
Microexon ID | Ha_5:121912575-121912588:- |
Species | Helianthus annuus | Coordinates | 5:121912575..121912588 |
Microexon Cluster ID | MEP39 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 24,22,14,48 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | GRWGMWGGAGRYATGTAYKSYBTYCAASSTTCTGGAGCYMGKGCAGKTGGATTTCCWCAGATGGSMAATGCTGCAGCMATTGCAGCTGCCTTTGSKGGWGGTTTGCCT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Ha_5:121912575-121912588:- does not have available information here.
Transcript ID | OTG25119 |
Protein ID | OTG25119 |
Gene ID | HannXRQ_Chr05g0144181 |
Gene Name | PTB3 |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >OTG25119 MLVMRFRRDCPDLLQLFQPFGVINKLVMLRAKNQALLQMQDVPAAVSAMQFYANVQPSIRGRNVYVQFSSHQELTTMEQN TQGRVDEEPNRILLVTIHHMLYPITVEVLHQVFSPHGYVEKIVTFQKSAGFQALIQFQLRQSAVVARNSLQGRNIYDGCC QLDIQFSNLEELQVNYNNERSRDFTNPSLPSEQKGRPSQPGYGDAGAGYPQMNNAAAIAAAFGGGLPSGITGTNDRCTVL ASNLNPDRIDEDKLFNLFSLYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGATLFGKRLEVNFSKHPNITMGAET HEYLNSNLNRFNRNAAKNYRYCCSPTKMIHLSTLPQDVTEDEIISHLEEHGSIVNTKVFEMNGKKQALVMFENEEQATEA LVCKHATTLADSMIRISFSQLQTI* |
CDS seq | >OTG25119 ATGTTGGTCATGAGATTTCGGAGGGATTGTCCTGATCTGCTTCAGCTATTCCAGCCATTTGGAGTCATTAATAAACTAGT AATGCTTCGTGCAAAAAACCAGGCTCTCCTACAAATGCAAGATGTTCCTGCTGCTGTCAGTGCAATGCAATTTTATGCCA ATGTGCAGCCAAGCATAAGGGGAAGAAATGTTTATGTTCAGTTTTCATCTCATCAAGAGCTAACCACAATGGAGCAAAAT ACTCAAGGACGAGTAGACGAGGAGCCCAATCGCATTCTTTTGGTCACCATTCATCATATGCTGTACCCTATAACTGTGGA AGTCCTGCATCAAGTTTTTTCTCCTCATGGATATGTCGAGAAAATTGTCACCTTTCAAAAGTCAGCTGGTTTTCAAGCAC TAATTCAATTTCAGTTACGGCAAAGTGCTGTGGTTGCAAGAAATTCTCTTCAGGGGAGAAATATTTATGATGGTTGCTGC CAACTAGATATTCAGTTCTCAAATCTTGAAGAGTTGCAAGTCAACTACAATAATGAGCGGTCTAGGGATTTTACAAACCC ATCACTACCCTCAGAACAGAAGGGCAGACCCTCCCAACCTGGATATGGAGATGCGGGAGCTGGATATCCACAGATGAACA ACGCGGCTGCAATTGCCGCTGCATTTGGAGGCGGCTTGCCTTCCGGAATCACCGGGACCAACGACAGATGCACTGTTCTT GCATCTAATTTAAATCCTGATCGGATAGACGAGGACAAGCTGTTCAACTTGTTTTCTTTATATGGGAACATTGTGAGAAT CAAGCTGCTTCGCAACAAACCAGATCATGCTCTTGTTCAGATGGGTGACGGGTTTCAGGCTGAGTTGGCAGTACACTTTT TGAAGGGAGCCACTCTGTTTGGGAAGCGGTTGGAGGTTAATTTCTCAAAGCATCCTAATATTACAATGGGTGCTGAAACA CACGAGTATCTAAACTCCAATTTGAACCGGTTCAACCGCAATGCTGCTAAAAACTACCGTTACTGTTGCTCACCAACCAA AATGATCCACCTATCGACCCTACCGCAGGATGTGACGGAAGACGAGATTATATCCCATCTTGAAGAACACGGGAGCATCG TCAACACCAAAGTGTTTGAAATGAACGGTAAAAAACAGGCTCTTGTTATGTTTGAAAACGAGGAACAAGCAACTGAAGCA CTTGTGTGCAAGCATGCAACTACACTTGCAGATTCTATGATTCGTATATCCTTTTCTCAGTTGCAGACAATTTGA |
Microexon DNA seq | CTGGATATCCACAG |
Microexon Amino Acid seq | AGYPQ |
Microexon-tag DNA Seq | GAACAGAAGGGCAGACCCTCCCAACCTGGATATGGAGATGCGGGAGCTGGATATCCACAGATGAACAACGCGGCTGCAATTGCCGCTGCATTTGGAGGCGGCTTGCCT |
Microexon-tag Amino Acid seq | EQKGRPSQPGYGDAGAGYPQMNNAAAIAAAFGGGLP |
Transcript ID | Ha.44799.1 |
Gene ID | Ha.44799 |
Gene Name | PTB3 |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Ha.44799.1 MAEPSKVIHVRNVGHEISEPDLLQLFQPFGVINKLVMLRAKNQALLQMQDVPAAVSAMQFYANVQPSIRGRNVYVQFSSH QELTTMEQNTQGRVDEEPNRILLVTIHHMLYPITVEVLHQVFSPHGYVEKIVTFQKSAGFQALIQFQLRQSAVVARNSLQ GRNIYDGCCQLDIQFSNLEELQVNYNNERSRDFTNPSLPSEQKGRPSQPGYGDAGAGYPQMNNAAAIAAAFGGGLPSGIT GTNDRCTVLASNLNPDRIDEDKLFNLFSLYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGATLFGKRLEVNFSKH PNITMGAETHEYLNSNLNRFNRNAAKNYRYCCSPTKMIHLSTLPQDVTEDEIISHLEEHGSIVNTKVFEMNGKKQALVMF ENEEQATEALVCKHATTLADSMIRISFSQLQTI* |
CDS seq | >Ha.44799.1 ATGGCAGAGCCTTCCAAAGTCATTCACGTCCGGAATGTTGGTCATGAGATTTCGGAGCCTGATCTGCTTCAGCTATTCCA GCCATTTGGAGTCATTAATAAACTAGTAATGCTTCGTGCAAAAAACCAGGCTCTCCTACAAATGCAAGATGTTCCTGCTG CTGTCAGTGCAATGCAATTTTATGCCAATGTGCAGCCAAGCATAAGGGGAAGAAATGTTTATGTTCAGTTTTCATCTCAT CAAGAGCTAACCACAATGGAGCAAAATACTCAAGGACGAGTAGACGAGGAGCCCAATCGCATTCTTTTGGTCACCATTCA TCATATGCTGTACCCTATAACTGTGGAAGTCCTGCATCAAGTTTTTTCTCCTCATGGATATGTCGAGAAAATTGTCACCT TTCAAAAGTCAGCTGGTTTTCAAGCACTAATTCAATTTCAGTTACGGCAAAGTGCTGTGGTTGCAAGAAATTCTCTTCAG GGGAGAAATATTTATGATGGTTGCTGCCAACTAGATATTCAGTTCTCAAATCTTGAAGAGTTGCAAGTCAACTACAATAA TGAGCGGTCTAGGGATTTTACAAACCCATCACTACCCTCAGAACAGAAGGGCAGACCCTCCCAACCTGGATATGGAGATG CGGGAGCTGGATATCCACAGATGAACAACGCGGCTGCAATTGCCGCTGCATTTGGAGGCGGCTTGCCTTCCGGAATCACC GGGACCAACGACAGATGCACTGTTCTTGCATCTAATTTAAATCCTGATCGGATAGACGAGGACAAGCTGTTCAACTTGTT TTCTTTATATGGGAACATTGTGAGAATCAAGCTGCTTCGCAACAAACCAGATCATGCTCTTGTTCAGATGGGTGACGGGT TTCAGGCTGAGTTGGCAGTACACTTTTTGAAGGGAGCCACTCTGTTTGGGAAGCGGTTGGAGGTTAATTTCTCAAAGCAT CCTAATATTACAATGGGTGCTGAAACACACGAGTATCTAAACTCCAATTTGAACCGGTTCAACCGCAATGCTGCTAAAAA CTACCGTTACTGTTGCTCACCAACCAAAATGATCCACCTATCGACCCTACCGCAGGATGTGACGGAAGACGAGATTATAT CCCATCTTGAAGAACACGGGAGCATCGTCAACACCAAAGTGTTTGAAATGAACGGTAAAAAACAGGCTCTTGTTATGTTT GAAAACGAGGAACAAGCAACTGAAGCACTTGTGTGCAAGCATGCAACTACACTTGCAGATTCTATGATTCGTATATCCTT TTCTCAGTTGCAGACAATTTGA |