
Microexon ID | Zm_2:211772536-211772549:- |
Species | Zea mays | Coordinates | 2:211772536..211772549 |
Microexon Cluster ID | MEP38 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Myosin_head |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CAYTTYARTRMAACTGGRAARATATSTGGTGCYAADATTCAAACWTTTYTRCTTGARAAGTCWAGAGTWGTYCARYKTGCWGAWGGWGARAGRTCATAYCATATWTTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TCCTGCTTGAGAAG |
Microexon Amino Acid seq | FLLEK |
Microexon-tag DNA Seq | CACTTCTCTGAAACAGGGAAAATGTGTGGTGCTAAAATCCAGACCTTCCTGCTTGAGAAGTCGAGGGTGGTTCAAAGGGCACAAGGAGAGAGATCTTACCATATTTTC |
Microexon-tag Amino Acid Seq | HFSETGKMCGAKIQTFLLEKSRVVQRAQGERSYHIF |
Microexon-tag spanning region | 211772411-211772708 |
Microexon-tag prediction score | 0.9584 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Zm00001d006593_T001x |
Reference Transcript ID | Zm00001d006593_T001 |
Gene ID | Zm00001d006593 |
Gene Name | NA |
Transcript ID | Zm00001d006593_T001 |
Protein ID | Zm00001d006593_P001 |
Gene ID | Zm00001d006593 |
Gene Name | NA |
Pfam domain motif | Myosin_head |
Motif E-value | 4.3e-233 |
Motif start | 218 |
Motif end | 874 |
Protein seq | >Zm00001d006593_P001 MLSAAAVMAPAAATQKSSLEVLLETLKKRDEQPKDAPPTLPARPMCRGRLPTTRRPSLPAGFKLENGMVTVPATEAAAVD KKADAKEITGLEVKEEKAVKGCIFGTKRKFPSTQVLEESPYVDELHEERKRTTVCKEPPSISPATINMNGKPACTDIMDY VLQKKLRVWCSSSNAKWELGQIQSISGDDAEILLANGKVLTVSPEQLLPANPDILDGVDDLIQMSYLNEPSVLYNLQLRY SRDLIYTKAGPVLIAVNPLKEVALYGKSAIMQYKQKTNDDPHVYAVADLAFNEMLRDGINQSIIISGESGAGKTETAKIA MQYLSDLGGASGTESEVLQTNVILEALGNAKTSRNHNSSRFGKLIEIHFSETGKMCGAKIQTFLLEKSRVVQRAQGERSY HIFYQLCSGAPPLLKKKLSLKSASDYNYLKQSNCLKINGVDDSKKFTVLVDALDTIQISKEDQMKLFSMLAAVLWLGNIS FSVIDNENHVEVVSNEGLATAAKLLGCTANQLVSAVSTRKIRAGNDSIIKKLTLTQAIDARDALAKSIYANLFDWTVEQI NHTLGTGRQFTWRSISILDIYGFECFNKNGFEQFCINYANERLQQHFNRHLFKLQQEEYLEDGIDWTPMEFVDNTNCLSL FEKKPLGLLSLLDEESTFPRATDFSFANKLRQQLSGNSCFKGEKEGTFKICHYAGEVTYDTAGFLEKNRDPLHSESIQLL SSCKCELPKHFASVMVADSQNKSSLSWHSVMDTQKQSVVTKFKAQLFKLMQQLESTTPHFIRCIQPNSKQLPRLFEHDLI LHQLKCCGVLEVVRISRTCYPTRITHQQFAERYGLLLLRSIASQDPLSVSVAVLQQLNIPPEMYQVGYTKLFFRTGQVAA LENTKIQMLHGTLRIQKHFRGMHSRQGYQRLKKVAMNLQSFIRGERARIHFDNLVKRWRAAVLIQKYTRRRLAANMFNDQ LNHIILLQSVMRGCLARRKYKCLQNEKELKASHNIVQGETRKNNAESRICHGRITKAEAVLRDKEEENVMLKQQLEQYES KWSEYEAKMKSMEEAWKRQLSSLQLSLVAAKKSLAAADVATRTAQTDFTPTHAQYDSEDTLSTGTHTPEVTESRHRNHNH NPEAKVSAGNSDRRVNAVNHLAKEFEDRRQVFEDDAGFLVAVRSGQVGSNTNPDEELRKLKDRFETWKKDYKSRLKDTKV NLNKVGTGTHDDKSRKRWWGKKSSK* |
CDS seq | >Zm00001d006593_T001 ATGCTCTCTGCCGCCGCTGTGATGGCGCCGGCAGCAGCCACGCAGAAGAGCTCCCTTGAGGTCTTGCTTGAGACGCTAAA GAAGCGCGATGAGCAGCCCAAGGATGCGCCTCCAACATTGCCAGCCCGGCCCATGTGCCGTGGCCGTCTGCCCACCACCA GGCGGCCATCACTGCCTGCTGGCTTTAAGCTCGAGAATGGCATGGTAACAGTTCCTGCCACAGAAGCTGCAGCGGTTGAC AAGAAGGCAGATGCCAAGGAGATTACTGGGTTGGAGGTCAAGGAGGAAAAGGCAGTGAAAGGATGCATCTTTGGGACTAA GAGGAAGTTCCCTAGCACACAAGTGCTGGAGGAGTCGCCATATGTTGATGAACTTCATGAGGAGAGGAAGCGTACAACAG TTTGTAAAGAGCCCCCTTCTATTTCCCCGGCAACAATAAATATGAACGGGAAGCCAGCATGTACAGATATCATGGACTAT GTTCTCCAGAAGAAGCTACGAGTTTGGTGTTCTTCATCAAATGCAAAGTGGGAACTTGGACAGATCCAATCAATATCTGG AGATGATGCTGAAATACTCCTGGCTAATGGAAAAGTTTTGACGGTGTCACCAGAACAACTCTTGCCTGCCAACCCTGATA TCCTCGATGGAGTGGATGATTTAATCCAGATGAGTTACTTGAATGAACCTTCAGTTCTTTACAATCTGCAATTGCGATAT TCTCGCGATCTTATCTATACAAAGGCAGGACCTGTTCTGATTGCTGTCAATCCATTAAAAGAAGTTGCACTCTATGGGAA GTCTGCAATCATGCAATACAAGCAAAAGACCAACGATGACCCACATGTGTATGCAGTTGCTGATTTGGCATTTAATGAGA TGCTGCGAGATGGCATAAACCAATCTATAATAATAAGTGGTGAAAGTGGAGCAGGAAAAACCGAGACAGCTAAAATTGCA ATGCAATATTTGTCTGATCTCGGGGGTGCTAGTGGTACGGAGTCTGAGGTTCTTCAGACCAATGTTATTCTGGAAGCATT GGGGAATGCAAAAACATCACGAAACCATAACTCGAGCCGATTTGGCAAGCTTATTGAAATACACTTCTCTGAAACAGGGA AAATGTGTGGTGCTAAAATCCAGACCTTCCTGCTTGAGAAGTCGAGGGTGGTTCAAAGGGCACAAGGAGAGAGATCTTAC CATATTTTCTATCAACTATGTTCTGGAGCTCCTCCACTTCTCAAAAAAAAGTTGTCTCTAAAAAGCGCAAGTGACTACAA TTACTTGAAGCAGAGTAATTGCTTGAAAATCAATGGTGTTGACGATTCAAAAAAATTCACAGTGCTAGTGGATGCATTGG ATACAATTCAAATATCTAAGGAAGACCAAATGAAATTATTTTCTATGCTTGCAGCTGTCTTGTGGCTGGGAAACATATCA TTCTCTGTGATTGATAATGAAAACCATGTGGAAGTTGTCTCAAACGAAGGGTTGGCTACTGCTGCAAAGCTATTAGGCTG CACTGCAAATCAACTAGTGTCTGCCGTGTCCACTCGTAAGATTCGAGCTGGAAATGACAGTATTATTAAAAAGCTGACAT TAACTCAGGCCATTGACGCAAGAGATGCACTAGCAAAGTCAATATACGCCAATTTATTTGACTGGACCGTTGAGCAAATT AACCACACACTTGGAACGGGGAGGCAATTTACATGGAGATCCATAAGTATCTTGGATATTTATGGGTTTGAGTGTTTCAA TAAGAATGGTTTTGAGCAATTTTGTATAAATTATGCCAATGAGAGGCTGCAGCAGCACTTCAACCGACATCTTTTCAAAC TACAACAGGAGGAATACTTGGAAGACGGAATTGATTGGACCCCCATGGAATTTGTGGATAACACTAATTGCTTATCTCTT TTTGAAAAGAAACCTCTAGGGCTATTGTCATTATTGGATGAAGAGTCTACTTTCCCAAGGGCAACAGACTTTTCCTTTGC TAACAAGCTTAGGCAGCAATTAAGTGGTAACTCTTGCTTCAAAGGTGAAAAAGAAGGCACATTTAAGATTTGCCATTATG CAGGGGAGGTGACATATGATACAGCTGGGTTCCTGGAGAAGAACAGAGATCCACTGCACTCTGAATCAATCCAACTACTA TCATCATGTAAATGTGAACTTCCAAAACATTTTGCCTCTGTCATGGTTGCTGATTCTCAAAATAAATCAAGTCTGTCATG GCATTCAGTAATGGATACACAGAAACAAAGTGTTGTCACGAAATTTAAGGCTCAACTGTTCAAGCTGATGCAGCAGTTGG AGAGTACAACCCCACATTTTATTCGATGCATTCAACCAAATAGCAAACAACTTCCCAGGTTATTCGAGCATGATCTTATC TTGCACCAGCTTAAATGCTGTGGGGTGCTTGAAGTTGTCCGGATATCAAGAACATGCTATCCAACTAGGATCACTCACCA ACAGTTTGCTGAAAGATACGGGTTGCTTCTCTTGCGTTCGATTGCATCTCAAGACCCACTTAGTGTTTCAGTTGCTGTTT TGCAACAGTTGAACATTCCCCCTGAAATGTATCAAGTTGGCTACACAAAATTGTTTTTCCGTACAGGACAGGTTGCTGCA CTGGAAAATACTAAAATACAGATGCTTCACGGAACCCTCCGTATTCAGAAACACTTCCGGGGTATGCATTCTCGTCAGGG ATATCAACGACTCAAGAAAGTGGCAATGAATTTGCAATCATTTATACGTGGTGAAAGAGCAAGAATACACTTTGATAATC TTGTCAAGAGATGGAGGGCAGCTGTTCTAATACAGAAGTACACTAGGCGTCGACTTGCAGCTAACATGTTTAATGATCAA CTGAATCATATCATTCTTCTTCAGTCTGTGATGCGTGGGTGCCTGGCTAGAAGGAAATACAAGTGCCTGCAGAATGAAAA GGAGTTAAAGGCCAGTCACAACATAGTTCAAGGGGAAACAAGGAAGAATAATGCTGAGTCAAGAATATGCCATGGTCGGA TTACGAAAGCTGAGGCTGTATTGAGGGACAAGGAAGAAGAAAATGTGATGCTGAAACAGCAATTGGAACAGTATGAGAGT AAATGGTCAGAATATGAGGCCAAAATGAAATCTATGGAAGAGGCATGGAAGAGACAGCTCTCTTCTCTGCAGCTGAGCCT TGTTGCTGCTAAGAAGAGCCTAGCTGCTGCCGATGTGGCTACTAGAACTGCTCAGACTGATTTTACTCCAACACATGCCC AATACGACTCTGAAGACACGTTGTCCACTGGGACCCATACACCCGAAGTGACAGAGTCGAGGCACCGCAACCACAACCAC AACCCTGAAGCTAAAGTTTCAGCAGGAAACTCGGATAGGCGAGTAAACGCTGTGAACCACCTAGCGAAGGAGTTTGAAGA CAGACGGCAGGTGTTCGAAGACGACGCGGGCTTCCTTGTCGCAGTCAGGTCCGGCCAAGTTGGTTCAAATACGAACCCAG ACGAGGAACTCCGGAAGCTCAAGGACCGCTTTGAAACATGGAAAAAAGACTACAAATCTCGGCTGAAGGATACGAAGGTA AACCTTAATAAGGTTGGCACTGGCACCCATGATGATAAATCGCGGAAAAGATGGTGGGGAAAGAAGAGCTCCAAGTGA |
Microexon DNA seq | TCCTGCTTGAGAAG |
Microexon Amino Acid seq | FLLEK |
Microexon-tag DNA Seq | CACTTCTCTGAAACAGGGAAAATGTGTGGTGCTAAAATCCAGACCTTCCTGCTTGAGAAGTCGAGGGTGGTTCAAAGGGCACAAGGAGAGAGATCTTACCATATTTTC |
Microexon-tag Amino Acid seq | HFSETGKMCGAKIQTFLLEKSRVVQRAQGERSYHIF |
Transcript ID | Zm00001d006593_T001 |
Gene ID | Zm.12184 |
Gene Name | NA |
Pfam domain motif | Myosin_head |
Motif E-value | 4.3e-233 |
Motif start | 218 |
Motif end | 874 |
Protein seq | >Zm00001d006593_T001 MLSAAAVMAPAAATQKSSLEVLLETLKKRDEQPKDAPPTLPARPMCRGRLPTTRRPSLPAGFKLENGMVTVPATEAAAVD KKADAKEITGLEVKEEKAVKGCIFGTKRKFPSTQVLEESPYVDELHEERKRTTVCKEPPSISPATINMNGKPACTDIMDY VLQKKLRVWCSSSNAKWELGQIQSISGDDAEILLANGKVLTVSPEQLLPANPDILDGVDDLIQMSYLNEPSVLYNLQLRY SRDLIYTKAGPVLIAVNPLKEVALYGKSAIMQYKQKTNDDPHVYAVADLAFNEMLRDGINQSIIISGESGAGKTETAKIA MQYLSDLGGASGTESEVLQTNVILEALGNAKTSRNHNSSRFGKLIEIHFSETGKMCGAKIQTFLLEKSRVVQRAQGERSY HIFYQLCSGAPPLLKKKLSLKSASDYNYLKQSNCLKINGVDDSKKFTVLVDALDTIQISKEDQMKLFSMLAAVLWLGNIS FSVIDNENHVEVVSNEGLATAAKLLGCTANQLVSAVSTRKIRAGNDSIIKKLTLTQAIDARDALAKSIYANLFDWTVEQI NHTLGTGRQFTWRSISILDIYGFECFNKNGFEQFCINYANERLQQHFNRHLFKLQQEEYLEDGIDWTPMEFVDNTNCLSL FEKKPLGLLSLLDEESTFPRATDFSFANKLRQQLSGNSCFKGEKEGTFKICHYAGEVTYDTAGFLEKNRDPLHSESIQLL SSCKCELPKHFASVMVADSQNKSSLSWHSVMDTQKQSVVTKFKAQLFKLMQQLESTTPHFIRCIQPNSKQLPRLFEHDLI LHQLKCCGVLEVVRISRTCYPTRITHQQFAERYGLLLLRSIASQDPLSVSVAVLQQLNIPPEMYQVGYTKLFFRTGQVAA LENTKIQMLHGTLRIQKHFRGMHSRQGYQRLKKVAMNLQSFIRGERARIHFDNLVKRWRAAVLIQKYTRRRLAANMFNDQ LNHIILLQSVMRGCLARRKYKCLQNEKELKASHNIVQGETRKNNAESRICHGRITKAEAVLRDKEEENVMLKQQLEQYES KWSEYEAKMKSMEEAWKRQLSSLQLSLVAAKKSLAAADVATRTAQTDFTPTHAQYDSEDTLSTGTHTPEVTESRHRNHNH NPEAKVSAGNSDRRVNAVNHLAKEFEDRRQVFEDDAGFLVAVRSGQVGSNTNPDEELRKLKDRFETWKKDYKSRLKDTKV NLNKVGTGTHDDKSRKRWWGKKSSK* |
CDS seq | >Zm00001d006593_T001 ATGCTCTCTGCCGCCGCTGTGATGGCGCCGGCAGCAGCCACGCAGAAGAGCTCCCTTGAGGTCTTGCTTGAGACGCTAAA GAAGCGCGATGAGCAGCCCAAGGATGCGCCTCCAACATTGCCAGCCCGGCCCATGTGCCGTGGCCGTCTGCCCACCACCA GGCGGCCATCACTGCCTGCTGGCTTTAAGCTCGAGAATGGCATGGTAACAGTTCCTGCCACAGAAGCTGCAGCGGTTGAC AAGAAGGCAGATGCCAAGGAGATTACTGGGTTGGAGGTCAAGGAGGAAAAGGCAGTGAAAGGATGCATCTTTGGGACTAA GAGGAAGTTCCCTAGCACACAAGTGCTGGAGGAGTCGCCATATGTTGATGAACTTCATGAGGAGAGGAAGCGTACAACAG TTTGTAAAGAGCCCCCTTCTATTTCCCCGGCAACAATAAATATGAACGGGAAGCCAGCATGTACAGATATCATGGACTAT GTTCTCCAGAAGAAGCTACGAGTTTGGTGTTCTTCATCAAATGCAAAGTGGGAACTTGGACAGATCCAATCAATATCTGG AGATGATGCTGAAATACTCCTGGCTAATGGAAAAGTTTTGACGGTGTCACCAGAACAACTCTTGCCTGCCAACCCTGATA TCCTCGATGGAGTGGATGATTTAATCCAGATGAGTTACTTGAATGAACCTTCAGTTCTTTACAATCTGCAATTGCGATAT TCTCGCGATCTTATCTATACAAAGGCAGGACCTGTTCTGATTGCTGTCAATCCATTAAAAGAAGTTGCACTCTATGGGAA GTCTGCAATCATGCAATACAAGCAAAAGACCAACGATGACCCACATGTGTATGCAGTTGCTGATTTGGCATTTAATGAGA TGCTGCGAGATGGCATAAACCAATCTATAATAATAAGTGGTGAAAGTGGAGCAGGAAAAACCGAGACAGCTAAAATTGCA ATGCAATATTTGTCTGATCTCGGGGGTGCTAGTGGTACGGAGTCTGAGGTTCTTCAGACCAATGTTATTCTGGAAGCATT GGGGAATGCAAAAACATCACGAAACCATAACTCGAGCCGATTTGGCAAGCTTATTGAAATACACTTCTCTGAAACAGGGA AAATGTGTGGTGCTAAAATCCAGACCTTCCTGCTTGAGAAGTCGAGGGTGGTTCAAAGGGCACAAGGAGAGAGATCTTAC CATATTTTCTATCAACTATGTTCTGGAGCTCCTCCACTTCTCAAAAAAAAGTTGTCTCTAAAAAGCGCAAGTGACTACAA TTACTTGAAGCAGAGTAATTGCTTGAAAATCAATGGTGTTGACGATTCAAAAAAATTCACAGTGCTAGTGGATGCATTGG ATACAATTCAAATATCTAAGGAAGACCAAATGAAATTATTTTCTATGCTTGCAGCTGTCTTGTGGCTGGGAAACATATCA TTCTCTGTGATTGATAATGAAAACCATGTGGAAGTTGTCTCAAACGAAGGGTTGGCTACTGCTGCAAAGCTATTAGGCTG CACTGCAAATCAACTAGTGTCTGCCGTGTCCACTCGTAAGATTCGAGCTGGAAATGACAGTATTATTAAAAAGCTGACAT TAACTCAGGCCATTGACGCAAGAGATGCACTAGCAAAGTCAATATACGCCAATTTATTTGACTGGACCGTTGAGCAAATT AACCACACACTTGGAACGGGGAGGCAATTTACATGGAGATCCATAAGTATCTTGGATATTTATGGGTTTGAGTGTTTCAA TAAGAATGGTTTTGAGCAATTTTGTATAAATTATGCCAATGAGAGGCTGCAGCAGCACTTCAACCGACATCTTTTCAAAC TACAACAGGAGGAATACTTGGAAGACGGAATTGATTGGACCCCCATGGAATTTGTGGATAACACTAATTGCTTATCTCTT TTTGAAAAGAAACCTCTAGGGCTATTGTCATTATTGGATGAAGAGTCTACTTTCCCAAGGGCAACAGACTTTTCCTTTGC TAACAAGCTTAGGCAGCAATTAAGTGGTAACTCTTGCTTCAAAGGTGAAAAAGAAGGCACATTTAAGATTTGCCATTATG CAGGGGAGGTGACATATGATACAGCTGGGTTCCTGGAGAAGAACAGAGATCCACTGCACTCTGAATCAATCCAACTACTA TCATCATGTAAATGTGAACTTCCAAAACATTTTGCCTCTGTCATGGTTGCTGATTCTCAAAATAAATCAAGTCTGTCATG GCATTCAGTAATGGATACACAGAAACAAAGTGTTGTCACGAAATTTAAGGCTCAACTGTTCAAGCTGATGCAGCAGTTGG AGAGTACAACCCCACATTTTATTCGATGCATTCAACCAAATAGCAAACAACTTCCCAGGTTATTCGAGCATGATCTTATC TTGCACCAGCTTAAATGCTGTGGGGTGCTTGAAGTTGTCCGGATATCAAGAACATGCTATCCAACTAGGATCACTCACCA ACAGTTTGCTGAAAGATACGGGTTGCTTCTCTTGCGTTCGATTGCATCTCAAGACCCACTTAGTGTTTCAGTTGCTGTTT TGCAACAGTTGAACATTCCCCCTGAAATGTATCAAGTTGGCTACACAAAATTGTTTTTCCGTACAGGACAGGTTGCTGCA CTGGAAAATACTAAAATACAGATGCTTCACGGAACCCTCCGTATTCAGAAACACTTCCGGGGTATGCATTCTCGTCAGGG ATATCAACGACTCAAGAAAGTGGCAATGAATTTGCAATCATTTATACGTGGTGAAAGAGCAAGAATACACTTTGATAATC TTGTCAAGAGATGGAGGGCAGCTGTTCTAATACAGAAGTACACTAGGCGTCGACTTGCAGCTAACATGTTTAATGATCAA CTGAATCATATCATTCTTCTTCAGTCTGTGATGCGTGGGTGCCTGGCTAGAAGGAAATACAAGTGCCTGCAGAATGAAAA GGAGTTAAAGGCCAGTCACAACATAGTTCAAGGGGAAACAAGGAAGAATAATGCTGAGTCAAGAATATGCCATGGTCGGA TTACGAAAGCTGAGGCTGTATTGAGGGACAAGGAAGAAGAAAATGTGATGCTGAAACAGCAATTGGAACAGTATGAGAGT AAATGGTCAGAATATGAGGCCAAAATGAAATCTATGGAAGAGGCATGGAAGAGACAGCTCTCTTCTCTGCAGCTGAGCCT TGTTGCTGCTAAGAAGAGCCTAGCTGCTGCCGATGTGGCTACTAGAACTGCTCAGACTGATTTTACTCCAACACATGCCC AATACGACTCTGAAGACACGTTGTCCACTGGGACCCATACACCCGAAGTGACAGAGTCGAGGCACCGCAACCACAACCAC AACCCTGAAGCTAAAGTTTCAGCAGGAAACTCGGATAGGCGAGTAAACGCTGTGAACCACCTAGCGAAGGAGTTTGAAGA CAGACGGCAGGTGTTCGAAGACGACGCGGGCTTCCTTGTCGCAGTCAGGTCCGGCCAAGTTGGTTCAAATACGAACCCAG ACGAGGAACTCCGGAAGCTCAAGGACCGCTTTGAAACATGGAAAAAAGACTACAAATCTCGGCTGAAGGATACGAAGGTA AACCTTAATAAGGTTGGCACTGGCACCCATGATGATAAATCGCGGAAAAGATGGTGGGGAAAGAAGAGCTCCAAGTGA |