
Microexon ID | Ps_NC_039363.1:19419868-19419881:- |
Species | Papaver somniferum | Coordinates | NC_039363.1:19419868..19419881 |
Microexon Cluster ID | MEP39 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 24,22,14,48 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | GRWGMWGGAGRYATGTAYKSYBTYCAASSTTCTGGAGCYMGKGCAGKTGGATTTCCWCAGATGGSMAATGCTGCAGCMATTGCAGCTGCCTTTGSKGGWGGTTTGCCT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTGGATATCCACAG |
Microexon Amino Acid seq | GGYPQ |
Microexon-tag DNA Seq | GCTGAGGGAGGTTTATATGGTGCACAACCTTCTGGAGCTAGGCCAGGTGGATATCCACAGATGGGAAATGCAGCAGCTGTAGCAGCTGCATTTGGAGGCGGGTTGCCT |
Microexon-tag Amino Acid Seq | AEGGLYGAQPSGARPGGYPQMGNAAAVAAAFGGGLP |
Microexon-tag spanning region | 19419343-19420023 |
Microexon-tag prediction score | 0.936 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026535807.1x |
Reference Transcript ID | XM_026535807.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026535807.1 |
Protein ID | XP_026391592.1 |
Gene ID | LOC113287127 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >XP_026391592.1 MTEPSKVIHVRNVGHEIAENDLLQLVQPFGVVTKLVMLRAKNQALLQMQDVAAAVDVIQYFTNVQPSVRGRNVYIQFSSH QELTTMDQNGQGRKSSEQETEPNRILLVSIHHLLYPITVEVLHQVFSPHGYVEKIVTFQKSAGSQALIQFQTRQSAVAAR TALQGRNIYDGCCQLDVQFSNLSELQVNFNNERSRDYTNPSLPTEQKGRSSQPNYAEGGLYGAQPSGARPGGYPQMGNAA AVAAAFGGGLPPGISGTNERCTVLVSNLDPDRIDEDKLFNLFSIYGNIARIKLLRNKPDHALVQMGDGFQAELAVHFLKG AMLFEKRMEVNFSKHPTITAAPDTHEYQNSNLNRFNRNAAKNYRYCCSPTKIIHLSTLPQEITEEEIVCHLEEHGTIVNT KLFEVNGKKQALIMFETEEQATEALVCKHATTIDRSVIRISFSQLQNI* |
CDS seq | >XM_026535807.1 ATGACTGAACCTTCTAAGGTCATTCATGTTCGTAATGTAGGCCACGAAATAGCGGAGAATGATTTGCTTCAATTAGTACA GCCATTTGGTGTTGTTACTAAGCTTGTTATGTTAAGGGCTAAAAATCAGGCACTTCTTCAGATGCAAGATGTGGCAGCTG CTGTTGATGTGATACAGTACTTCACTAATGTTCAGCCTAGTGTCAGAGGGAGGAATGTTTACATTCAATTCTCTTCACAT CAAGAATTGACGACAATGGATCAGAATGGTCAAGGACGCAAGAGCAGTGAACAGGAAACAGAACCCAATCGAATTCTATT AGTATCAATTCATCACCTGCTCTATCCTATAACGGTGGAAGTGCTGCATCAAGTGTTTTCTCCTCATGGGTATGTGGAGA AGATCGTCACGTTTCAGAAGTCAGCTGGTTCTCAAGCCCTTATACAATTTCAAACACGCCAGAGTGCTGTTGCTGCAAGG ACAGCTCTCCAAGGACGCAATATTTATGATGGTTGTTGTCAGCTGGATGTTCAGTTCTCAAACCTCAGTGAGTTACAAGT AAACTTCAACAACGAGCGCTCTAGGGATTACACCAACCCATCTTTGCCTACTGAACAAAAAGGCAGATCCTCCCAGCCTA ACTATGCTGAGGGAGGTTTATATGGTGCACAACCTTCTGGAGCTAGGCCAGGTGGATATCCACAGATGGGAAATGCAGCA GCTGTAGCAGCTGCATTTGGAGGCGGGTTGCCTCCTGGTATTAGCGGTACCAATGAACGATGCACAGTCTTGGTTTCCAA CCTTGATCCCGATAGAATTGATGAGGATAAGCTCTTCAACCTGTTCTCCATTTATGGAAACATCGCGAGAATCAAACTTC TCCGCAACAAACCAGATCATGCCCTTGTTCAGATGGGTGATGGATTTCAAGCTGAATTGGCCGTACACTTCTTGAAGGGA GCCATGCTGTTTGAAAAGCGTATGGAGGTGAACTTTTCAAAGCATCCAACTATTACTGCAGCACCTGACACGCATGAGTA CCAGAATTCGAACCTGAATCGGTTCAATCGCAATGCAGCAAAGAATTACCGTTACTGCTGTTCCCCAACCAAGATTATCC ACTTGTCCACCCTTCCTCAAGAAATTACTGAGGAAGAAATTGTCTGCCACCTCGAGGAGCATGGAACCATAGTGAACACC AAGCTTTTTGAAGTGAATGGCAAAAAACAGGCCCTTATCATGTTTGAAACAGAGGAGCAGGCTACTGAGGCTCTTGTGTG CAAGCACGCAACAACCATAGATCGTTCAGTCATCCGGATCTCCTTCTCCCAGCTGCAGAACATCTAA |
Microexon DNA seq | GTGGATATCCACAG |
Microexon Amino Acid seq | GGYPQ |
Microexon-tag DNA Seq | GCTGAGGGAGGTTTATATGGTGCACAACCTTCTGGAGCTAGGCCAGGTGGATATCCACAGATGGGAAATGCAGCAGCTGTAGCAGCTGCATTTGGAGGCGGGTTGCCT |
Microexon-tag Amino Acid seq | AEGGLYGAQPSGARPGGYPQMGNAAAVAAAFGGGLP |
Transcript ID | XM_026535807.1 |
Gene ID | Ps.34787 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >XM_026535807.1 MTEPSKVIHVRNVGHEIAENDLLQLVQPFGVVTKLVMLRAKNQALLQMQDVAAAVDVIQYFTNVQPSVRGRNVYIQFSSH QELTTMDQNGQGRKSSEQETEPNRILLVSIHHLLYPITVEVLHQVFSPHGYVEKIVTFQKSAGSQALIQFQTRQSAVAAR TALQGRNIYDGCCQLDVQFSNLSELQVNFNNERSRDYTNPSLPTEQKGRSSQPNYAEGGLYGAQPSGARPGGYPQMGNAA AVAAAFGGGLPPGISGTNERCTVLVSNLDPDRIDEDKLFNLFSIYGNIARIKLLRNKPDHALVQMGDGFQAELAVHFLKG AMLFEKRMEVNFSKHPTITAAPDTHEYQNSNLNRFNRNAAKNYRYCCSPTKIIHLSTLPQEITEEEIVCHLEEHGTIVNT KLFEVNGKKQALIMFETEEQATEALVCKHATTIDRSVIRISFSQLQNI* |
CDS seq | >XM_026535807.1 ATGACTGAACCTTCTAAGGTCATTCATGTTCGTAATGTAGGCCACGAAATAGCGGAGAATGATTTGCTTCAATTAGTACA GCCATTTGGTGTTGTTACTAAGCTTGTTATGTTAAGGGCTAAAAATCAGGCACTTCTTCAGATGCAAGATGTGGCAGCTG CTGTTGATGTGATACAGTACTTCACTAATGTTCAGCCTAGTGTCAGAGGGAGGAATGTTTACATTCAATTCTCTTCACAT CAAGAATTGACGACAATGGATCAGAATGGTCAAGGACGCAAGAGCAGTGAACAGGAAACAGAACCCAATCGAATTCTATT AGTATCAATTCATCACCTGCTCTATCCTATAACGGTGGAAGTGCTGCATCAAGTGTTTTCTCCTCATGGGTATGTGGAGA AGATCGTCACGTTTCAGAAGTCAGCTGGTTCTCAAGCCCTTATACAATTTCAAACACGCCAGAGTGCTGTTGCTGCAAGG ACAGCTCTCCAAGGACGCAATATTTATGATGGTTGTTGTCAGCTGGATGTTCAGTTCTCAAACCTCAGTGAGTTACAAGT AAACTTCAACAACGAGCGCTCTAGGGATTACACCAACCCATCTTTGCCTACTGAACAAAAAGGCAGATCCTCCCAGCCTA ACTATGCTGAGGGAGGTTTATATGGTGCACAACCTTCTGGAGCTAGGCCAGGTGGATATCCACAGATGGGAAATGCAGCA GCTGTAGCAGCTGCATTTGGAGGCGGGTTGCCTCCTGGTATTAGCGGTACCAATGAACGATGCACAGTCTTGGTTTCCAA CCTTGATCCCGATAGAATTGATGAGGATAAGCTCTTCAACCTGTTCTCCATTTATGGAAACATCGCGAGAATCAAACTTC TCCGCAACAAACCAGATCATGCCCTTGTTCAGATGGGTGATGGATTTCAAGCTGAATTGGCCGTACACTTCTTGAAGGGA GCCATGCTGTTTGAAAAGCGTATGGAGGTGAACTTTTCAAAGCATCCAACTATTACTGCAGCACCTGACACGCATGAGTA CCAGAATTCGAACCTGAATCGGTTCAATCGCAATGCAGCAAAGAATTACCGTTACTGCTGTTCCCCAACCAAGATTATCC ACTTGTCCACCCTTCCTCAAGAAATTACTGAGGAAGAAATTGTCTGCCACCTCGAGGAGCATGGAACCATAGTGAACACC AAGCTTTTTGAAGTGAATGGCAAAAAACAGGCCCTTATCATGTTTGAAACAGAGGAGCAGGCTACTGAGGCTCTTGTGTG CAAGCACGCAACAACCATAGATCGTTCAGTCATCCGGATCTCCTTCTCCCAGCTGCAGAACATCTAA |