
Microexon ID | Ta_1A:292084903-292084916:- |
Species | Triticum Aestivum | Coordinates | 1A:292084903..292084916 |
Microexon Cluster ID | MEP38 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Myosin_head |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CAYTTYARTRMAACTGGRAARATATSTGGTGCYAADATTCAAACWTTTYTRCTTGARAAGTCWAGAGTWGTYCARYKTGCWGAWGGWGARAGRTCATAYCATATWTTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTCTACTCGAGAAG |
Microexon Amino Acid seq | FLLEK |
Microexon-tag DNA Seq | CATTTCAGTACGACTGGAAGAATATGTGGTGCCATGATTCAAACATTTCTACTCGAGAAGTCAAGAGTTGTACAGTGTGCGGTCGGTGAGCGTTCCTACCATATATTT |
Microexon-tag Amino Acid Seq | HFSTTGRICGAMIQTFLLEKSRVVQCAVGERSYHIF |
Microexon-tag spanning region | 292084770-292085083 |
Microexon-tag prediction score | 0.9606 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS1A02G162800.1x |
Reference Transcript ID | TraesCS1A02G162800.1 |
Gene ID | TraesCS1A02G162800 |
Gene Name | NA |
Transcript ID | TraesCS1A02G162800.1 |
Protein ID | |
Gene ID | TraesCS1A02G162800 |
Gene Name | |
Pfam domain motif | Myosin_head |
Motif E-value | 1.10E-240 |
Motif start | 188 |
Motif end | 849 |
Protein seq | >TraesCS1A02G162800.1 MASVEVRSVRKSAALRPRGPTKVQPARSMSLDYKYSAARAGVEAGPAANGVGRRAAAAAADEEGEAVPPERDADSPYSSK ATTTEEEESAGGGGEVDSASSAAATLRRPSPTAAAGPSPRDTRWGDTSSYGAKKKHRVFCQLPNGDWALCTVITTSGDES VLKVPEGKVLRLKTESLQPANPEILDGVDDLMQLSYLSEPSVLYNLQYRYSQDMIYTKAGPVLVAVNPFKKVALYGNEYI KAYRNKTMDSPHVYAIADSALREMKRDEVNQSIIISGESGAGKTETAKIAMQYLASLGGGSGIEYEILQTNPILEAFGNA KTLRNDNSSRFGKLIEIHFSTTGRICGAMIQTFLLEKSRVVQCAVGERSYHIFYQLCAGAPTTLREKLNLKKVDEYKYLK QSCCYSIAGVDDAEMFHAVTEAMNIVHISKEDQDNVFAMVSAVLWLGDVSFTIIDNENHVEITVEEDFISAAETVSRLLG CSIEDLNLVLSKRHMKVNNENIVQKLTLTQATDTRDALAKALYASLFEWLVEQINKSLSVGKRRTGRSISILDIYGFESF DKNSFEQFCINYANERLQQHFNRHLFKLEQEEYVEDGIDWAKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNATDLTF ANKLKQHLDTNSCFRGERGKAFTVRHYAGEVAYDTSGFLEKNRDLLHMDSIQFLAKCKLSIPQTFASKMLAQSDNLESVP YRPSVADSQKLSVAMKFKGQLFQLMQRLESTTPHFIRCIKPNNLQLPAIYGQELVLQQLKCCGVLEVVRISRSGYPTRMT HQKFARRYGFLLLEDVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGNLENTRNRTLHGVLRVQSCFRGHQAR RHASERIRGVLALQSFIRAENARQSYSSLSKKHRAATLVQKNLKGWLARRYFIKIRKASVVVQSGIRGCLVRRCAGNVDL LNVLREFESKKEADGDQILIKASFLAELQRRILRAEATVREKDEENEMLHQRLQQYENRWLEYEQKMKAMEEMWQKQMRS LQSSLSVAKKSLALDETPRMSDSSVEQSWESNGNHVGGGSSQQLAAAPRITGRDMNASMSVIGRLAEELEQRSQVFADDA KFLVEVKSGQADASLNPDVELRRLKQNFDSWKKDFGSRIRETKVILNKLASGGGGGNESSPNSAKRKWWGRLNTSKFS* |
CDS seq | >TraesCS1A02G162800.1 ATGGCGTCGGTGGAGGTGCGGTCCGTGCGCAAGTCCGCGGCGCTGCGCCCGCGCGGGCCCACCAAGGTGCAGCCCGCGCG GTCCATGTCGCTCGACTACAAGTACTCCGCCGCGCGTGCCGGCGTCGAAGCCGGCCCGGCGGCCAACGGCGTCGGGCGCC GGGCCGCTGCTGCGGCGGCGGACGAGGAAGGGGAGGCGGTGCCGCCCGAGAGAGACGCCGACTCTCCCTACAGCTCCAAG GCGACGACAACGGAGGAGGAGGAGAGTGCTGGGGGTGGCGGGGAGGTCGATTCGGCGTCCTCTGCAGCCGCAACGCTGCG GAGGCCGTCGCCGACGGCGGCTGCTGGCCCCTCACCACGCGACACCAGATGGGGTGACACCAGCTCCTACGGTGCTAAAA AGAAGCATAGAGTTTTTTGTCAGCTTCCAAATGGTGATTGGGCCTTATGCACCGTGATTACTACCTCTGGTGACGAGTCT GTACTAAAGGTTCCTGAAGGAAAAGTTCTAAGATTGAAAACGGAGAGCCTTCAACCTGCAAATCCTGAAATTCTTGATGG AGTGGATGATCTTATGCAGCTGAGTTATCTAAGTGAGCCATCTGTGCTGTACAACTTGCAGTACAGATATTCACAAGACA TGATTTATACTAAAGCAGGTCCAGTTTTGGTGGCCGTCAACCCTTTTAAGAAGGTTGCACTGTATGGTAATGAGTATATT AAAGCATATAGAAACAAAACAATGGACAGTCCACATGTGTATGCAATAGCAGATTCAGCGCTTCGTGAAATGAAAAGAGA TGAAGTTAACCAGTCCATTATTATAAGTGGTGAGAGTGGAGCAGGAAAAACAGAAACTGCAAAGATTGCCATGCAGTATC TGGCTTCACTTGGAGGTGGAAGTGGCATAGAGTATGAGATCCTACAGACCAACCCAATACTCGAGGCGTTTGGCAATGCA AAGACATTAAGAAATGATAATTCAAGTCGCTTCGGAAAGCTCATTGAAATTCATTTCAGTACGACTGGAAGAATATGTGG TGCCATGATTCAAACATTTCTACTCGAGAAGTCAAGAGTTGTACAGTGTGCGGTCGGTGAGCGTTCCTACCATATATTTT ATCAGCTATGTGCTGGTGCTCCAACGACTCTCAGAGAGAAGTTGAATTTGAAGAAGGTGGATGAATACAAATATCTGAAA CAGAGTTGTTGCTATTCAATTGCTGGTGTGGATGATGCCGAAATGTTTCATGCTGTAACGGAAGCTATGAACATCGTCCA TATCAGCAAGGAGGACCAAGATAATGTTTTTGCAATGGTTTCAGCTGTGCTCTGGCTTGGAGATGTCTCTTTCACAATTA TTGATAATGAAAATCATGTTGAGATCACTGTAGAAGAAGATTTTATTTCAGCTGCGGAAACGGTTTCACGACTTCTTGGC TGCAGTATTGAAGATCTCAATTTAGTTTTGTCAAAGCGGCACATGAAAGTTAATAATGAGAATATTGTCCAGAAGCTTAC TCTTACACAGGCAACTGACACAAGGGATGCTCTGGCCAAAGCTCTCTATGCCAGTTTGTTCGAGTGGCTTGTAGAACAAA TTAACAAGTCCCTTTCAGTTGGCAAGCGTCGAACTGGGAGATCAATCAGTATTCTTGACATCTACGGCTTTGAATCATTT GATAAAAACAGTTTTGAACAGTTCTGCATTAATTATGCCAACGAGAGGCTACAACAACATTTCAATCGCCATTTGTTTAA GCTTGAGCAAGAGGAATATGTTGAAGATGGCATTGACTGGGCTAAGGTTGAGTTTGAGGACAATCAGGACTGTTTGAATC TATTTGAGAAGAAACCACTGGGGTTGTTGTCTCTGCTGGATGAGGAATCTACATTCCCTAATGCCACAGACCTTACTTTT GCAAACAAGCTCAAGCAACATCTTGACACTAATTCTTGCTTCAGAGGAGAAAGAGGCAAGGCTTTCACTGTCCGTCACTA TGCAGGAGAGGTGGCGTATGACACATCGGGTTTTCTGGAGAAGAACAGAGATTTATTGCACATGGACTCAATTCAGTTCC TTGCCAAATGCAAATTATCTATACCACAAACGTTTGCATCTAAGATGCTTGCTCAATCTGATAATCTAGAATCTGTACCA TACAGGCCTAGTGTTGCTGATTCACAGAAGTTAAGTGTAGCAATGAAGTTTAAGGGACAATTGTTCCAACTTATGCAAAG ACTTGAAAGCACAACACCACACTTCATACGTTGCATTAAACCAAATAATTTGCAGCTCCCTGCCATTTACGGACAAGAAC TTGTGCTTCAGCAACTGAAATGCTGCGGGGTTCTTGAAGTTGTGCGCATTTCAAGATCTGGGTACCCAACGAGAATGACT CATCAGAAGTTTGCTCGGCGGTATGGTTTTCTTCTTCTTGAGGATGTTGCGTCTCAAGATCCACTTAGTGTTTCGGTTGC AATTCTTCATCAATTCAACATTTTGCCTGAGATGTATCAAGTTGGCTACACAAAGTTGTTCTTCCGAACTGGTCAGATTG GCAACCTTGAGAATACTCGGAATCGTACTCTACATGGTGTTTTAAGGGTTCAAAGCTGTTTCAGAGGGCATCAAGCACGG CGCCATGCAAGTGAACGAATCAGAGGAGTTTTGGCTCTTCAATCATTCATTCGTGCTGAGAATGCAAGACAAAGTTATTC ATCTCTGTCGAAGAAACATAGGGCAGCCACTCTTGTGCAGAAAAATCTAAAAGGCTGGCTTGCAAGAAGATACTTCATTA AGATACGGAAGGCTTCAGTGGTTGTACAATCTGGTATCCGTGGTTGTCTTGTTAGAAGATGCGCCGGCAATGTTGATCTA CTGAACGTGTTAAGAGAATTTGAATCGAAAAAGGAGGCAGACGGCGACCAAATCTTGATCAAGGCGTCCTTCCTGGCCGA GCTGCAACGCCGAATCCTAAGAGCGGAGGCTACAGTTCGAGAGAAGGATGAGGAGAACGAGATGCTACACCAGCGGCTCC AGCAATACGAGAACCGATGGTTAGAATACGAGCAGAAAATGAAGGCGATGGAGGAGATGTGGCAGAAGCAGATGCGGTCG CTGCAGTCAAGCCTGTCGGTGGCGAAGAAGAGCCTGGCCCTGGACGAGACGCCTCGGATGTCGGACTCGTCCGTGGAGCA GAGCTGGGAGAGCAACGGGAACCACGTGGGCGGGGGCTCCTCCCAGCAGCTGGCCGCGGCGCCGCGGATCACCGGGCGCG ATATGAACGCCAGCATGAGCGTCATCGGGCGGCTGGCGGAGGAGCTGGAGCAGCGGAGCCAGGTGTTCGCCGACGACGCC AAGTTCCTGGTGGAGGTCAAGTCCGGGCAGGCGGACGCGAGCCTGAACCCGGACGTGGAGCTCCGCAGGCTGAAGCAGAA CTTCGACTCGTGGAAGAAGGACTTCGGCTCCCGCATCAGGGAGACCAAGGTGATCCTGAACAAGCTCGCGAGCGGCGGCG GCGGCGGCAACGAGTCCTCCCCCAACTCGGCCAAGCGGAAGTGGTGGGGCAGGCTCAACACCTCCAAGTTCTCGTGA |
Ta_1A:292084903-292084916:- does not have available information here.