
Microexon ID | Ta_1B:325810701-325810714:+ |
Species | Triticum Aestivum | Coordinates | 1B:325810701..325810714 |
Microexon Cluster ID | MEP38 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Myosin_head |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CAYTTYARTRMAACTGGRAARATATSTGGTGCYAADATTCAAACWTTTYTRCTTGARAAGTCWAGAGTWGTYCARYKTGCWGAWGGWGARAGRTCATAYCATATWTTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTCTACTCGAGAAG |
Microexon Amino Acid seq | FLLEK |
Microexon-tag DNA Seq | CATTTCAGTACGACTGGAAGAATATGTGGTGCCATGATTCAAACATTTCTACTCGAGAAGTCAAGGGTTGTACAGTGTGCAGTCGGTGAGCGTTCCTACCATATATTT |
Microexon-tag Amino Acid Seq | HFSTTGRICGAMIQTFLLEKSRVVQCAVGERSYHIF |
Microexon-tag spanning region | 325810534-325810848 |
Microexon-tag prediction score | 0.9619 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS1B02G179500.1x |
Reference Transcript ID | TraesCS1B02G179500.1 |
Gene ID | TraesCS1B02G179500 |
Gene Name | NA |
Transcript ID | TraesCS1B02G179500.1 |
Protein ID | |
Gene ID | TraesCS1B02G179500 |
Gene Name | |
Pfam domain motif | Myosin_head |
Motif E-value | 1.00E-242 |
Motif start | 186 |
Motif end | 843 |
Protein seq | >TraesCS1B02G179500.1 MASVEVRSVRKSAALRPRGPTKVQPARSMSLDYKYSAARAGVEAGPAPNGVGRRAAADEEEGEAVPPEGDADSPYSSKAT TTEEEGSAGGGGEANSASSAAATPRRPSPAAAAGPSPRDTRWGDTSSYGAKKKNRVFCQLPNGDWALCTVITTSGDESVL KVPEGKVLRLKTESLQPANPEILDGVDDLMQLSYLSEPSVLYNLQYRYSQDMIYTKAGPVLVAVNPFKKVALYGNEYIKA YRNKTMDSPHVYAIADSALREMKRDEVNQSIIISGESGAGKTETAKIAMQYLASLGGGSGIEYEILQTNPILEAFGNAKT LRNDNSSRFGKLIEIHFSTTGRICGAMIQTFLLEKSRVVQCAVGERSYHIFYQLCAGAPTTLREKLNLKKVDEYKYLKQS CCYSIAGVDDAEMFRAVTEAMNIVHISKEDQDNVFAMVSAVLWLGDVSFTIIDNENHVEITVEEAAETVSRLLGCSIEDL NLVLSKRHMKVNNENIVQKLTLTQATDTRDALAKALYASLFEWLVEQINKSLSVGKRRTGRSISILDIYGFESFDKNSFE QFCINYANERLQQHFNRHLFKLEQEEYVEDGIDWAKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNATDLTFANKLKQ HLDTNSCFRGERGKAFTVRHYAGEVAYDTSGFLEKNRDLLHMDSIQFLAKCKLSIPQTFASKMLAQSDNLESIPYRPSVA DSQKLSVAMKFKGQLFQLMQRLESTTPHFIRCIKPNNLQLPAIYGQELVLQQLKCCGVLEVVRISRSGYPTRMTHQKFAR RYGFLLLEDVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGNLENTRNRTLHGVLRVQSCFRGYQARRHASER IRGVLALQSCSYPSHCLVHFTVFLVAVSFSPAHAYCMGWLLFSSCSHSC* |
CDS seq | >TraesCS1B02G179500.1 ATGGCGTCGGTGGAGGTGCGGTCCGTGCGCAAGTCTGCGGCGCTGCGCCCGCGCGGGCCCACCAAGGTGCAGCCCGCGCG GTCCATGTCGCTCGACTACAAGTACTCTGCCGCGCGTGCCGGCGTCGAGGCCGGCCCGGCGCCCAACGGCGTCGGGCGCC GGGCCGCCGCGGACGAAGAGGAAGGGGAGGCCGTGCCGCCCGAGGGAGACGCCGACTCTCCCTACAGCTCCAAGGCGACG ACGACGGAGGAGGAGGGGAGTGCTGGAGGTGGCGGGGAGGCCAATTCGGCGTCCTCTGCGGCTGCGACGCCGCGGAGGCC GTCGCCGGCGGCAGCTGCTGGCCCCTCACCCCGCGACACCAGATGGGGTGACACCAGCTCCTACGGTGCTAAAAAGAAGA ATAGAGTTTTTTGTCAGCTTCCAAATGGTGATTGGGCCTTATGCACCGTGATTACTACCTCTGGTGACGAGTCTGTACTA AAGGTTCCTGAAGGAAAAGTTCTAAGATTGAAAACGGAGAGCCTTCAACCTGCAAATCCTGAAATTCTTGATGGAGTGGA TGATCTTATGCAGCTGAGTTATCTAAGTGAACCATCCGTGCTGTACAACTTGCAGTACAGATATTCACAAGACATGATTT ATACTAAAGCAGGTCCAGTTTTGGTGGCAGTCAACCCTTTTAAGAAGGTTGCACTGTATGGTAATGAGTATATTAAAGCA TATAGAAACAAAACAATGGACAGTCCACATGTGTATGCAATAGCAGATTCAGCGCTTCGTGAAATGAAAAGAGATGAAGT TAACCAGTCCATTATTATAAGTGGTGAGAGTGGAGCAGGAAAAACAGAAACTGCAAAGATCGCCATGCAGTATCTGGCTT CACTTGGAGGTGGAAGTGGCATAGAGTATGAGATCCTACAGACTAACCCAATACTCGAGGCTTTTGGCAATGCAAAGACA TTAAGAAATGATAATTCAAGTCGCTTCGGAAAGCTCATTGAAATTCATTTCAGTACGACTGGAAGAATATGTGGTGCCAT GATTCAAACATTTCTACTCGAGAAGTCAAGGGTTGTACAGTGTGCAGTCGGTGAGCGTTCCTACCATATATTTTATCAGC TATGTGCTGGTGCTCCAACGACTCTCAGAGAGAAGTTGAATTTGAAGAAGGTGGATGAATACAAATATCTGAAACAGAGT TGTTGCTATTCAATTGCTGGCGTGGATGATGCCGAAATGTTTCGTGCTGTAACGGAAGCCATGAACATCGTCCATATCAG CAAGGAGGACCAAGATAATGTTTTCGCAATGGTTTCAGCTGTGCTCTGGCTTGGAGATGTCTCTTTCACAATTATTGATA ATGAAAATCATGTTGAGATCACTGTAGAAGAAGCTGCGGAAACGGTTTCACGACTTCTTGGCTGCAGTATTGAAGATCTC AATTTAGTTTTGTCAAAGCGGCACATGAAAGTTAATAATGAGAATATTGTCCAGAAGCTTACCCTTACGCAGGCAACTGA CACAAGGGATGCTCTGGCCAAAGCGCTCTATGCCAGTTTGTTCGAGTGGCTTGTAGAACAAATTAACAAGTCCCTTTCAG TTGGCAAGCGTCGAACTGGGAGATCAATCAGTATTCTTGACATCTACGGCTTTGAATCATTTGATAAAAACAGTTTTGAA CAGTTCTGCATTAATTATGCAAATGAGAGGCTACAACAACATTTCAATCGCCATTTGTTTAAGCTTGAGCAAGAGGAATA TGTTGAAGATGGCATTGACTGGGCTAAGGTTGAGTTTGAGGACAACCAGGACTGCTTGAATCTATTTGAGAAAAAACCAC TGGGGTTGTTGTCTCTGCTGGATGAGGAATCTACATTCCCTAATGCCACAGACCTTACTTTTGCAAACAAGCTCAAGCAA CATCTTGACACTAATTCTTGCTTCAGAGGAGAAAGAGGCAAGGCTTTCACTGTCCGTCACTATGCAGGAGAGGTGGCGTA TGACACATCGGGTTTTCTGGAGAAGAACAGAGATTTATTGCACATGGACTCAATTCAGTTCCTTGCCAAATGCAAATTAT CTATACCACAAACTTTTGCATCTAAGATGCTTGCTCAATCTGATAATCTTGAATCCATACCATACAGGCCTAGTGTTGCT GATTCACAGAAGTTAAGTGTAGCAATGAAGTTTAAGGGACAATTATTCCAACTTATGCAAAGACTTGAAAGCACAACACC ACACTTCATACGTTGTATTAAACCAAATAATTTGCAACTCCCTGCCATTTACGGACAAGAACTTGTGCTTCAGCAACTGA AATGCTGCGGGGTTCTTGAAGTTGTGCGCATTTCAAGATCTGGGTACCCAACGAGAATGACTCATCAGAAGTTTGCTCGG CGGTATGGTTTTCTTCTTCTTGAGGATGTTGCGTCTCAAGATCCACTTAGTGTTTCGGTTGCAATTCTTCATCAATTCAA CATTTTGCCTGAGATGTATCAAGTTGGCTACACAAAGTTGTTCTTCCGAACTGGTCAGATTGGCAACCTTGAGAATACTC GGAATCGTACTCTACATGGTGTTTTAAGGGTTCAAAGCTGTTTCAGAGGGTATCAAGCACGACGCCATGCAAGTGAACGA ATCAGAGGAGTTTTGGCTCTTCAATCATGTAGCTACCCAAGCCACTGCCTTGTGCATTTTACTGTATTTCTTGTTGCTGT ATCTTTCTCTCCTGCTCATGCTTACTGTATGGGCTGGTTGCTCTTCTCATCTTGCAGTCATTCGTGCTGA |
Ta_1B:325810701-325810714:+ does not have available information here.