
Microexon ID | Zm_5:26616762-26616775:- |
Species | Zea mays | Coordinates | 5:26616762..26616775 |
Microexon Cluster ID | MEP38 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Myosin_head |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CAYTTYARTRMAACTGGRAARATATSTGGTGCYAADATTCAAACWTTTYTRCTTGARAAGTCWAGAGTWGTYCARYKTGCWGAWGGWGARAGRTCATAYCATATWTTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTTGCTTGAGAAG |
Microexon Amino Acid seq | FLLEK |
Microexon-tag DNA Seq | CATTTCAGTACCACTGGAAGAATATGTGGTGCCATGATTCAAACATTTTTGCTTGAGAAGTCCAGAGTTGTGCAATGTGCAGTTGGTGAACGATCGTACCATATATTT |
Microexon-tag Amino Acid Seq | HFSTTGRICGAMIQTFLLEKSRVVQCAVGERSYHIF |
Microexon-tag spanning region | 26616629-26616929 |
Microexon-tag prediction score | 0.9728 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Zm00001d013967_T002x |
Reference Transcript ID | Zm00001d013967_T002 |
Gene ID | Zm00001d013967 |
Gene Name | NA |
Transcript ID | Zm00001d013967_T002 |
Protein ID | Zm00001d013967_P002 |
Gene ID | Zm00001d013967 |
Gene Name | NA |
Pfam domain motif | Myosin_head |
Motif E-value | 8e-242 |
Motif start | 2 |
Motif end | 654 |
Protein seq | >Zm00001d013967_P002 MQLSYLSEPSVLYNLQYRYSQDMIYTKAGPVLVAVNPFKKVSLYGNEYIDAYRNKSMDSPHVYAIADAALCEMKRDEVNQ SIIISGESGAGKTETAKIAMQYLASLGGGSGIEYEILQTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSTTGRICGAMIQ TFLLEKSRVVQCAVGERSYHIFYQLCAGAPASLREKLNLKKVDEYKYLKQSCCYSIAGVDDAQMFRTVTEAMDIVHISKE DQENVFAMVSAVLWLGDVSFTVIDNENHVEIIADEASKMVAELLGCSIEDLNLALTKRHMKVNNENIVQKLTLAQATDTR DALAKSLYASLFEWLVEQINKSLSVGKRRTGRSISILDIYGFESFDKNSFEQFCINYANERLQQHFNRHLFKLEQEEYVE DGIDWAKVDFEDNQDCLSLFEKKPLGLLSLLDEESTFPNATDLTFANKLKQHLNSNSCFRGERDKGFAVRHYAGEVAYDT SGFLEKNRDLLHMDSIQLLAKCKTFLPKMFASKMLVQPDDSMSVPYRSSAADSQKLSVAMKFKGQLFQLMQRLESTTPHF IRCIKPNNLQLPAIYEQGLVLQQLKCCGVLEVVRISRSGYPTRMTHQKFARRYGFLLLEDVASQDPLSVSVAILHQFNIL PEMYQVGYTKLFFRTGQIGKLEDTRNRTLHGILRVQSCFRGHQARHHARERIRGVLALQTFIRGEKARQIYSSLLRKHRA AVILQSNLRCWLARRYFINVRKASVIIQSGIRGSLVRRCNGNIDLINVLREFESKQEAEGDQILIKASVLAELQRRILKA EATVREKEEENETLHQRLQQYENRWLEYEQKMKAMEEMWQKQMRSLQSSLSVAKKSLALHETPRMSDSSVDQSWESNGNH VSSGSQLVPRTGGREMSAGLSVIGRLAEEFEQRSQVFADDAKFLVEVKSGQADASLNPDMELRRLKHNFDSWKKDFSGRI RETKMILNKLGNGNESSPNSVKRKWWGRLNTSKFS* |
CDS seq | >Zm00001d013967_T002 ATGCAGCTAAGTTATCTAAGTGAACCATCAGTGCTGTACAATCTGCAGTACAGATACTCCCAGGACATGATTTATACTAA AGCAGGTCCAGTTTTGGTGGCTGTCAATCCTTTCAAGAAAGTTTCTCTGTATGGTAACGAGTACATTGATGCATATAGAA ATAAATCAATGGATAGTCCACATGTTTATGCAATAGCAGATGCAGCACTTTGTGAAATGAAAAGAGATGAAGTCAACCAA TCTATAATTATAAGTGGTGAGAGTGGCGCAGGAAAAACAGAAACTGCGAAAATTGCTATGCAGTATCTGGCTTCTCTTGG AGGTGGAAGTGGCATTGAATACGAAATTCTTCAGACCAATCCAATACTCGAGGCTTTTGGCAATGCAAAGACATTGAGAA ATGATAACTCAAGTCGTTTTGGAAAGCTTATCGAAATTCATTTCAGTACCACTGGAAGAATATGTGGTGCCATGATTCAA ACATTTTTGCTTGAGAAGTCCAGAGTTGTGCAATGTGCAGTTGGTGAACGATCGTACCATATATTTTATCAGCTGTGTGC TGGTGCACCTGCATCTCTAAGAGAGAAGTTGAATTTGAAAAAGGTAGATGAGTACAAATATCTTAAACAGAGCTGTTGCT ATTCAATTGCGGGCGTGGATGATGCCCAAATGTTTCGAACTGTGACGGAAGCTATGGACATCGTTCATATCAGCAAAGAG GACCAAGAGAATGTTTTTGCAATGGTCTCTGCTGTTCTATGGCTGGGGGATGTCTCGTTCACAGTAATTGACAATGAAAA TCATGTTGAAATCATTGCGGATGAAGCTTCAAAAATGGTTGCAGAACTTCTTGGCTGCAGTATTGAAGATCTCAATTTAG CTTTGACAAAGCGCCACATGAAAGTAAATAATGAAAACATTGTCCAGAAACTTACCCTTGCTCAGGCAACTGACACAAGA GATGCTCTGGCCAAATCATTGTATGCCAGTTTGTTTGAATGGCTTGTAGAACAAATTAATAAGTCTCTCTCAGTTGGCAA GCGTCGAACTGGGAGATCTATCAGTATTCTTGATATCTATGGCTTTGAATCATTTGATAAGAACAGTTTTGAACAGTTCT GCATCAATTATGCTAATGAAAGGTTGCAACAACATTTCAATCGTCATTTATTTAAGCTTGAGCAAGAGGAATATGTGGAG GATGGCATCGACTGGGCAAAGGTCGACTTTGAGGATAATCAAGATTGTTTGAGTCTATTTGAGAAAAAACCACTGGGGTT ATTGTCTCTGCTGGATGAGGAATCTACTTTCCCCAATGCCACAGATCTTACTTTTGCAAACAAGCTTAAGCAACATCTTA ACTCGAATTCTTGCTTCAGAGGAGAAAGAGACAAGGGATTTGCTGTCCGTCACTATGCAGGAGAGGTGGCTTATGATACT TCGGGTTTTCTGGAGAAGAATAGAGATTTATTGCACATGGACTCGATTCAGCTCCTTGCCAAATGCAAAACTTTTCTGCC AAAAATGTTTGCATCTAAGATGTTAGTTCAACCAGATGATTCTATGTCTGTTCCATATAGATCTAGTGCTGCTGATTCTC AAAAACTAAGTGTTGCCATGAAGTTCAAGGGTCAACTGTTCCAACTTATGCAAAGACTGGAAAGTACAACACCACACTTT ATTCGTTGCATTAAACCAAATAATTTACAACTTCCTGCAATTTATGAACAAGGACTTGTGCTTCAACAACTTAAATGCTG TGGGGTTCTCGAGGTTGTCCGGATTTCAAGATCTGGGTATCCAACAAGAATGACTCACCAGAAGTTTGCTCGGCGGTATG GCTTTCTTCTTCTTGAGGATGTTGCATCTCAAGATCCACTCAGTGTTTCAGTTGCAATTCTTCATCAGTTCAACATTTTA CCTGAGATGTATCAAGTTGGCTACACAAAGTTGTTCTTCCGAACTGGACAGATTGGCAAACTTGAAGATACTCGGAATCG TACTCTACACGGTATTCTAAGGGTTCAAAGCTGTTTCAGGGGGCATCAAGCCCGTCATCATGCGAGAGAACGAATAAGAG GAGTTTTGGCTCTTCAAACATTCATTCGTGGTGAGAAAGCACGGCAAATTTATTCCTCTTTGTTGAGGAAACATAGAGCA GCAGTTATTTTGCAGAGTAACTTGAGATGTTGGCTTGCAAGAAGGTATTTCATAAATGTCCGGAAGGCCTCAGTGATAAT ACAGTCTGGTATTCGTGGCAGTCTTGTTCGAAGATGTAATGGCAATATTGATCTAATAAACGTGCTAAGAGAGTTTGAAT CAAAACAGGAGGCAGAGGGTGACCAAATTTTGATCAAGGCATCAGTCCTGGCCGAGTTACAGAGGCGGATACTAAAAGCC GAGGCCACAGTACGTGAAAAGGAGGAAGAGAATGAGACGCTTCATCAGCGGCTTCAGCAATATGAAAACCGCTGGTTAGA GTACGAGCAGAAAATGAAAGCTATGGAGGAAATGTGGCAGAAGCAAATGCGTTCGTTGCAGTCGAGCCTTTCCGTAGCAA AGAAGAGTCTTGCTCTGCATGAGACACCTAGGATGTCGGACTCATCAGTGGATCAGAGCTGGGAAAGCAACGGGAACCAT GTCAGCAGCGGGTCTCAGCTGGTGCCACGCACTGGTGGGCGCGAAATGAGCGCTGGCCTGAGCGTCATCGGCCGCCTAGC AGAAGAATTCGAACAGCGGAGCCAGGTTTTTGCTGATGACGCCAAGTTCCTGGTTGAGGTCAAGTCCGGGCAGGCGGATG CCAGCCTAAACCCAGACATGGAGCTCCGGAGGCTGAAGCACAACTTCGACTCGTGGAAGAAAGATTTCAGTGGCCGAATA AGGGAGACAAAGATGATCCTGAACAAGCTCGGGAACGGCAACGAGTCATCGCCCAACTCCGTGAAGCGGAAATGGTGGGG CAGGCTGAACACCTCCAAGTTTTCGTGA |
Microexon DNA seq | TTTTGCTTGAGAAG |
Microexon Amino Acid seq | FLLEK |
Microexon-tag DNA Seq | CATTTCAGTACCACTGGAAGAATATGTGGTGCCATGATTCAAACATTTTTGCTTGAGAAGTCCAGAGTTGTGCAATGTGCAGTTGGTGAACGATCGTACCATATATTT |
Microexon-tag Amino Acid seq | HFSTTGRICGAMIQTFLLEKSRVVQCAVGERSYHIF |
Transcript ID | Zm00001d013967_T002 |
Gene ID | Zm.22484 |
Gene Name | NA |
Pfam domain motif | Myosin_head |
Motif E-value | 8e-242 |
Motif start | 2 |
Motif end | 654 |
Protein seq | >Zm00001d013967_T002 MQLSYLSEPSVLYNLQYRYSQDMIYTKAGPVLVAVNPFKKVSLYGNEYIDAYRNKSMDSPHVYAIADAALCEMKRDEVNQ SIIISGESGAGKTETAKIAMQYLASLGGGSGIEYEILQTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSTTGRICGAMIQ TFLLEKSRVVQCAVGERSYHIFYQLCAGAPASLREKLNLKKVDEYKYLKQSCCYSIAGVDDAQMFRTVTEAMDIVHISKE DQENVFAMVSAVLWLGDVSFTVIDNENHVEIIADEASKMVAELLGCSIEDLNLALTKRHMKVNNENIVQKLTLAQATDTR DALAKSLYASLFEWLVEQINKSLSVGKRRTGRSISILDIYGFESFDKNSFEQFCINYANERLQQHFNRHLFKLEQEEYVE DGIDWAKVDFEDNQDCLSLFEKKPLGLLSLLDEESTFPNATDLTFANKLKQHLNSNSCFRGERDKGFAVRHYAGEVAYDT SGFLEKNRDLLHMDSIQLLAKCKTFLPKMFASKMLVQPDDSMSVPYRSSAADSQKLSVAMKFKGQLFQLMQRLESTTPHF IRCIKPNNLQLPAIYEQGLVLQQLKCCGVLEVVRISRSGYPTRMTHQKFARRYGFLLLEDVASQDPLSVSVAILHQFNIL PEMYQVGYTKLFFRTGQIGKLEDTRNRTLHGILRVQSCFRGHQARHHARERIRGVLALQTFIRGEKARQIYSSLLRKHRA AVILQSNLRCWLARRYFINVRKASVIIQSGIRGSLVRRCNGNIDLINVLREFESKQEAEGDQILIKASVLAELQRRILKA EATVREKEEENETLHQRLQQYENRWLEYEQKMKAMEEMWQKQMRSLQSSLSVAKKSLALHETPRMSDSSVDQSWESNGNH VSSGSQLVPRTGGREMSAGLSVIGRLAEEFEQRSQVFADDAKFLVEVKSGQADASLNPDMELRRLKHNFDSWKKDFSGRI RETKMILNKLGNGNESSPNSVKRKWWGRLNTSKFS* |
CDS seq | >Zm00001d013967_T002 ATGCAGCTAAGTTATCTAAGTGAACCATCAGTGCTGTACAATCTGCAGTACAGATACTCCCAGGACATGATTTATACTAA AGCAGGTCCAGTTTTGGTGGCTGTCAATCCTTTCAAGAAAGTTTCTCTGTATGGTAACGAGTACATTGATGCATATAGAA ATAAATCAATGGATAGTCCACATGTTTATGCAATAGCAGATGCAGCACTTTGTGAAATGAAAAGAGATGAAGTCAACCAA TCTATAATTATAAGTGGTGAGAGTGGCGCAGGAAAAACAGAAACTGCGAAAATTGCTATGCAGTATCTGGCTTCTCTTGG AGGTGGAAGTGGCATTGAATACGAAATTCTTCAGACCAATCCAATACTCGAGGCTTTTGGCAATGCAAAGACATTGAGAA ATGATAACTCAAGTCGTTTTGGAAAGCTTATCGAAATTCATTTCAGTACCACTGGAAGAATATGTGGTGCCATGATTCAA ACATTTTTGCTTGAGAAGTCCAGAGTTGTGCAATGTGCAGTTGGTGAACGATCGTACCATATATTTTATCAGCTGTGTGC TGGTGCACCTGCATCTCTAAGAGAGAAGTTGAATTTGAAAAAGGTAGATGAGTACAAATATCTTAAACAGAGCTGTTGCT ATTCAATTGCGGGCGTGGATGATGCCCAAATGTTTCGAACTGTGACGGAAGCTATGGACATCGTTCATATCAGCAAAGAG GACCAAGAGAATGTTTTTGCAATGGTCTCTGCTGTTCTATGGCTGGGGGATGTCTCGTTCACAGTAATTGACAATGAAAA TCATGTTGAAATCATTGCGGATGAAGCTTCAAAAATGGTTGCAGAACTTCTTGGCTGCAGTATTGAAGATCTCAATTTAG CTTTGACAAAGCGCCACATGAAAGTAAATAATGAAAACATTGTCCAGAAACTTACCCTTGCTCAGGCAACTGACACAAGA GATGCTCTGGCCAAATCATTGTATGCCAGTTTGTTTGAATGGCTTGTAGAACAAATTAATAAGTCTCTCTCAGTTGGCAA GCGTCGAACTGGGAGATCTATCAGTATTCTTGATATCTATGGCTTTGAATCATTTGATAAGAACAGTTTTGAACAGTTCT GCATCAATTATGCTAATGAAAGGTTGCAACAACATTTCAATCGTCATTTATTTAAGCTTGAGCAAGAGGAATATGTGGAG GATGGCATCGACTGGGCAAAGGTCGACTTTGAGGATAATCAAGATTGTTTGAGTCTATTTGAGAAAAAACCACTGGGGTT ATTGTCTCTGCTGGATGAGGAATCTACTTTCCCCAATGCCACAGATCTTACTTTTGCAAACAAGCTTAAGCAACATCTTA ACTCGAATTCTTGCTTCAGAGGAGAAAGAGACAAGGGATTTGCTGTCCGTCACTATGCAGGAGAGGTGGCTTATGATACT TCGGGTTTTCTGGAGAAGAATAGAGATTTATTGCACATGGACTCGATTCAGCTCCTTGCCAAATGCAAAACTTTTCTGCC AAAAATGTTTGCATCTAAGATGTTAGTTCAACCAGATGATTCTATGTCTGTTCCATATAGATCTAGTGCTGCTGATTCTC AAAAACTAAGTGTTGCCATGAAGTTCAAGGGTCAACTGTTCCAACTTATGCAAAGACTGGAAAGTACAACACCACACTTT ATTCGTTGCATTAAACCAAATAATTTACAACTTCCTGCAATTTATGAACAAGGACTTGTGCTTCAACAACTTAAATGCTG TGGGGTTCTCGAGGTTGTCCGGATTTCAAGATCTGGGTATCCAACAAGAATGACTCACCAGAAGTTTGCTCGGCGGTATG GCTTTCTTCTTCTTGAGGATGTTGCATCTCAAGATCCACTCAGTGTTTCAGTTGCAATTCTTCATCAGTTCAACATTTTA CCTGAGATGTATCAAGTTGGCTACACAAAGTTGTTCTTCCGAACTGGACAGATTGGCAAACTTGAAGATACTCGGAATCG TACTCTACACGGTATTCTAAGGGTTCAAAGCTGTTTCAGGGGGCATCAAGCCCGTCATCATGCGAGAGAACGAATAAGAG GAGTTTTGGCTCTTCAAACATTCATTCGTGGTGAGAAAGCACGGCAAATTTATTCCTCTTTGTTGAGGAAACATAGAGCA GCAGTTATTTTGCAGAGTAACTTGAGATGTTGGCTTGCAAGAAGGTATTTCATAAATGTCCGGAAGGCCTCAGTGATAAT ACAGTCTGGTATTCGTGGCAGTCTTGTTCGAAGATGTAATGGCAATATTGATCTAATAAACGTGCTAAGAGAGTTTGAAT CAAAACAGGAGGCAGAGGGTGACCAAATTTTGATCAAGGCATCAGTCCTGGCCGAGTTACAGAGGCGGATACTAAAAGCC GAGGCCACAGTACGTGAAAAGGAGGAAGAGAATGAGACGCTTCATCAGCGGCTTCAGCAATATGAAAACCGCTGGTTAGA GTACGAGCAGAAAATGAAAGCTATGGAGGAAATGTGGCAGAAGCAAATGCGTTCGTTGCAGTCGAGCCTTTCCGTAGCAA AGAAGAGTCTTGCTCTGCATGAGACACCTAGGATGTCGGACTCATCAGTGGATCAGAGCTGGGAAAGCAACGGGAACCAT GTCAGCAGCGGGTCTCAGCTGGTGCCACGCACTGGTGGGCGCGAAATGAGCGCTGGCCTGAGCGTCATCGGCCGCCTAGC AGAAGAATTCGAACAGCGGAGCCAGGTTTTTGCTGATGACGCCAAGTTCCTGGTTGAGGTCAAGTCCGGGCAGGCGGATG CCAGCCTAAACCCAGACATGGAGCTCCGGAGGCTGAAGCACAACTTCGACTCGTGGAAGAAAGATTTCAGTGGCCGAATA AGGGAGACAAAGATGATCCTGAACAAGCTCGGGAACGGCAACGAGTCATCGCCCAACTCCGTGAAGCGGAAATGGTGGGG CAGGCTGAACACCTCCAAGTTTTCGTGA |