
Microexon ID | Zm_1:232694868-232694881:- |
Species | Zea mays | Coordinates | 1:232694868..232694881 |
Microexon Cluster ID | MEP38 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Myosin_head |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CAYTTYARTRMAACTGGRAARATATSTGGTGCYAADATTCAAACWTTTYTRCTTGARAAGTCWAGAGTWGTYCARYKTGCWGAWGGWGARAGRTCATAYCATATWTTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTTGCTTGAGAAG |
Microexon Amino Acid seq | FLLEK |
Microexon-tag DNA Seq | CATTTCAGTACCACTGGAAGAATATGTGGTGCCATGATTCAAACATTTTTGCTTGAGAAGTCCAGAGTTGTGCAATGTGCAGTTGGTGAGCGATCATACCATATATTT |
Microexon-tag Amino Acid Seq | HFSTTGRICGAMIQTFLLEKSRVVQCAVGERSYHIF |
Microexon-tag spanning region | 232694729-232695034 |
Microexon-tag prediction score | 0.9754 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Zm00001d032637_T001x |
Reference Transcript ID | Zm00001d032637_T001 |
Gene ID | Zm00001d032637 |
Gene Name | NA |
Transcript ID | Zm00001d032637_T001 |
Protein ID | Zm00001d032637_P001 |
Gene ID | Zm00001d032637 |
Gene Name | NA |
Pfam domain motif | Myosin_head |
Motif E-value | 6.4e-115 |
Motif start | 193 |
Motif end | 497 |
Protein seq | >Zm00001d032637_P001 MASVEVRKSRALRARSGPSKLQPARSMPLDYRYSAGASPANGAGGGPDANGVGRRAAAAEAENGGEVVVRLEGGDADSPY SSTAVTAAEEEEVGERGGGGDEVDSAATATPRRLSPRAAASPTEGDARWGDTSSYGAKKKHRVFCQLPNGDWALCTVITT SGDESVVKVSEGKVLRLKTECLQPANPEILDGVDDLMQLSYLSEPSVLYNLQYRYSKDMIYTKAGPVLVAVNPFKKVSLY GNEYIDAYRNKSMDSPHVYAIADAALCEMKRDEVNQSIIISGESGAGKTETAKIAMQYLASLGGGSGIEYEILQTNPILE AFGNAKTLRNDNSSRFGKLIEIHFSTTGRICGAMIQTFLLEKSRVVQCAVGERSYHIFYQLCAGAPASLKEKLNLKKVDG YKYLKQSCCYSIAGVDDAQMFRTVTQAMNIVHISKEDQESVFAMVSAVLWLGDVSFTVIDNENHVEIIVDEASKTVSELL GCSIEDLNLALSKRHMKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYVEDGIDWAKVDFEDNQDCLSLFEKKPLGLLS LLDEESTFPNATDLTFANKLKQHLDSNSCFRGERGKAFAVRHYAGEVAYDTSGFLEKNRDLLHMDSIQLLAKCKTSLPKM FASKMLVQSDNSMSVPYRSSAADSQKLSVAMKFKGQLFQLMQRLESTTPHFIRCIKPNNLQLPAIYEQGLVLQQLKCCGV LEVVRISRSGYPTRMTHQKFARRYGFLLEDVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGNLEDTRNRTLH VIRGENARQIYSSLLRKHRAAVVLQRNVRCWLARRYFINVRKASVIIQSGIRGSLVRRCNGNIDLINVLREFESKQEAHG DQILIKASVLAELQRRILKAEATVREKDEENEMLHQRLQQYENRWLEYEQKMKAMEEMWQKQMRSLQSSLSVAKKSLVLD ETPRMSDSSVDQSWESNGNHHVSSGSQLVPHTGGREMNAGLSVISRLAEEFEQRSQVFADDAKFLVEVKSGQADASLNPD MELRRLKQNFDSWKKDFSGRMRETKVILNKLGNGNESSPNSVKRKWWGRLNTSKFS* |
CDS seq | >Zm00001d032637_T001 ATGGCGTCGGTGGAGGTGCGCAAGTCCAGGGCCCTGCGGGCGCGCAGCGGGCCCAGCAAGCTGCAGCCGGCGCGGTCGAT GCCGCTCGACTACAGGTACTCGGCCGGGGCGTCGCCGGCGAACGGCGCCGGCGGCGGGCCGGACGCGAACGGCGTCGGGC GGCGGGCGGCTGCGGCGGAGGCGGAGAACGGAGGGGAGGTGGTGGTGCGGTTGGAGGGGGGCGATGCGGACTCCCCGTAC AGCTCCACGGCGGTCACAGCGGCGGAGGAGGAGGAAGTGGGGGAGAGAGGTGGAGGAGGAGACGAGGTGGATTCAGCGGC CACGGCGACGCCGAGGCGGTTGTCGCCGAGGGCAGCAGCGAGCCCCACGGAAGGCGACGCCCGGTGGGGTGACACCAGCT CGTACGGCGCTAAGAAGAAGCATAGAGTTTTTTGTCAGCTTCCGAATGGCGATTGGGCATTATGCACAGTAATTACAACC TCTGGTGATGAGTCGGTTGTAAAGGTTTCTGAAGGGAAGGTACTGAGATTGAAAACCGAGTGTCTACAACCTGCAAATCC TGAAATTCTTGATGGAGTGGATGATCTTATGCAGCTAAGTTATCTAAGTGAACCATCAGTACTGTACAATCTGCAGTACA GATACTCCAAGGATATGATTTATACTAAAGCAGGTCCAGTTTTGGTGGCTGTCAATCCTTTCAAGAAAGTTTCACTGTAT GGTAACGAGTACATCGATGCATATAGAAATAAATCAATGGATAGTCCACATGTTTATGCAATAGCAGATGCAGCACTTTG TGAAATGAAAAGAGATGAAGTCAACCAATCTATAATTATAAGTGGTGAGAGTGGAGCAGGAAAAACAGAAACCGCAAAAA TTGCTATGCAGTACCTGGCTTCCCTTGGAGGTGGAAGTGGCATTGAATACGAAATTCTTCAGACAAATCCAATACTCGAG GCTTTTGGCAATGCAAAGACATTGAGAAATGATAACTCAAGTCGTTTTGGAAAGCTTATAGAAATTCATTTCAGTACCAC TGGAAGAATATGTGGTGCCATGATTCAAACATTTTTGCTTGAGAAGTCCAGAGTTGTGCAATGTGCAGTTGGTGAGCGAT CATACCATATATTTTATCAGCTGTGCGCTGGTGCACCTGCCTCTCTAAAAGAGAAGTTGAATTTGAAAAAGGTGGATGGA TACAAATATCTTAAGCAGAGCTGTTGCTATTCAATTGCGGGTGTGGATGATGCCCAAATGTTTCGAACTGTGACGCAAGC TATGAACATTGTTCATATCAGCAAAGAGGACCAAGAGAGTGTTTTTGCAATGGTCTCTGCTGTTCTTTGGCTGGGGGATG TCTCGTTCACAGTAATTGACAATGAAAATCATGTTGAAATCATAGTAGATGAAGCTTCGAAAACGGTTTCAGAACTTCTT GGCTGCAGTATTGAAGATCTCAATTTAGCTTTATCAAAGCGCCACATGAAAAAGAACAGTTTTGAACAGTTCTGCATTAA TTATGCTAATGAAAGGTTGCAGCAACATTTCAATCGTCATTTGTTTAAGCTTGAGCAAGAGGAATATGTGGAGGATGGCA TCGACTGGGCAAAGGTTGACTTCGAGGATAATCAGGACTGTTTGAGCCTCTTTGAGAAAAAACCACTGGGACTATTGTCT CTGCTGGATGAGGAATCTACTTTCCCGAATGCCACAGATCTTACTTTTGCAAACAAGCTTAAGCAACATCTTGACTCGAA TTCTTGCTTCAGAGGAGAAAGAGGCAAGGCATTTGCTGTCCGTCACTATGCAGGAGAGGTGGCTTATGATACTTCGGGTT TTCTGGAGAAGAATAGAGATTTATTGCACATGGACTCGATTCAGCTCCTTGCCAAATGCAAAACTTCTCTGCCAAAAATG TTTGCATCGAAGATGCTAGTTCAATCAGATAATTCTATGTCTGTTCCATATAGATCTAGTGCTGCTGATTCTCAAAAACT AAGTGTTGCCATGAAGTTCAAGGGTCAACTGTTCCAACTTATGCAAAGACTGGAAAGTACAACGCCACACTTTATTCGTT GCATTAAACCAAACAATTTACAACTTCCTGCAATTTATGAACAAGGACTTGTGCTTCAACAACTTAAATGTTGTGGGGTT CTTGAGGTTGTCCGGATTTCAAGATCTGGGTATCCAACAAGAATGACTCACCAGAAGTTTGCTCGGCGGTATGGTTTTCT TCTTGAGGATGTTGCATCTCAAGATCCACTCAGTGTTTCAGTTGCAATTCTTCATCAGTTCAACATTTTACCTGAGATGT ATCAAGTTGGCTACACAAAGTTGTTCTTCCGAACTGGTCAGATTGGCAACCTTGAAGATACTCGGAATCGTACTCTGCAT GTCATTCGTGGTGAGAATGCACGGCAAATTTACTCCTCTTTGTTGAGGAAACATAGAGCCGCAGTTGTTTTGCAGAGAAA TGTGAGATGTTGGCTTGCAAGAAGGTATTTCATAAATGTCCGGAAGGCCTCAGTGATAATACAGTCTGGTATTCGTGGCA GTCTTGTTCGAAGATGTAATGGCAATATTGATCTAATAAATGTGCTAAGAGAGTTTGAATCAAAACAGGAGGCACATGGT GACCAAATTTTGATCAAGGCCTCAGTCCTGGCTGAGTTACAGAGGCGGATACTAAAAGCCGAGGCCACAGTACGTGAAAA GGATGAAGAGAACGAGATGCTTCATCAGCGGCTTCAGCAATATGAAAACCGCTGGTTAGAGTACGAACAGAAAATGAAAG CTATGGAGGAAATGTGGCAGAAGCAAATGCGTTCGCTGCAATCGAGCCTTTCCGTAGCAAAGAAGAGCCTTGTTTTGGAT GAAACGCCTAGGATGTCGGACTCATCAGTGGATCAGAGCTGGGAAAGCAATGGGAACCACCATGTCAGCAGCGGTTCTCA GCTGGTGCCACACACTGGTGGACGTGAAATGAACGCTGGCCTCAGCGTCATCAGCCGCCTGGCAGAAGAATTCGAGCAGC GGAGCCAGGTTTTCGCTGATGACGCCAAGTTCCTGGTCGAGGTCAAGTCTGGGCAGGCGGACGCCAGCCTAAACCCAGAC ATGGAGCTCCGGAGGTTGAAGCAGAACTTCGACTCGTGGAAGAAAGATTTCAGTGGACGGATGAGGGAGACGAAGGTGAT CCTGAACAAGCTCGGCAATGGCAACGAGTCATCGCCCAACTCTGTGAAGCGGAAGTGGTGGGGCAGGCTGAACACCTCCA AGTTTTCGTGA |
Microexon DNA seq | TTTTGCTTGAGAAG |
Microexon Amino Acid seq | FLLEK |
Microexon-tag DNA Seq | CATTTCAGTACCACTGGAAGAATATGTGGTGCCATGATTCAAACATTTTTGCTTGAGAAGTCCAGAGTTGTGCAATGTGCAGTTGGTGAGCGATCATACCATATATTT |
Microexon-tag Amino Acid seq | HFSTTGRICGAMIQTFLLEKSRVVQCAVGERSYHIF |
Transcript ID | Zm00001d032637_T004 |
Gene ID | Zm.4033 |
Gene Name | NA |
Pfam domain motif | Myosin_head |
Motif E-value | 3.3e-242 |
Motif start | 193 |
Motif end | 849 |
Protein seq | >Zm00001d032637_T004 MASVEVRKSRALRARSGPSKLQPARSMPLDYRYSAGASPANGAGGGPDANGVGRRAAAAEAENGGEVVVRLEGGDADSPY SSTAVTAAEEEEVGERGGGGDEVDSAATATPRRLSPRAAASPTEGDARWGDTSSYGAKKKHRVFCQLPNGDWALCTVITT SGDESVVKVSEGKVLRLKTECLQPANPEILDGVDDLMQLSYLSEPSVLYNLQYRYSKDMIYTKAGPVLVAVNPFKKVSLY GNEYIDAYRNKSMDSPHVYAIADAALCEMKRDEVNQSIIISGESGAGKTETAKIAMQYLASLGGGSGIEYEILQTNPILE AFGNAKTLRNDNSSRFGKLIEIHFSTTGRICGAMIQTFLLEKSRVVQCAVGERSYHIFYQLCAGAPASLKEKLNLKKVDG YKYLKQSCCYSIAGVDDAQMFRTVTQAMNIVHISKEDQESVFAMVSAVLWLGDVSFTVIDNENHVEIIVDEASKTVSELL GCSIEDLNLALSKRHMKVNNENIVQKLTLAQATDTRDALAKSVYASLFEWLVEQINKSLSVGKRRTGRSISILDIYGFES FDKNSFEQFCINYANERLQQHFNRHLFKLEQEEYVEDGIDWAKVDFEDNQDCLSLFEKKPLGLLSLLDEESTFPNATDLT FANKLKQHLDSNSCFRGERGKAFAVRHYAGEVAYDTSGFLEKNRDLLHMDSIQLLAKCKTSLPKMFASKMLVQSDNSMSV PYRSSAADSQKLSVAMKFKGQLFQLMQRLESTTPHFIRCIKPNNLQLPAIYEQGLVLQQLKCCGVLEVVRISRSGYPTRM THQKFARRYGFLLEDVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGNLEDTRNRTLHGILRVQSCFRGHQAR HHARERTRGVLTLQSFIRGENARQIYSSLLRKHRAAVVLQRNVRCWLARRYFINVRKASVIIQSGIRGSLVRRCNGNIDL INVLREFESKQEAHGDQILIKASVLAELQRRILKAEATVREKDEENEMLHQRLQQYENRWLEYEQKMKAMEEMWQKQMRS LQSSLSVAKKSLVLDETPRMSDSSVDQSWESNGNHHVSSGSQLVPHTGGREMNAGLSVISRLAEEFEQRSQVFADDAKFL VEVKSGQADASLNPDMELRRLKQNFDSWKKDFSGRMRETKVILNKLGNGNESSPNSVKRKWWGRLNTSKFS* |
CDS seq | >Zm00001d032637_T004 ATGGCGTCGGTGGAGGTGCGCAAGTCCAGGGCCCTGCGGGCGCGCAGCGGGCCCAGCAAGCTGCAGCCGGCGCGGTCGAT GCCGCTCGACTACAGGTACTCGGCCGGGGCGTCGCCGGCGAACGGCGCCGGCGGCGGGCCGGACGCGAACGGCGTCGGGC GGCGGGCGGCTGCGGCGGAGGCGGAGAACGGAGGGGAGGTGGTGGTGCGGTTGGAGGGGGGCGATGCGGACTCCCCGTAC AGCTCCACGGCGGTCACAGCGGCGGAGGAGGAGGAAGTGGGGGAGAGAGGTGGAGGAGGAGACGAGGTGGATTCAGCGGC CACGGCGACGCCGAGGCGGTTGTCGCCGAGGGCAGCAGCGAGCCCCACGGAAGGCGACGCCCGGTGGGGTGACACCAGCT CGTACGGCGCTAAGAAGAAGCATAGAGTTTTTTGTCAGCTTCCGAATGGCGATTGGGCATTATGCACAGTAATTACAACC TCTGGTGATGAGTCGGTTGTAAAGGTTTCTGAAGGGAAGGTACTGAGATTGAAAACCGAGTGTCTACAACCTGCAAATCC TGAAATTCTTGATGGAGTGGATGATCTTATGCAGCTAAGTTATCTAAGTGAACCATCAGTACTGTACAATCTGCAGTACA GATACTCCAAGGATATGATTTATACTAAAGCAGGTCCAGTTTTGGTGGCTGTCAATCCTTTCAAGAAAGTTTCACTGTAT GGTAACGAGTACATCGATGCATATAGAAATAAATCAATGGATAGTCCACATGTTTATGCAATAGCAGATGCAGCACTTTG TGAAATGAAAAGAGATGAAGTCAACCAATCTATAATTATAAGTGGTGAGAGTGGAGCAGGAAAAACAGAAACCGCAAAAA TTGCTATGCAGTACCTGGCTTCCCTTGGAGGTGGAAGTGGCATTGAATACGAAATTCTTCAGACAAATCCAATACTCGAG GCTTTTGGCAATGCAAAGACATTGAGAAATGATAACTCAAGTCGTTTTGGAAAGCTTATAGAAATTCATTTCAGTACCAC TGGAAGAATATGTGGTGCCATGATTCAAACATTTTTGCTTGAGAAGTCCAGAGTTGTGCAATGTGCAGTTGGTGAGCGAT CATACCATATATTTTATCAGCTGTGCGCTGGTGCACCTGCCTCTCTAAAAGAGAAGTTGAATTTGAAAAAGGTGGATGGA TACAAATATCTTAAGCAGAGCTGTTGCTATTCAATTGCGGGTGTGGATGATGCCCAAATGTTTCGAACTGTGACGCAAGC TATGAACATTGTTCATATCAGCAAAGAGGACCAAGAGAGTGTTTTTGCAATGGTCTCTGCTGTTCTTTGGCTGGGGGATG TCTCGTTCACAGTAATTGACAATGAAAATCATGTTGAAATCATAGTAGATGAAGCTTCGAAAACGGTTTCAGAACTTCTT GGCTGCAGTATTGAAGATCTCAATTTAGCTTTATCAAAGCGCCACATGAAAGTTAATAATGAAAACATTGTCCAGAAACT TACCCTTGCTCAGGCAACTGACACAAGAGATGCTCTGGCCAAATCAGTGTATGCCAGTTTGTTTGAGTGGCTTGTAGAAC AAATTAATAAGTCTCTCTCAGTTGGCAAGCGTCGAACTGGGAGATCTATCAGTATTCTTGATATCTATGGCTTTGAATCA TTTGATAAGAACAGTTTTGAACAGTTCTGCATTAATTATGCTAATGAAAGGTTGCAGCAACATTTCAATCGTCATTTGTT TAAGCTTGAGCAAGAGGAATATGTGGAGGATGGCATCGACTGGGCAAAGGTTGACTTCGAGGATAATCAGGACTGTTTGA GCCTCTTTGAGAAAAAACCACTGGGACTATTGTCTCTGCTGGATGAGGAATCTACTTTCCCGAATGCCACAGATCTTACT TTTGCAAACAAGCTTAAGCAACATCTTGACTCGAATTCTTGCTTCAGAGGAGAAAGAGGCAAGGCATTTGCTGTCCGTCA CTATGCAGGAGAGGTGGCTTATGATACTTCGGGTTTTCTGGAGAAGAATAGAGATTTATTGCACATGGACTCGATTCAGC TCCTTGCCAAATGCAAAACTTCTCTGCCAAAAATGTTTGCATCGAAGATGCTAGTTCAATCAGATAATTCTATGTCTGTT CCATATAGATCTAGTGCTGCTGATTCTCAAAAACTAAGTGTTGCCATGAAGTTCAAGGGTCAACTGTTCCAACTTATGCA AAGACTGGAAAGTACAACGCCACACTTTATTCGTTGCATTAAACCAAACAATTTACAACTTCCTGCAATTTATGAACAAG GACTTGTGCTTCAACAACTTAAATGTTGTGGGGTTCTTGAGGTTGTCCGGATTTCAAGATCTGGGTATCCAACAAGAATG ACTCACCAGAAGTTTGCTCGGCGGTATGGTTTTCTTCTTGAGGATGTTGCATCTCAAGATCCACTCAGTGTTTCAGTTGC AATTCTTCATCAGTTCAACATTTTACCTGAGATGTATCAAGTTGGCTACACAAAGTTGTTCTTCCGAACTGGTCAGATTG GCAACCTTGAAGATACTCGGAATCGTACTCTGCATGGTATTTTAAGGGTTCAAAGCTGTTTCAGGGGGCATCAAGCCCGT CATCATGCAAGAGAACGAACAAGAGGAGTTTTGACTCTTCAATCATTCATTCGTGGTGAGAATGCACGGCAAATTTACTC CTCTTTGTTGAGGAAACATAGAGCCGCAGTTGTTTTGCAGAGAAATGTGAGATGTTGGCTTGCAAGAAGGTATTTCATAA ATGTCCGGAAGGCCTCAGTGATAATACAGTCTGGTATTCGTGGCAGTCTTGTTCGAAGATGTAATGGCAATATTGATCTA ATAAATGTGCTAAGAGAGTTTGAATCAAAACAGGAGGCACATGGTGACCAAATTTTGATCAAGGCCTCAGTCCTGGCTGA GTTACAGAGGCGGATACTAAAAGCCGAGGCCACAGTACGTGAAAAGGATGAAGAGAACGAGATGCTTCATCAGCGGCTTC AGCAATATGAAAACCGCTGGTTAGAGTACGAACAGAAAATGAAAGCTATGGAGGAAATGTGGCAGAAGCAAATGCGTTCG CTGCAATCGAGCCTTTCCGTAGCAAAGAAGAGCCTTGTTTTGGATGAAACGCCTAGGATGTCGGACTCATCAGTGGATCA GAGCTGGGAAAGCAATGGGAACCACCATGTCAGCAGCGGTTCTCAGCTGGTGCCACACACTGGTGGACGTGAAATGAACG CTGGCCTCAGCGTCATCAGCCGCCTGGCAGAAGAATTCGAGCAGCGGAGCCAGGTTTTCGCTGATGACGCCAAGTTCCTG GTCGAGGTCAAGTCTGGGCAGGCGGACGCCAGCCTAAACCCAGACATGGAGCTCCGGAGGTTGAAGCAGAACTTCGACTC GTGGAAGAAAGATTTCAGTGGACGGATGAGGGAGACGAAGGTGATCCTGAACAAGCTCGGCAATGGCAACGAGTCATCGC CCAACTCTGTGAAGCGGAAGTGGTGGGGCAGGCTGAACACCTCCAAGTTTTCGTGA |