
Microexon ID | Sl_2:20807701-20807714:+ |
Species | Solanum Lycopersicum | Coordinates | 2:20807701..20807714 |
Microexon Cluster ID | MEP38 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Myosin_head |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CAYTTYARTRMAACTGGRAARATATSTGGTGCYAADATTCAAACWTTTYTRCTTGARAAGTCWAGAGTWGTYCARYKTGCWGAWGGWGARAGRTCATAYCATATWTTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTCTACTTGAAAAG |
Microexon Amino Acid seq | FLLEK |
Microexon-tag DNA Seq | CACTTTAGTGAGACTGGAAAAATATCTGGGGCTAATATTCAAACATTTCTACTTGAAAAGTCAAGAGTGGTTCAATGTAGCGAGGGAGAAAGGTCATATCATATATTT |
Microexon-tag Amino Acid Seq | HFSETGKISGANIQTFLLEKSRVVQCSEGERSYHIF |
Microexon-tag spanning region | 20807534-20807849 |
Microexon-tag prediction score | 0.9727 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Solyc02g020910.3.1x |
Reference Transcript ID | Solyc02g020910.3.1 |
Gene ID | Solyc02g020910.3 |
Gene Name | NA |
Transcript ID | Solyc02g020910.3.1 |
Protein ID | |
Gene ID | Solyc02g020910.3 |
Gene Name | |
Pfam domain motif | Myosin_head |
Motif E-value | 7.70E-246 |
Motif start | 162 |
Motif end | 820 |
Protein seq | >Solyc02g020910.3.1 MAQRVKGTPSLNSIKSLPVGYAFGLNKSETVDAANHRMASNTVSKNGELLNEANGNADGYSEESPYSRLNFSVEESLSSG DDDLSTNAFTPSCVKSKWSDTTSYVTKKKLHSWFQLADGSWELTTFISKSGNEVLISLSEGKVLKVKADDLIPANPDILD GVDDLMQLSYLNEPSVLYNLQYRYNRDMIYTKAGPVLVAVNPFKKVALYSNEYIEAYKRKSVESPHVYAITDMAIREMVR DEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEDEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKIS GANIQTFLLEKSRVVQCSEGERSYHIFYQLCAGAPGALKEKLNLKDVSEYNYLRQSNCHSISGVDDAEQFRIVMEALDVV HISKEDQESVFSMLAAVLWLGNISFTAVDNENHAEPVVGEGLATVSTLIGCGVDELKLALSTRKMRVRNDDIVQKLTLSQ ATDTRDALAKSIYSCLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFERNSFEQFCINYANERLQQHFNRHLFKLEQ EEYIQDGIDWTKVDFDDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDISFANKLKQHLNSNLCFRGERGKAFTVSHYAGE VTYDTTGFLEKNRDLLHSNSIQLLSSCKFHLPQTFASNMLSQSEKPVVGPLYKSGGADSQKLSVSTKFKGQLFQLMQRLE NTTPHFIRCIKPNNFQSPGKYEQELVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLDHVSSQDPLSVSVAIL HQFNILPDMYQVGFTKLFFRTGQIGVLEDTRNRTLHGILCVQSCFRGHQARRDLKHFQRGIATLQSYVRGEKARKEYAIL LQKHKAAVCIQKQIRGRTKRKTYENVHDASIVIQSVIRGWLVRRCSGDIGLLQFGGRKGNESEEVLVKSSFLAELQRRVL RAEAALREKEEENDILHQRLQQYENRWSEYELKMKSMEEIWQKQMRSLQSSLSIAKRSLALDDSRRNSDASVNPTDEKES SWETGSNQRARESNGVRPMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEANLSPDRELRRLKQMFEAWKKDYG SRLRETKVILNKLGSDEGGSDKMKKKWWGRRNSTRLN* |
CDS seq | >Solyc02g020910.3.1 ATGGCACAGAGAGTTAAAGGCACCCCATCACTAAACTCCATCAAATCACTGCCAGTCGGATATGCATTTGGTTTGAACAA GTCCGAGACTGTCGATGCGGCTAATCATAGAATGGCATCCAATACTGTCTCCAAGAATGGAGAACTGTTGAATGAGGCTA ATGGCAATGCTGATGGATATAGTGAGGAATCCCCTTACAGTAGATTGAACTTTTCTGTTGAGGAAAGCCTGTCTAGTGGT GATGATGATCTGAGCACCAATGCATTCACACCGTCTTGTGTAAAATCGAAATGGAGTGACACCACGTCTTATGTGACAAA AAAGAAGCTTCATTCATGGTTTCAATTAGCTGATGGGAGCTGGGAGCTGACAACATTCATTTCGAAATCTGGAAATGAAG TTCTCATATCATTGTCTGAAGGAAAAGTTTTAAAAGTTAAAGCTGATGATTTAATACCTGCAAATCCTGATATTCTTGAT GGTGTGGATGATCTTATGCAATTGAGTTATCTAAATGAGCCATCAGTGCTGTACAATCTTCAGTACAGATACAATAGAGA TATGATTTATACAAAAGCTGGTCCAGTTCTTGTTGCTGTGAATCCTTTCAAGAAAGTCGCATTGTATAGCAACGAGTACA TTGAAGCTTATAAACGTAAATCCGTTGAGAGCCCACATGTATATGCCATCACAGATATGGCAATAAGAGAAATGGTTCGA GATGAAGTGAATCAGTCTATCATTATAAGTGGGGAAAGCGGAGCTGGCAAAACTGAAACAGCAAAGATTGCAATGCAATA CTTGGCTGCCCTTGGAGGTGGTAGTGGAATAGAGGATGAGATTCTGAAAACAAATCCGATTTTAGAAGCCTTTGGCAATG CTAAAACTTTAAGAAATGACAACTCAAGTCGATTTGGGAAGCTTATTGAGATTCACTTTAGTGAGACTGGAAAAATATCT GGGGCTAATATTCAAACATTTCTACTTGAAAAGTCAAGAGTGGTTCAATGTAGCGAGGGAGAAAGGTCATATCATATATT TTATCAGCTCTGTGCAGGAGCTCCAGGAGCTCTCAAAGAAAAATTAAATTTGAAGGATGTGAGTGAGTATAACTATTTGA GGCAAAGCAATTGCCACTCAATTTCTGGGGTTGATGATGCAGAACAATTTCGTATTGTAATGGAAGCACTCGATGTTGTC CATATCAGCAAGGAGGATCAAGAAAGTGTTTTTTCGATGCTAGCTGCAGTTTTATGGCTTGGAAATATCTCTTTTACAGC CGTCGATAATGAAAACCATGCTGAGCCAGTTGTGGGTGAAGGCCTAGCAACTGTTTCAACTTTAATCGGGTGTGGTGTGG ACGAGCTAAAACTAGCTTTATCAACTCGAAAAATGAGAGTAAGAAATGATGATATTGTCCAAAAGCTAACACTATCTCAG GCTACTGACACAAGAGATGCATTGGCAAAATCTATTTATTCTTGTCTGTTTGACTGGCTCGTTGAACAAATAAACAAGTC ACTTGCAGTAGGCAAACGTCGAACCGGAAGATCTATCAGCATTCTTGATATTTATGGTTTTGAATCATTCGAGAGGAACA GCTTTGAGCAGTTCTGCATTAATTATGCCAATGAAAGGTTGCAACAACACTTTAACCGTCACTTGTTCAAGTTGGAACAG GAGGAGTATATTCAAGATGGCATTGATTGGACTAAAGTTGATTTTGATGACAACCAAGATTGTCTAAATCTGTTTGAGAA GAAACCGCTGGGTTTGTTATCTCTGTTAGACGAGGAGTCCACCTTTCCTAATGGCACTGACATATCATTTGCCAATAAAC TCAAGCAGCATCTAAATTCTAATCTTTGTTTCAGAGGGGAACGAGGCAAGGCTTTTACAGTAAGCCATTATGCAGGGGAG GTAACTTATGATACAACTGGATTTCTTGAGAAGAATCGTGATTTACTGCACTCCAACTCAATTCAGCTTCTATCTTCTTG CAAGTTCCACCTTCCTCAAACATTTGCATCAAATATGCTTTCTCAATCTGAGAAGCCTGTTGTTGGCCCATTGTACAAAT CTGGTGGAGCAGACTCCCAGAAATTAAGTGTTTCCACAAAATTCAAGGGGCAATTGTTCCAACTAATGCAACGACTAGAG AACACAACTCCACATTTCATACGTTGTATCAAGCCCAACAATTTTCAGTCTCCTGGAAAGTATGAGCAAGAACTTGTATT GCAGCAGTTACGATGTTGTGGTGTCTTAGAGGTAGTTCGGATATCAAGATCTGGGTTTCCTACCAGAATGTCCCATCAGA AGTTTGCTAGAAGGTACGGGTTCCTTTTATTAGACCATGTTTCATCACAAGATCCTCTCAGTGTCTCGGTTGCAATATTG CATCAGTTCAATATTCTGCCTGATATGTACCAAGTTGGTTTCACAAAGTTGTTTTTCCGAACTGGACAGATTGGAGTTCT TGAAGATACAAGAAATCGCACTCTCCATGGCATCTTATGTGTTCAAAGCTGTTTTAGAGGTCACCAAGCTCGCCGAGATC TTAAACATTTTCAAAGAGGAATTGCTACACTTCAGTCATATGTACGTGGCGAGAAAGCTAGAAAAGAATATGCAATCTTA CTACAGAAACACAAAGCAGCTGTGTGTATACAAAAGCAAATAAGAGGCAGGACCAAAAGGAAGACTTACGAAAATGTTCA TGATGCATCAATTGTGATACAATCTGTGATTCGTGGCTGGTTAGTCAGAAGATGCTCAGGAGACATTGGACTGTTACAAT TTGGCGGGAGAAAGGGTAATGAGTCAGAAGAGGTGCTGGTGAAGTCTTCTTTCCTGGCAGAGTTACAACGTCGAGTCCTT AGAGCTGAAGCTGCTCTACGAGAAAAAGAAGAGGAGAATGACATACTTCACCAGAGACTACAGCAGTATGAGAATCGTTG GTCAGAGTATGAGTTGAAAATGAAATCCATGGAAGAAATATGGCAGAAACAAATGAGATCGCTGCAGTCAAGTCTTTCCA TTGCAAAAAGGAGCTTAGCCCTTGATGATTCCAGGAGGAACTCCGATGCATCTGTCAATCCAACTGATGAGAAAGAGTCT AGCTGGGAGACAGGAAGTAACCAGAGGGCCAGAGAGAGCAATGGAGTACGACCAATGAGCGCAGGTCTTAGTGTCATAAG CCGATTAGCGGAGGAGTTTGAGCAGAGGAGTCAAGTGTTTGGTGACGATGCTAAGTTCTTGGTGGAAGTAAAATCAGGTC AAGTTGAGGCTAACTTGAGTCCAGATCGTGAGCTAAGGAGGTTGAAGCAGATGTTTGAAGCTTGGAAGAAAGATTATGGA TCAAGATTGAGAGAAACAAAGGTGATTCTGAATAAACTGGGGAGTGATGAAGGAGGCAGTGACAAAATGAAAAAGAAATG GTGGGGAAGGAGGAATAGCACAAGGTTGAACTAA |
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