
Microexon ID | Ta_1D:225702953-225702966:+ |
Species | Triticum Aestivum | Coordinates | 1D:225702953..225702966 |
Microexon Cluster ID | MEP38 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Myosin_head |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CAYTTYARTRMAACTGGRAARATATSTGGTGCYAADATTCAAACWTTTYTRCTTGARAAGTCWAGAGTWGTYCARYKTGCWGAWGGWGARAGRTCATAYCATATWTTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTCTACTCGAGAAG |
Microexon Amino Acid seq | FLLEK |
Microexon-tag DNA Seq | CATTTCAGTACGACTGGAAGAATATGTGGTGCCATGGTTCAAACATTTCTACTCGAGAAGTCAAGGGTTGTACAGTGTGCAGTCGGTGAGCGTTCCTACCATATATTT |
Microexon-tag Amino Acid Seq | HFSTTGRICGAMVQTFLLEKSRVVQCAVGERSYHIF |
Microexon-tag spanning region | 225702786-225703100 |
Microexon-tag prediction score | 0.9568 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS1D02G159600.1x |
Reference Transcript ID | TraesCS1D02G159600.1 |
Gene ID | TraesCS1D02G159600 |
Gene Name | NA |
Transcript ID | TraesCS1D02G159600.1 |
Protein ID | |
Gene ID | TraesCS1D02G159600 |
Gene Name | |
Pfam domain motif | Myosin_head |
Motif E-value | 3.40E-242 |
Motif start | 184 |
Motif end | 841 |
Protein seq | >TraesCS1D02G159600.1 MASVEVRSVRKSAALRPRGPAKVQPARSMSLDYKYSAARAGVEPGPAPNGVGRRAAADEEGDAVPPEGDADSPYSSKATT TEEESAGGGGEADSASSAAAAPRSPSPAAAAGPSPRDTRWGDTSSYGAKKKHRVFCQLPNGDWALCTVITTSGDESVLKV PEGKVLRLKTESLQPANPEILDGVDDLMQLSYLSEPSVLYNLQYRYSQDMIYTKAGPVLVAVNPFKKVALYGNGYIKAYK NKTMDSPHVYAIADSALREMKRDEVNQSIIISGESGAGKTETAKIAMQYLASLGGGSGIEYEILQTNPILEAFGNAKTLR NDNSSRFGKLIEIHFSTTGRICGAMVQTFLLEKSRVVQCAVGERSYHIFYQLCAGAPTTLREKLNLKKVDEYKYLKQSCC YSIAGVDDAEMFRAVTEAMNIVHISQEDQDNVFAMVSAVLWLGDVSFTIIDNENHVEITVEEAAETVSRLLGCSIEDLNL ALSKRHMKVNNENIVQKLTLTQATDTRDALAKALYASLFEWLVEQINKSLSVGKRRTGRSISILDIYGFESFDKNSFEQF CINYANERLQQHFNRHLFKLEQEEYVEDGIDWAKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNATDLTFANKLKQHL DTNSCFRGERGKAFTVRHYAGEVAYDTSGFLEKNRDLLHMDSIQFLAKCKLSIPQTFASKMLAQSDNLESVPYRPSVADS QKLSVAMKFKGQLFQLMQRLESTTPHFIRCIKPNNLQLPAIYGQELVLQQLKCCGVLEVVRISRSGYPTRMTHQKFARRY GFLLLEDVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGNLENTRNRTLHGVLRVQSCFRGYQARRHASERIR GVLALQSFIRAENARQSYSSLLRKHRAATLVQKNLRGWRARRYFIKIRKASVVIQSGIRGCLVRRCAGNVDLLNVLREFE SKKEADGDQILIKASFLAELQRRILRAEATVREKDEENEMLHQRLQQYENRWLEYEQKMKAMEEMWQKQMRSLQSSLSVA KKSLALDETPRMSDSSVEQSWESNGNHVGGGSSQQLAAAPRITGREMNASMSVIGRLAEELEQRSQVFADDAKFLVEVKS GQADASLNPDVELRRLKQNFDSWKKDFGSRIRETKVILNKLASGGGGGGNESSPNSAKRKWWGRLNTSKFS* |
CDS seq | >TraesCS1D02G159600.1 ATGGCGTCGGTGGAGGTGCGGTCCGTGCGGAAGTCCGCGGCGTTGCGCCCGCGCGGGCCCGCCAAGGTGCAGCCCGCGCG GTCCATGTCGCTCGACTACAAGTACTCCGCCGCGCGTGCTGGCGTCGAGCCCGGCCCGGCGCCCAACGGCGTAGGGCGCC GGGCTGCGGCGGACGAGGAAGGGGATGCGGTGCCGCCCGAGGGAGACGCCGACTCTCCCTACAGCTCCAAGGCGACGACG ACGGAGGAGGAGAGTGCTGGGGGTGGCGGGGAGGCCGATTCAGCGTCCTCTGCAGCCGCGGCGCCGCGGAGTCCGTCGCC GGCGGCAGCTGCTGGCCCCTCACCGCGCGACACCAGATGGGGTGACACCAGCTCCTACGGTGCTAAAAAGAAGCATAGAG TTTTTTGCCAGCTTCCAAATGGTGATTGGGCCTTATGCACCGTGATTACTACCTCTGGTGACGAGTCTGTACTAAAGGTT CCTGAAGGAAAAGTTCTAAGATTGAAAACGGAGAGCCTTCAACCTGCAAATCCTGAAATTCTTGATGGAGTGGATGATCT TATGCAGCTGAGTTATCTAAGTGAACCATCTGTGCTGTACAACTTGCAGTACAGATATTCACAAGACATGATTTATACTA AAGCAGGTCCAGTTTTGGTGGCCGTCAACCCTTTTAAGAAGGTTGCACTGTATGGTAATGGGTATATTAAAGCATATAAA AACAAAACAATGGACAGTCCACATGTGTATGCAATAGCAGATTCAGCGCTTCGTGAAATGAAAAGAGATGAAGTTAACCA GTCCATTATTATAAGTGGTGAGAGTGGAGCAGGAAAAACAGAAACTGCAAAGATTGCCATGCAGTATCTGGCTTCACTTG GAGGTGGAAGTGGCATAGAGTATGAGATCCTACAGACTAACCCAATACTCGAGGCTTTTGGCAATGCAAAGACATTAAGA AATGATAATTCAAGTCGCTTCGGAAAGCTCATCGAAATTCATTTCAGTACGACTGGAAGAATATGTGGTGCCATGGTTCA AACATTTCTACTCGAGAAGTCAAGGGTTGTACAGTGTGCAGTCGGTGAGCGTTCCTACCATATATTTTATCAGCTATGTG CTGGTGCTCCAACGACACTCAGAGAGAAGTTGAATTTGAAGAAGGTGGATGAATACAAATATCTGAAACAGAGTTGTTGC TATTCAATTGCTGGCGTGGATGATGCCGAAATGTTTCGTGCTGTAACGGAAGCCATGAACATCGTCCATATCAGCCAGGA GGACCAAGATAATGTTTTCGCAATGGTTTCAGCTGTGCTCTGGCTTGGAGATGTCTCTTTCACAATTATTGATAATGAAA ATCATGTTGAGATCACTGTAGAAGAAGCTGCGGAAACGGTTTCACGACTTCTTGGCTGCAGTATTGAAGATCTCAATTTA GCTTTGTCAAAGCGGCACATGAAAGTTAATAATGAGAATATTGTCCAGAAGCTTACCCTTACACAGGCAACTGACACACG GGATGCTCTGGCCAAAGCACTCTATGCCAGTTTGTTCGAGTGGCTTGTAGAACAAATTAACAAGTCCCTTTCAGTTGGCA AGCGTCGAACTGGGAGATCAATCAGTATTCTTGACATCTACGGCTTTGAATCATTTGATAAAAACAGTTTTGAACAGTTC TGCATTAATTATGCCAATGAGAGGCTACAACAACATTTCAACCGCCATTTGTTTAAGCTTGAGCAAGAGGAATATGTTGA AGATGGCATTGACTGGGCTAAGGTTGAGTTTGAGGACAACCAGGATTGCTTGAATCTATTTGAGAAAAAACCACTGGGGT TATTGTCTCTGCTGGATGAGGAATCTACATTCCCTAATGCCACAGACCTTACTTTTGCAAACAAGCTGAAGCAACATCTT GACACTAATTCTTGCTTCAGAGGAGAAAGAGGCAAGGCTTTCACTGTCCGTCACTATGCAGGAGAGGTGGCGTATGACAC ATCGGGTTTTCTGGAGAAGAACAGAGATTTATTGCACATGGACTCGATTCAGTTCCTTGCCAAATGCAAATTATCTATAC CACAAACGTTTGCATCTAAGATGCTTGCTCAATCTGATAATCTAGAATCCGTACCATACAGGCCTAGTGTTGCTGATTCG CAGAAGTTAAGTGTAGCAATGAAGTTTAAGGGACAATTGTTCCAACTTATGCAAAGACTTGAAAGCACAACACCACACTT CATACGTTGTATTAAACCAAATAATTTGCAACTCCCTGCCATTTACGGACAAGAACTTGTGCTTCAACAACTGAAATGCT GCGGGGTTCTTGAAGTTGTGCGCATTTCAAGATCTGGGTACCCAACGAGAATGACTCATCAGAAGTTTGCTCGGCGGTAT GGTTTTCTTCTTCTTGAGGATGTTGCGTCTCAAGATCCACTTAGTGTTTCGGTTGCAATTCTTCATCAATTCAACATTTT GCCTGAGATGTATCAAGTTGGCTACACAAAGTTATTCTTCCGAACTGGTCAGATTGGCAACCTTGAGAATACTCGGAATC GTACTCTGCATGGTGTTTTAAGGGTTCAAAGTTGTTTCCGAGGGTATCAAGCACGGCGCCATGCAAGTGAACGAATCAGA GGAGTTTTGGCTCTTCAATCATTCATTCGTGCTGAGAATGCAAGGCAAAGTTATTCATCTCTGTTGAGGAAACATAGGGC AGCCACTCTTGTGCAGAAAAATCTAAGAGGCTGGCGTGCAAGAAGATACTTCATCAAGATACGGAAGGCTTCAGTGGTTA TACAATCTGGTATCCGCGGCTGCCTTGTTAGAAGATGCGCCGGCAATGTCGATCTACTGAACGTGTTGAGAGAATTCGAG TCGAAAAAGGAGGCAGACGGCGACCAAATCTTGATCAAGGCGTCTTTCCTGGCCGAGCTACAACGGCGAATCCTTCGTGC CGAGGCGACAGTTCGAGAGAAGGACGAGGAGAACGAGATGCTACACCAGCGGCTCCAGCAATACGAGAACCGGTGGCTAG AATACGAGCAGAAAATGAAGGCGATGGAGGAGATGTGGCAGAAGCAGATGCGGTCGCTGCAGTCGAGCCTGTCGGTGGCC AAGAAGAGCCTGGCCCTGGACGAGACGCCTCGGATGTCCGACTCGTCCGTGGAGCAGAGCTGGGAGAGCAACGGGAACCA CGTCGGTGGGGGCTCCTCCCAGCAGCTGGCGGCGGCGCCGCGGATCACCGGGCGCGAGATGAACGCCAGCATGAGCGTCA TCGGGCGGTTGGCGGAGGAGCTTGAGCAGCGGAGCCAGGTGTTCGCCGACGACGCCAAGTTCCTGGTGGAGGTCAAGTCC GGGCAGGCGGACGCGAGCCTGAACCCGGACGTGGAGCTCCGCAGGCTGAAGCAGAACTTCGACTCGTGGAAGAAGGACTT CGGCTCCCGCATCAGGGAGACCAAGGTGATCCTGAACAAGCTCGCGAGCGGCGGCGGCGGCGGCGGCAACGAGTCCTCCC CCAACTCGGCCAAGCGGAAGTGGTGGGGCAGGCTCAACACCTCCAAGTTCTCGTGA |
Ta_1D:225702953-225702966:+ does not have available information here.