
Microexon ID | At_1:16276430-16276443:- |
Species | Arabidopsis thaliana | Coordinates | 1:16276430..16276443 |
Microexon Cluster ID | MEP39 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 24,22,14,48 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | GRWGMWGGAGRYATGTAYKSYBTYCAASSTTCTGGAGCYMGKGCAGKTGGATTTCCWCAGATGGSMAATGCTGCAGCMATTGCAGCTGCCTTTGSKGGWGGTTTGCCT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
At_1:16276430-16276443:- does not have available information here.
Transcript ID | AT1G43190.1 |
Protein ID | AT1G43190.1 |
Gene ID | AT1G43190 |
Gene Name | PTB3 |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >AT1G43190.1 MAESSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAVSALQFFTNVQPTIRGRNVYVQFSSH QELTTIEQNIHGREDEPNRILLVTIHHMLYPITVDVLHQVFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQG RNIYDGCCQLDIQFSNLEELQVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTGVAYPQMANTSAIAAAFGGGLPPGITG TNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHP NITPGTDSHDYVNSNLNRFNRNAAKNYRYCCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAVVNTKVFEMNGKKQALVQFE NEEEAAEALVCKHATSLGGSIIRISFSQLQTI* |
CDS seq | >AT1G43190.1 ATGGCGGAATCTTCCAAAGTCGTTCATGTTCGTAATGTTGGTCATGAGATTTCTGAAAATGATTTGCTTCAGCTTTTTCA ACCATTTGGTGTTATAACTAAGCTTGTGATGCTCAGGGCAAAGAATCAGGCTCTTCTCCAAATGCAAGATGTTTCTTCTG CAGTTAGTGCTCTTCAGTTTTTTACTAATGTTCAGCCAACTATAAGAGGTAGGAATGTGTATGTCCAATTCTCTTCTCAC CAAGAATTGACAACGATAGAGCAGAATATTCATGGAAGGGAAGATGAGCCGAACCGTATTCTCTTAGTCACAATCCATCA CATGCTGTATCCAATTACTGTTGACGTCCTGCATCAAGTTTTTTCTCCCTATGGATTTGTCGAGAAGCTCGTCACTTTCC AGAAGTCTGCTGGTTTTCAAGCTCTTATACAGTATCAGGTACAACAGTGTGCTGCCTCTGCTAGAACTGCTCTACAGGGT CGTAACATATATGACGGGTGTTGTCAGTTGGATATCCAGTTCTCAAACCTTGAGGAGCTGCAAGTAAATTACAACAATGA TCGATCTAGGGATTATACAAATCCAAACCTGCCTGCAGAACAAAAAGGCCGTTCATCGCATCCTTGCTATGGTGATACAG GAGTGGCATATCCTCAGATGGCAAACACATCAGCGATTGCAGCTGCCTTTGGAGGAGGCTTGCCTCCGGGTATAACCGGC ACAAATGATAGGTGTACAGTCCTTGTCTCTAACCTGAATGCAGATAGTATTGATGAAGATAAGCTATTCAATCTATTTTC TCTTTACGGGAACATTGTAAGGATTAAGCTTCTTCGGAACAAACCTGACCATGCCCTTGTCCAAATGGGCGATGGTTTCC AAGCTGAACTTGCAGTACATTTCCTCAAGGGAGCAATGCTGTTTGGTAAGCGGTTAGAAGTAAACTTCTCAAAGCATCCA AATATAACACCAGGCACAGACTCTCATGATTATGTAAACTCTAACCTGAACCGCTTCAACCGCAATGCTGCAAAGAATTA CCGCTATTGCTGCTCCCCTACAAAGATGATTCACTTATCGACTCTTCCTCAAGACGTGACAGAGGAGGAAGTGATGAACC ATGTCCAAGAACACGGTGCAGTAGTGAACACAAAAGTGTTTGAGATGAACGGGAAAAAGCAAGCTCTGGTACAGTTTGAG AACGAGGAGGAAGCTGCGGAAGCATTGGTATGCAAGCACGCGACTTCTCTAGGCGGATCAATTATCAGAATCTCCTTCTC CCAGCTACAGACGATTTAA |
Microexon DNA seq | TGGCATATCCTCAG |
Microexon Amino Acid seq | VAYPQ |
Microexon-tag DNA Seq | GAACAAAAAGGCCGTTCATCGCATCCTTGCTATGGTGATACAGGAGTGGCATATCCTCAGATGGCAAACACATCAGCGATTGCAGCTGCCTTTGGAGGAGGCTTGCCT |
Microexon-tag Amino Acid seq | EQKGRSSHPCYGDTGVAYPQMANTSAIAAAFGGGLP |
Transcript ID | AT1G43190.1 |
Gene ID | At.3762 |
Gene Name | PTB3 |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >AT1G43190.1 MAESSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAVSALQFFTNVQPTIRGRNVYVQFSSH QELTTIEQNIHGREDEPNRILLVTIHHMLYPITVDVLHQVFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQG RNIYDGCCQLDIQFSNLEELQVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTGVAYPQMANTSAIAAAFGGGLPPGITG TNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHP NITPGTDSHDYVNSNLNRFNRNAAKNYRYCCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAVVNTKVFEMNGKKQALVQFE NEEEAAEALVCKHATSLGGSIIRISFSQLQTI* |
CDS seq | >AT1G43190.1 ATGGCGGAATCTTCCAAAGTCGTTCATGTTCGTAATGTTGGTCATGAGATTTCTGAAAATGATTTGCTTCAGCTTTTTCA ACCATTTGGTGTTATAACTAAGCTTGTGATGCTCAGGGCAAAGAATCAGGCTCTTCTCCAAATGCAAGATGTTTCTTCTG CAGTTAGTGCTCTTCAGTTTTTTACTAATGTTCAGCCAACTATAAGAGGTAGGAATGTGTATGTCCAATTCTCTTCTCAC CAAGAATTGACAACGATAGAGCAGAATATTCATGGAAGGGAAGATGAGCCGAACCGTATTCTCTTAGTCACAATCCATCA CATGCTGTATCCAATTACTGTTGACGTCCTGCATCAAGTTTTTTCTCCCTATGGATTTGTCGAGAAGCTCGTCACTTTCC AGAAGTCTGCTGGTTTTCAAGCTCTTATACAGTATCAGGTACAACAGTGTGCTGCCTCTGCTAGAACTGCTCTACAGGGT CGTAACATATATGACGGGTGTTGTCAGTTGGATATCCAGTTCTCAAACCTTGAGGAGCTGCAAGTAAATTACAACAATGA TCGATCTAGGGATTATACAAATCCAAACCTGCCTGCAGAACAAAAAGGCCGTTCATCGCATCCTTGCTATGGTGATACAG GAGTGGCATATCCTCAGATGGCAAACACATCAGCGATTGCAGCTGCCTTTGGAGGAGGCTTGCCTCCGGGTATAACCGGC ACAAATGATAGGTGTACAGTCCTTGTCTCTAACCTGAATGCAGATAGTATTGATGAAGATAAGCTATTCAATCTATTTTC TCTTTACGGGAACATTGTAAGGATTAAGCTTCTTCGGAACAAACCTGACCATGCCCTTGTCCAAATGGGCGATGGTTTCC AAGCTGAACTTGCAGTACATTTCCTCAAGGGAGCAATGCTGTTTGGTAAGCGGTTAGAAGTAAACTTCTCAAAGCATCCA AATATAACACCAGGCACAGACTCTCATGATTATGTAAACTCTAACCTGAACCGCTTCAACCGCAATGCTGCAAAGAATTA CCGCTATTGCTGCTCCCCTACAAAGATGATTCACTTATCGACTCTTCCTCAAGACGTGACAGAGGAGGAAGTGATGAACC ATGTCCAAGAACACGGTGCAGTAGTGAACACAAAAGTGTTTGAGATGAACGGGAAAAAGCAAGCTCTGGTACAGTTTGAG AACGAGGAGGAAGCTGCGGAAGCATTGGTATGCAAGCACGCGACTTCTCTAGGCGGATCAATTATCAGAATCTCCTTCTC CCAGCTACAGACGATTTAA |