
Microexon ID | Ps_NC_039358.1:38926747-38926760:- |
Species | Papaver somniferum | Coordinates | NC_039358.1:38926747..38926760 |
Microexon Cluster ID | MEP39 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 24,22,14,48 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | GRWGMWGGAGRYATGTAYKSYBTYCAASSTTCTGGAGCYMGKGCAGKTGGATTTCCWCAGATGGSMAATGCTGCAGCMATTGCAGCTGCCTTTGSKGGWGGTTTGCCT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTGGATATCCACAG |
Microexon Amino Acid seq | GGYPQ |
Microexon-tag DNA Seq | GCTGAGGGAGGTTTATATGGTGTACAACCTTCTGGAGCTAGGCCAGGTGGATATCCACAGATGGGAAATGCGGCAGCTGTAGCAGCTGCATTTGGAGGCGGGTTGCCT |
Microexon-tag Amino Acid Seq | AEGGLYGVQPSGARPGGYPQMGNAAAVAAAFGGGLP |
Microexon-tag spanning region | 38926183-38926902 |
Microexon-tag prediction score | 0.9385 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026533025.1x |
Reference Transcript ID | XM_026533025.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026533025.1 |
Protein ID | XP_026388810.1 |
Gene ID | LOC113283693 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >XP_026388810.1 MTEPSKVIHVRNVGHEIAENDLLQLVQPFGVVTKLVMLRAKNQALLQMQDVAAAVDVIQYFTNVQPSVRGRNVYIQFSSH QELTTMDQNGQGRKSGEQISQETEPNRILLVSIHHLLYPITVEVLHQVFSPHGYVEKIVTFQKSAGSQALIQFQTRQSAV AARTALQGRNIYDGCCQLDVQFSNLSELQVNFNNERSRDYTNPSLPTEQKGRSSQPNYAEGGLYGVQPSGARPGGYPQMG NAAAVAAAFGGGLPPGISGTNERCTVLVSNLDPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHF LKGAMLFEKRMEVNFSKHPTITAAPDTHEYQNSNLNRFNRNAAKNYRYCCSPTKIIHLSTLPQEITEEEIVCHLEEHGTI VNTKLFEVNGKKQALIMFETEEQATEALVCKHAITINRSVIRISFSQLQNI* |
CDS seq | >XM_026533025.1 ATGACTGAACCTTCTAAGGTCATTCATGTTCGTAATGTAGGCCACGAAATAGCCGAGAATGATTTGCTTCAATTAGTACA GCCATTTGGTGTTGTCACTAAGCTTGTCATGTTAAGGGCTAAAAATCAGGCACTTCTTCAGATGCAAGATGTGGCAGCTG CTGTTGATGTGATACAGTACTTCACTAATGTTCAACCTAGTGTCAGAGGGAGGAATGTTTACATTCAGTTCTCTTCACAT CAAGAATTGACAACAATGGATCAGAATGGTCAAGGACGCAAGAGTGGTGAACAGATATCTCAGGAAACAGAACCCAATCG AATTCTATTAGTATCAATTCATCACCTGCTCTATCCTATAACGGTGGAAGTGCTGCATCAAGTGTTCTCTCCTCATGGGT ATGTGGAGAAGATCGTCACGTTTCAGAAGTCAGCTGGTTCTCAAGCCCTTATACAATTTCAAACACGCCAGAGTGCTGTT GCTGCAAGGACAGCTCTCCAAGGACGCAATATTTATGATGGTTGTTGTCAGCTGGATGTTCAGTTCTCAAACCTCAGTGA GTTACAAGTAAACTTCAACAATGAGCGCTCTAGGGATTACACCAACCCATCTTTGCCTACTGAACAAAAAGGCAGATCCT CCCAGCCTAACTATGCTGAGGGAGGTTTATATGGTGTACAACCTTCTGGAGCTAGGCCAGGTGGATATCCACAGATGGGA AATGCGGCAGCTGTAGCAGCTGCATTTGGAGGCGGGTTGCCTCCTGGTATTAGCGGTACCAATGAACGATGCACAGTCTT GGTTTCCAACCTTGATCCCGATAGAATTGATGAGGATAAGCTCTTCAACCTATTCTCCATTTATGGAAACATCGTGAGAA TCAAACTTCTCCGCAACAAACCAGATCATGCCCTTGTTCAGATGGGTGATGGATTTCAAGCTGAATTGGCTGTACACTTC TTGAAGGGAGCAATGCTGTTTGAAAAGCGTATGGAGGTGAACTTTTCAAAGCATCCAACTATTACTGCAGCTCCTGACAC ACATGAGTACCAGAATTCGAACCTGAATCGGTTCAATCGCAATGCAGCAAAGAATTACCGTTACTGCTGTTCCCCAACCA AGATTATCCACTTGTCAACCCTCCCTCAAGAAATTACAGAGGAAGAAATTGTTTGCCACCTCGAGGAGCATGGAACCATA GTGAACACCAAGCTTTTTGAAGTGAATGGCAAAAAACAGGCTCTTATCATGTTTGAAACAGAGGAGCAGGCCACTGAGGC TCTCGTGTGCAAGCACGCAATAACCATAAATCGCTCAGTCATCCGGATCTCCTTCTCCCAGCTGCAGAACATCTAA |
Microexon DNA seq | GTGGATATCCACAG |
Microexon Amino Acid seq | GGYPQ |
Microexon-tag DNA Seq | GCTGAGGGAGGTTTATATGGTGTACAACCTTCTGGAGCTAGGCCAGGTGGATATCCACAGATGGGAAATGCGGCAGCTGTAGCAGCTGCATTTGGAGGCGGGTTGCCT |
Microexon-tag Amino Acid seq | AEGGLYGVQPSGARPGGYPQMGNAAAVAAAFGGGLP |
Transcript ID | XM_026533031.1 |
Gene ID | Ps.1346 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >XM_026533031.1 MTEPSKVIHVRNVGHEIAENDLLQLVQPFGVVTKLVMLRAKNQALLQMQDVAAAVDVIQYFTNVQPSVRGRNVYIQFSSH QELTTMDQNGQGRKSGEQETEPNRILLVSIHHLLYPITVEVLHQVFSPHGYVEKIVTFQKSAGSQALIQFQTRQSAVAAR TALQGRNIYDGCCQLDVQFSNLSELQVNFNNERSRDYTNPSLPTEQKGRSSQPNYAEGGLYGVQPSGARPGGYPQMGNAA AVAAAFGGGLPPGISGTNERCTVLVSNLDPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKG AMLFEKRMEVNFSKHPTITAAPDTHEYQNSNLNRFNRNAAKNYRYCCSPTKIIHLSTLPQEITEEEIVCHLEEHGTIVNT KLFEVNGKKQALIMFETEEQATEALVCKHAITINRSVIRISFSQLQNI* |
CDS seq | >XM_026533031.1 ATGACTGAACCTTCTAAGGTCATTCATGTTCGTAATGTAGGCCACGAAATAGCCGAGAATGATTTGCTTCAATTAGTACA GCCATTTGGTGTTGTCACTAAGCTTGTCATGTTAAGGGCTAAAAATCAGGCACTTCTTCAGATGCAAGATGTGGCAGCTG CTGTTGATGTGATACAGTACTTCACTAATGTTCAACCTAGTGTCAGAGGGAGGAATGTTTACATTCAGTTCTCTTCACAT CAAGAATTGACAACAATGGATCAGAATGGTCAAGGACGCAAGAGTGGTGAACAGGAAACAGAACCCAATCGAATTCTATT AGTATCAATTCATCACCTGCTCTATCCTATAACGGTGGAAGTGCTGCATCAAGTGTTCTCTCCTCATGGGTATGTGGAGA AGATCGTCACGTTTCAGAAGTCAGCTGGTTCTCAAGCCCTTATACAATTTCAAACACGCCAGAGTGCTGTTGCTGCAAGG ACAGCTCTCCAAGGACGCAATATTTATGATGGTTGTTGTCAGCTGGATGTTCAGTTCTCAAACCTCAGTGAGTTACAAGT AAACTTCAACAATGAGCGCTCTAGGGATTACACCAACCCATCTTTGCCTACTGAACAAAAAGGCAGATCCTCCCAGCCTA ACTATGCTGAGGGAGGTTTATATGGTGTACAACCTTCTGGAGCTAGGCCAGGTGGATATCCACAGATGGGAAATGCGGCA GCTGTAGCAGCTGCATTTGGAGGCGGGTTGCCTCCTGGTATTAGCGGTACCAATGAACGATGCACAGTCTTGGTTTCCAA CCTTGATCCCGATAGAATTGATGAGGATAAGCTCTTCAACCTATTCTCCATTTATGGAAACATCGTGAGAATCAAACTTC TCCGCAACAAACCAGATCATGCCCTTGTTCAGATGGGTGATGGATTTCAAGCTGAATTGGCTGTACACTTCTTGAAGGGA GCAATGCTGTTTGAAAAGCGTATGGAGGTGAACTTTTCAAAGCATCCAACTATTACTGCAGCTCCTGACACACATGAGTA CCAGAATTCGAACCTGAATCGGTTCAATCGCAATGCAGCAAAGAATTACCGTTACTGCTGTTCCCCAACCAAGATTATCC ACTTGTCAACCCTCCCTCAAGAAATTACAGAGGAAGAAATTGTTTGCCACCTCGAGGAGCATGGAACCATAGTGAACACC AAGCTTTTTGAAGTGAATGGCAAAAAACAGGCTCTTATCATGTTTGAAACAGAGGAGCAGGCCACTGAGGCTCTCGTGTG CAAGCACGCAATAACCATAAATCGCTCAGTCATCCGGATCTCCTTCTCCCAGCTGCAGAACATCTAA |