCAGTTCATAAGCTTGGTGATTTGG TACTTACTGGTACTTGTGTACATGTGGAAGGTGAATTGAAGGTTCCTCCTGAAGGTGCGAAGCAGAAAGTTGAGCTTCGT GTTCAGAAGGTTATATCTGTGGGTACTGTTGATGCTGCTAAGTATCCATTGCCGAAGACTAAGTTGACGCTTGAGTTTTT AAGGGATGTTGTTCATCTTCGATCCCGAACGAACACTATTTCTGCTGTTGCTAGAATCCGTAATGCCTTAGCTTATGCCA CCCATACATTCTTCCAAAACAATGGGTTTCTTTATATCCACACCCCAATAATCACAACAAGTGATTGTGAGGGTGCTGGT GAGATGTTCCAAGTTACTAGTTTGATTAGTGAAGCTGAAAAGTTGGAGAAGGAGCTGAAAGAGAATCCTGCTCCTTCAGA ATCTGACACTCAAGCTGCTGAGAAACTCGCCAAAGAGAAAGGTGAGGTAGTTGCTCAGCTAAAAGCTAGTAAGGCGAGCA TGGACAAAACTGATCCCAATATTGCGGACATCAACAAGAAAATCAGTGCTGCAGTTGCCGAGCTACAACGAGCTAAAGAG AATCTCCTGAAGTTGCAAGAGAGATCTAAATTGGGAGAAAGATACAGACTCTCTGCTGGTATTCCTAAAAAGGATGGAAA GATTGATTACTCTGAGGATTTTTTTGGACGACAAGCTTTCTTGACAGTGTCTGGCCAACTCCAAGTTGAAACCTATGCAT GTGCACTTTCTAGTGTGTATACTTTTGGACCAACTTTTCGAGCTGAACAGTCCCACACTACTCGGCATCTTGCAGAGTTC TGGATGGTGGAGCCTGAAATTGCTTTTGCTGATATCCAGGATGATATGAATTGTGCTGAGGCGTATGTGAAGTTTCTGTG TCAGTGGTTACTTGACCATTGCCTTGATGACATGGAATTTATGACTAAATTTGTAGATAAAGATGCTCTGAGTAGACTTA GAATGGTTGCCTCATCGAACTGCCATCGGATAACTTATACAGAAGCCATAGATATTCTTGAGGTAGCAGCCAAAGTGAAG AAATTTGAAAATAAAGTAGAGTGGGGGATTGACTTAGCATCTGAACATGAAAGATATTTGACCGAAGAGCATTTTAAGGC ACCTGTTATTGTGTTCAACTATCCAAAAGGGATAAAAGCATTTTACATGAAGGTGAATGAAGACAACAAGACAGTTGCTG CCATGGATCTGCTAGTACCAAAGGTGGGAGAACTAATTGGAGGAAGCCAAAGAGAAGAGAATTATGAAGTCCTCAGATCA AGGATACTGGATCTGGGTCTACCACTAGAGCCATATGAGTGGTATCTGGACCTGAGGCGCTATGGTACTGTAAAGCACAG TGGTTTCGGTTTAGGCTTTGAACGAATGATTCTGTTTGCCACTGGGATAGAAAACATTCGGGATGTCATTCCCTTCCCTA GATATCCAGGGAGAGCCGATCTTTAA |
Sl_10:62057648-62057661:- does not have available information here.