Microexon ID At_1:16276430-16276443:-
Species Arabidopsis thaliana
Coordinates 1:16276430..16276443
Microexon Cluster ID MEP39
Size 14
Phase 1
Pfam Domain Motif Unknown
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 24,22,14,48
Microexon location in the Microexon-tag 3
Microexon-tag DNA Seq GRWGMWGGAGRYATGTAYKSYBTYCAASSTTCTGGAGCYMGKGCAGKTGGATTTCCWCAGATGGSMAATGCTGCAGCMATTGCAGCTGCCTTTGSKGGWGGTTTGCCT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
At_1:16276430-16276443:- does not have available information here.
Transcript ID AT1G43190.1
Protein ID AT1G43190.1
Gene ID AT1G43190
Gene Name PTB3
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >AT1G43190.1
MAESSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAVSALQFFTNVQPTIRGRNVYVQFSSH
QELTTIEQNIHGREDEPNRILLVTIHHMLYPITVDVLHQVFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQG
RNIYDGCCQLDIQFSNLEELQVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTGVAYPQMANTSAIAAAFGGGLPPGITG
TNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHP
NITPGTDSHDYVNSNLNRFNRNAAKNYRYCCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAVVNTKVFEMNGKKQALVQFE
NEEEAAEALVCKHATSLGGSIIRISFSQLQTI*
CDS seq >AT1G43190.1
ATGGCGGAATCTTCCAAAGTCGTTCATGTTCGTAATGTTGGTCATGAGATTTCTGAAAATGATTTGCTTCAGCTTTTTCA
ACCATTTGGTGTTATAACTAAGCTTGTGATGCTCAGGGCAAAGAATCAGGCTCTTCTCCAAATGCAAGATGTTTCTTCTG
CAGTTAGTGCTCTTCAGTTTTTTACTAATGTTCAGCCAACTATAAGAGGTAGGAATGTGTATGTCCAATTCTCTTCTCAC
CAAGAATTGACAACGATAGAGCAGAATATTCATGGAAGGGAAGATGAGCCGAACCGTATTCTCTTAGTCACAATCCATCA
CATGCTGTATCCAATTACTGTTGACGTCCTGCATCAAGTTTTTTCTCCCTATGGATTTGTCGAGAAGCTCGTCACTTTCC
AGAAGTCTGCTGGTTTTCAAGCTCTTATACAGTATCAGGTACAACAGTGTGCTGCCTCTGCTAGAACTGCTCTACAGGGT
CGTAACATATATGACGGGTGTTGTCAGTTGGATATCCAGTTCTCAAACCTTGAGGAGCTGCAAGTAAATTACAACAATGA
TCGATCTAGGGATTATACAAATCCAAACCTGCCTGCAGAACAAAAAGGCCGTTCATCGCATCCTTGCTATGGTGATACAG
GAGTGGCATATCCTCAGATGGCAAACACATCAGCGATTGCAGCTGCCTTTGGAGGAGGCTTGCCTCCGGGTATAACCGGC
ACAAATGATAGGTGTACAGTCCTTGTCTCTAACCTGAATGCAGATAGTATTGATGAAGATAAGCTATTCAATCTATTTTC
TCTTTACGGGAACATTGTAAGGATTAAGCTTCTTCGGAACAAACCTGACCATGCCCTTGTCCAAATGGGCGATGGTTTCC
AAGCTGAACTTGCAGTACATTTCCTCAAGGGAGCAATGCTGTTTGGTAAGCGGTTAGAAGTAAACTTCTCAAAGCATCCA
AATATAACACCAGGCACAGACTCTCATGATTATGTAAACTCTAACCTGAACCGCTTCAACCGCAATGCTGCAAAGAATTA
CCGCTATTGCTGCTCCCCTACAAAGATGATTCACTTATCGACTCTTCCTCAAGACGTGACAGAGGAGGAAGTGATGAACC
ATGTCCAAGAACACGGTGCAGTAGTGAACACAAAAGTGTTTGAGATGAACGGGAAAAAGCAAGCTCTGGTACAGTTTGAG
AACGAGGAGGAAGCTGCGGAAGCATTGGTATGCAAGCACGCGACTTCTCTAGGCGGATCAATTATCAGAATCTCCTTCTC
CCAGCTACAGACGATTTAA
Microexon DNA seq TGGCATATCCTCAG
Microexon Amino Acid seq VAYPQ
Microexon-tag DNA Seq GAACAAAAAGGCCGTTCATCGCATCCTTGCTATGGTGATACAGGAGTGGCATATCCTCAGATGGCAAACACATCAGCGATTGCAGCTGCCTTTGGAGGAGGCTTGCCT
Microexon-tag Amino Acid seq EQKGRSSHPCYGDTGVAYPQMANTSAIAAAFGGGLP
Transcript ID AT1G43190.1
Gene ID At.3762
Gene Name PTB3
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >AT1G43190.1
MAESSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAVSALQFFTNVQPTIRGRNVYVQFSSH
QELTTIEQNIHGREDEPNRILLVTIHHMLYPITVDVLHQVFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQG
RNIYDGCCQLDIQFSNLEELQVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTGVAYPQMANTSAIAAAFGGGLPPGITG
TNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHP
NITPGTDSHDYVNSNLNRFNRNAAKNYRYCCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAVVNTKVFEMNGKKQALVQFE
NEEEAAEALVCKHATSLGGSIIRISFSQLQTI*
CDS seq >AT1G43190.1
ATGGCGGAATCTTCCAAAGTCGTTCATGTTCGTAATGTTGGTCATGAGATTTCTGAAAATGATTTGCTTCAGCTTTTTCA
ACCATTTGGTGTTATAACTAAGCTTGTGATGCTCAGGGCAAAGAATCAGGCTCTTCTCCAAATGCAAGATGTTTCTTCTG
CAGTTAGTGCTCTTCAGTTTTTTACTAATGTTCAGCCAACTATAAGAGGTAGGAATGTGTATGTCCAATTCTCTTCTCAC
CAAGAATTGACAACGATAGAGCAGAATATTCATGGAAGGGAAGATGAGCCGAACCGTATTCTCTTAGTCACAATCCATCA
CATGCTGTATCCAATTACTGTTGACGTCCTGCATCAAGTTTTTTCTCCCTATGGATTTGTCGAGAAGCTCGTCACTTTCC
AGAAGTCTGCTGGTTTTCAAGCTCTTATACAGTATCAGGTACAACAGTGTGCTGCCTCTGCTAGAACTGCTCTACAGGGT
CGTAACATATATGACGGGTGTTGTCAGTTGGATATCCAGTTCTCAAACCTTGAGGAGCTGCAAGTAAATTACAACAATGA
TCGATCTAGGGATTATACAAATCCAAACCTGCCTGCAGAACAAAAAGGCCGTTCATCGCATCCTTGCTATGGTGATACAG
GAGTGGCATATCCTCAGATGGCAAACACATCAGCGATTGCAGCTGCCTTTGGAGGAGGCTTGCCTCCGGGTATAACCGGC
ACAAATGATAGGTGTACAGTCCTTGTCTCTAACCTGAATGCAGATAGTATTGATGAAGATAAGCTATTCAATCTATTTTC
TCTTTACGGGAACATTGTAAGGATTAAGCTTCTTCGGAACAAACCTGACCATGCCCTTGTCCAAATGGGCGATGGTTTCC
AAGCTGAACTTGCAGTACATTTCCTCAAGGGAGCAATGCTGTTTGGTAAGCGGTTAGAAGTAAACTTCTCAAAGCATCCA
AATATAACACCAGGCACAGACTCTCATGATTATGTAAACTCTAACCTGAACCGCTTCAACCGCAATGCTGCAAAGAATTA
CCGCTATTGCTGCTCCCCTACAAAGATGATTCACTTATCGACTCTTCCTCAAGACGTGACAGAGGAGGAAGTGATGAACC
ATGTCCAAGAACACGGTGCAGTAGTGAACACAAAAGTGTTTGAGATGAACGGGAAAAAGCAAGCTCTGGTACAGTTTGAG
AACGAGGAGGAAGCTGCGGAAGCATTGGTATGCAAGCACGCGACTTCTCTAGGCGGATCAATTATCAGAATCTCCTTCTC
CCAGCTACAGACGATTTAA