
Microexon ID | Sb_1:19549640-19549653:- |
Species | Sorghum Bicolor | Coordinates | 1:19549640..19549653 |
Microexon Cluster ID | MEP38 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Myosin_head |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CAYTTYARTRMAACTGGRAARATATSTGGTGCYAADATTCAAACWTTTYTRCTTGARAAGTCWAGAGTWGTYCARYKTGCWGAWGGWGARAGRTCATAYCATATWTTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTTGCTTGAGAAG |
Microexon Amino Acid seq | FLLEK |
Microexon-tag DNA Seq | CATTTCAGTACCACTGGAAGAATATGTGGTGCCATGATTCAAACATTTTTGCTTGAGAAGTCCAGAGTTGTACAATGTGCAGTTGGTGAGCGATCCTACCATATATTT |
Microexon-tag Amino Acid Seq | HFSTTGRICGAMIQTFLLEKSRVVQCAVGERSYHIF |
Microexon-tag spanning region | 19549500-19549808 |
Microexon-tag prediction score | 0.9762 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | EER94044x |
Reference Transcript ID | EER94044 |
Gene ID | SORBI_3001G212300 |
Gene Name | NA |
Transcript ID | EER94044 |
Protein ID | |
Gene ID | SORBI_3001G212300 |
Gene Name | |
Pfam domain motif | Myosin_head |
Motif E-value | 6.80E-243 |
Motif start | 198 |
Motif end | 855 |
Protein seq | >EER94044 MASVEVRSVRKSAALRARGGPSKLQPARSMPLDYRYSAAGAASSPNGGGRGPAANGVGRRAAAAESEKEEDLVRLERDDA DSPYSSKAVTAEEEEEEVGERGGGGDEVDSVAAATPRRLSPRAAASPTEGDARWSDTSSYGAKKKHRVFCQLPNGDWALC TVLTTSGDESVLKVSEGKVLRLKTDSLQPANPEILDGVDDLMQLSYLSEASVLYNLQYRYSQDMIYTKAGPVLVAVNPFK KVSLYGNEYIDAYRNKSMDSPHVYAIADAALREMKRDEVNQSIIISGESGAGKTETAKIAMQYLASLGGGSGIEYEILQT NPILEAFGNAKTLRNDNSSRFGKLIEIHFSTTGRICGAMIQTFLLEKSRVVQCAVGERSYHIFYQLCAGAPVSLREKLNL KKVDEYKYLKQSCCYSIAGVDDAQMFRTVTEAMNIVHISKEDQENVFAMVSAVLWLGDVSFTVIDNESHVEIIVDEASRT VAELLGCSIEDLNLALSKRHMKVNNENIVQKLTLAQATDTRDALAKSVYASLFEWLVEQINKSLSVGKRRTGRSISILDI YGFESFDKNSFEQFCINYANERLQQHFNRHLFKLEQEEYVEDGIDWAKVDFEDNQDCLSLFEKKPLGLLSLLDEESTFPN ATDLTFANKLKQHLDSNSCFRGERGKAFAVRHYAGEVAYDTSGFLEKNRDLLHMDSIQLLAKCKTSLPKMFASKMLVQSD NSMSVPYRSSAADSQKLSVAMKFKGQLFQLMQRLESTTPHFIRCIKPNNLQLPAIYEQGLVLQQLKCCGVLEVVRISRSG YPTRMTHQKFARRYGFLLLEDVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGKLEDTRNRTLHGILRVQSCF RGHQARHHARERIRGVLALQSFIRGENARQIYSSLSRKHRAAVILQRNVRCWLARRYFIKLRKASVIIQSGIRGSLVRRC NGNIDLINVLREFESKQEAEGDQILIKASVLAELQRRILKAEATVREKDEENEMLHQRLQQYENRWLEYEQKMKAMEEMW QKQMRSLQSSLSVAKKSLALDETPRMSDSSVDQSWESNGNHVSSGSQLVPRTGGREMNAGLSVIGRLNEEFEQRSQVFAD DAKFLVEVKSGQADASLNPDMELRRLKQNFDSWKKDFSGRIRETKVILNKLGNGNESSPNSVKRKWWGRLNTSKFS* |
CDS seq | >EER94044 ATGGCGTCGGTGGAGGTGCGGTCGGTACGGAAGTCCGCGGCCCTGCGTGCGCGCGGCGGGCCCAGCAAGCTGCAGCCGGC GCGGTCCATGCCGCTCGACTACAGGTACTCGGCCGCCGGGGCCGCCTCGTCGCCGAACGGTGGCGGGCGCGGGCCGGCTG CGAACGGCGTCGGGCGTCGTGCGGCTGCGGCGGAGTCAGAGAAGGAAGAGGATTTGGTGCGGTTGGAGCGGGACGACGCG GACTCGCCGTACAGCTCCAAGGCGGTGACGGCAGAGGAGGAGGAGGAGGAAGTGGGGGAGAGAGGTGGAGGAGGAGACGA GGTGGATTCGGTGGCCGCGGCGACGCCAAGGAGATTGTCGCCGAGGGCAGCGGCGAGCCCCACGGAAGGCGACGCCAGGT GGAGTGACACCAGCTCGTACGGAGCTAAGAAGAAGCATAGAGTTTTCTGTCAGCTTCCGAACGGTGATTGGGCATTATGC ACAGTACTTACAACCTCTGGTGATGAGTCCGTTCTAAAGGTTTCTGAAGGAAAAGTACTGCGATTGAAAACAGACAGTCT TCAACCTGCAAATCCTGAAATTCTTGATGGAGTGGATGATCTTATGCAGCTAAGTTATCTAAGTGAAGCATCAGTACTAT ACAATCTGCAGTACAGATACTCCCAGGACATGATTTATACTAAAGCAGGTCCAGTTTTGGTGGCTGTCAATCCTTTCAAG AAAGTTTCATTGTATGGTAATGAGTACATTGATGCATATAGAAATAAATCAATGGACAGTCCACATGTTTATGCAATAGC AGATGCAGCACTTCGTGAAATGAAAAGAGATGAAGTCAACCAATCTATAATTATAAGTGGTGAGAGTGGAGCAGGAAAAA CAGAAACCGCAAAAATTGCTATGCAGTATCTAGCTTCTCTTGGAGGTGGAAGTGGTATTGAATATGAAATTCTTCAGACC AATCCAATACTCGAGGCTTTTGGCAATGCAAAGACATTGAGAAATGATAACTCAAGTCGTTTTGGAAAGCTTATCGAAAT TCATTTCAGTACCACTGGAAGAATATGTGGTGCCATGATTCAAACATTTTTGCTTGAGAAGTCCAGAGTTGTACAATGTG CAGTTGGTGAGCGATCCTACCATATATTTTATCAGCTGTGTGCTGGTGCACCTGTGTCTCTAAGAGAGAAGTTGAATTTG AAAAAGGTGGATGAGTACAAATATCTTAAACAGAGCTGTTGCTATTCAATTGCGGGTGTGGATGATGCCCAAATGTTTCG AACTGTGACGGAAGCTATGAACATCGTTCATATCAGCAAAGAGGACCAAGAGAATGTTTTTGCAATGGTCTCTGCTGTTC TATGGCTGGGGGATGTCTCATTTACAGTAATTGACAATGAAAGTCATGTTGAAATCATTGTAGATGAAGCTTCAAGAACG GTTGCAGAACTTCTTGGCTGCAGTATTGAAGATCTCAATCTAGCTTTGTCAAAGCGCCACATGAAAGTCAATAATGAAAA CATTGTCCAGAAACTTACCCTTGCTCAGGCAACTGACACAAGAGATGCTCTGGCCAAATCAGTCTATGCCAGTTTGTTTG AGTGGCTTGTAGAACAAATTAATAAGTCTCTCTCAGTAGGCAAGCGTCGAACTGGGAGATCAATCAGTATTCTTGATATC TATGGCTTTGAGTCATTTGATAAGAACAGTTTTGAACAGTTCTGCATTAATTATGCTAATGAAAGGTTGCAACAACATTT CAATCGTCATTTGTTTAAGCTTGAGCAAGAGGAATATGTGGAGGATGGCATTGACTGGGCAAAGGTTGACTTTGAGGATA ATCAAGACTGTTTGAGTCTCTTTGAGAAAAAACCACTGGGGTTATTGTCTCTGCTGGACGAGGAATCTACTTTCCCCAAT GCCACAGATCTTACTTTTGCAAACAAGCTTAAGCAACATCTTGACTCGAACTCTTGCTTCAGAGGAGAAAGAGGCAAGGC ATTTGCTGTCCGTCACTATGCAGGAGAGGTGGCTTATGATACTTCGGGTTTTCTGGAGAAGAATAGAGATTTATTGCACA TGGACTCGATTCAGCTCCTTGCCAAATGCAAGACTTCTCTGCCAAAAATGTTTGCATCTAAGATGCTAGTTCAATCAGAT AATTCTATGTCTGTTCCATATAGATCTAGTGCTGCTGATTCTCAAAAACTAAGTGTTGCCATGAAGTTCAAGGGTCAACT GTTCCAACTTATGCAAAGACTGGAAAGTACAACACCACACTTTATTCGCTGCATTAAACCAAATAATTTACAACTCCCTG CAATTTACGAACAAGGACTTGTGCTTCAACAACTTAAATGCTGTGGGGTTCTTGAGGTTGTCCGGATTTCAAGATCTGGA TATCCAACAAGAATGACTCACCAGAAGTTTGCTCGGCGGTATGGCTTTCTTCTTCTTGAGGATGTTGCATCCCAAGATCC ACTCAGTGTTTCAGTTGCAATTCTTCATCAGTTCAACATTTTACCTGAGATGTATCAAGTTGGCTACACAAAGTTGTTTT TCCGAACTGGCCAGATTGGCAAACTTGAAGATACTCGGAATCGTACTCTGCACGGTATTTTAAGGGTTCAAAGCTGTTTC AGGGGGCATCAAGCCCGTCATCATGCGAGAGAACGAATAAGAGGAGTTTTGGCTCTTCAATCATTCATTCGTGGTGAGAA TGCACGGCAAATTTATTCCTCTTTGTCGAGGAAACATAGAGCAGCAGTTATTTTGCAGAGAAATGTGAGATGTTGGCTCG CAAGAAGGTATTTCATAAAACTCCGGAAGGCCTCGGTAATAATACAGTCTGGTATTCGTGGCAGTCTTGTTCGAAGATGT AATGGAAATATTGATCTAATAAACGTGCTAAGAGAGTTTGAATCAAAACAGGAGGCAGAGGGTGACCAAATTTTGATCAA GGCATCAGTCCTGGCTGAGTTACAGAGGCGGATACTAAAAGCCGAGGCCACAGTTCGTGAAAAGGATGAAGAGAATGAGA TGCTTCATCAGCGGCTTCAGCAATATGAAAACCGCTGGTTAGAGTACGAGCAGAAAATGAAAGCTATGGAGGAAATGTGG CAGAAGCAAATGCGTTCATTGCAATCGAGCCTTTCCGTAGCAAAGAAGAGTCTTGCTCTAGATGAGACGCCTAGGATGTC AGACTCATCAGTGGATCAGAGCTGGGAAAGCAATGGGAATCATGTCAGTAGTGGGTCTCAGCTGGTGCCACGCACTGGTG GGCGTGAAATGAACGCTGGCCTGAGCGTCATTGGCCGCCTAAACGAAGAATTCGAACAACGGAGCCAGGTATTTGCTGAT GACGCCAAGTTCCTGGTTGAGGTCAAGTCTGGGCAGGCGGATGCCAGCCTAAACCCAGACATGGAGCTCCGGAGGTTGAA GCAGAATTTTGACTCGTGGAAGAAGGATTTCAGTGGCCGCATAAGGGAGACAAAGGTGATCCTGAACAAGCTCGGGAATG GCAACGAGTCATCGCCCAACTCTGTGAAGCGGAAATGGTGGGGCAGACTGAACACCTCCAAGTTTTCGTGA |
Sb_1:19549640-19549653:- does not have available information here.