
Microexon ID | Pt_5:6212656-6212669:- |
Species | Populus Trichocarpa | Coordinates | 5:6212656..6212669 |
Microexon Cluster ID | MEP38 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Myosin_head |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CAYTTYARTRMAACTGGRAARATATSTGGTGCYAADATTCAAACWTTTYTRCTTGARAAGTCWAGAGTWGTYCARYKTGCWGAWGGWGARAGRTCATAYCATATWTTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTTACTTGAAAAG |
Microexon Amino Acid seq | FLLEK |
Microexon-tag DNA Seq | CACTTTAGTGAAACTGGAAAAATATCAGGTGCCAAAATTCAAACATTTTTACTTGAAAAGTCCAGAGTCGTCCAATGCATGGAGGGTGAGAGGTCATATCATATATTT |
Microexon-tag Amino Acid Seq | HFSETGKISGAKIQTFLLEKSRVVQCMEGERSYHIF |
Microexon-tag spanning region | 6212529-6212839 |
Microexon-tag prediction score | 0.9627 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Potri.005G089200.2.v4.1x |
Reference Transcript ID | Potri.005G089200.2.v4.1 |
Gene ID | Potri.005G089200.v4.1 |
Gene Name | NA |
Transcript ID | Potri.005G089200.2.v4.1 |
Protein ID | |
Gene ID | Potri.005G089200.v4.1 |
Gene Name | |
Pfam domain motif | Myosin_head |
Motif E-value | 2.10E-245 |
Motif start | 177 |
Motif end | 836 |
Protein seq | >Potri.005G089200.2.v4.1 MLQKKSQVLPSFQSIKSLPVDFRFVGSPTSEQSENANLVNSNTACLSVPEKNDLENGLVEGAEDSVGNDVNEDSPYSQAA ILVEQRPSVGDEDLDTVPTPLPLVSTFHRERRWADTSSYAAKKKLQSWFQLSNGDWELGKILSTSGTESVISPPDGKVLK VKTESLVPANPDILDGVDDLMQLSYLNEPSVLYNLQYRYNRDMIYTKAGPVLVAINPFKEVPLYGNNYIEAYKNKSMESP HVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRF GKLIEIHFSETGKISGAKIQTFLLEKSRVVQCMEGERSYHIFYQLCAGASPKLREKISLKIASEYKYLRQSNCYTITGVD DAERFRGVMEALDIVHVSKEDQESVFAMLAAVLWLGNVSFSIVDNENHVEPLADEGLTTVAKLIGCNVGELKLALSTRKM RVGNDTIVQKLSLSQAIDTRDALAKSIYSCLFDWLVEQVNKSLAVGKRRTGRSISILDIYGFESFERNSFEQFCINYANE RLQQHFNRHLFKLEQEEYIQDGIDWTKVDFDDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFR GERGKAFSVSHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCSCHLPQIFASNMLTQSEKPVVGPLYKAGGADSQKLSVA TKFKGQLFQLMQRLENTTPHFIRCIKPNNSQSPGSYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLE SVAYSQDPLSISVAILHQFDILPEMYQVGYTKLFFRTGQIGVLEDTRNHTLHGILRVQSCFRGHQARAYLRELKRGICVL QSFVRGEKIRKEYAVSQQRHRAAVVIQRHIKSTICGKKYKDMHQASIMIQSVIRGWLVRRFSGDVGLLKSGATKGNESDE VLVKASFLAELQRRVLKAEAALREKEEENDVLHQRLQQYENRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAIDDS ERNSDASVNASDEREFSWDTGSNHRGQESNSARPMSAGLSVISRMAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDRE LRRLKQMFEAWKKDYGSRLRETKVILNKLGTEEGALDRVKRKWWGRRNSTRYT* |
CDS seq | >Potri.005G089200.2.v4.1 ATGTTGCAGAAAAAATCTCAGGTCTTGCCTTCTTTCCAGTCGATCAAATCGTTGCCAGTTGATTTTAGGTTTGTTGGTTC GCCGACATCAGAACAATCAGAAAACGCAAATTTGGTAAATAGCAATACAGCCTGTTTGAGTGTTCCTGAAAAAAATGATC TAGAGAATGGTCTTGTCGAGGGAGCTGAGGATAGTGTTGGCAATGATGTCAATGAGGATTCACCTTACAGTCAAGCTGCC ATCTTGGTTGAACAAAGACCTTCTGTGGGTGATGAAGATTTGGATACTGTGCCCACACCTTTGCCCTTGGTATCAACATT TCACAGGGAGCGCAGGTGGGCTGACACCAGTTCCTATGCTGCAAAAAAGAAACTTCAATCTTGGTTTCAACTTTCAAATG GGGATTGGGAGCTGGGGAAGATTTTATCAACTTCAGGGACCGAGTCTGTCATTTCCCCTCCAGATGGAAAAGTTTTAAAG GTGAAAACTGAGAGTCTTGTTCCAGCAAATCCTGATATCCTTGATGGTGTAGATGATCTCATGCAACTTAGTTACTTAAA TGAGCCATCAGTGCTGTACAATCTTCAGTATAGATACAACCGTGATATGATTTATACAAAAGCAGGGCCAGTTTTGGTTG CCATCAATCCTTTCAAGGAAGTTCCTTTATATGGAAATAATTACATTGAAGCATATAAGAATAAATCTATGGAGAGCCCA CATGTGTATGCCATTACAGACACGGCCATCCGGGAAATGATACGAGATGAAGTAAATCAATCTATCATTATAAGTGGTGA AAGTGGAGCAGGAAAAACAGAGACAGCGAAGATAGCTATGCAATATCTGGCTGCTCTTGGTGGTGGTAGTGGGATAGAAT ATGAAATATTGAAAACGAATCCTATTCTAGAAGCTTTTGGTAATGCAAAGACATTGAGGAATGACAACTCAAGTCGCTTT GGAAAGTTGATTGAAATCCACTTTAGTGAAACTGGAAAAATATCAGGTGCCAAAATTCAAACATTTTTACTTGAAAAGTC CAGAGTCGTCCAATGCATGGAGGGTGAGAGGTCATATCATATATTTTATCAGCTTTGTGCCGGGGCTTCACCTAAACTTA GAGAGAAAATAAGCTTGAAGATTGCAAGTGAATATAAATATTTGAGACAGAGCAATTGCTACACAATTACTGGTGTCGAT GACGCTGAACGCTTCCGTGGTGTTATGGAAGCTCTGGATATTGTTCATGTCAGTAAGGAAGACCAAGAGAGTGTATTTGC AATGCTTGCTGCAGTACTGTGGTTAGGAAATGTCTCGTTTTCCATTGTTGATAATGAAAATCATGTTGAACCTTTGGCAG ATGAAGGTCTAACCACTGTTGCAAAATTGATTGGCTGTAATGTTGGGGAGCTTAAGCTGGCTTTATCTACTCGCAAAATG AGAGTCGGAAATGATACAATTGTCCAAAAGCTATCCTTATCACAGGCAATAGATACAAGAGATGCTCTGGCCAAGTCAAT TTATTCTTGCTTGTTTGATTGGCTTGTTGAACAAGTCAACAAATCACTTGCAGTTGGTAAAAGGAGAACTGGCAGATCCA TCAGCATTCTTGACATTTATGGATTTGAATCATTTGAAAGGAATAGTTTTGAGCAATTCTGCATAAATTATGCAAATGAG AGATTGCAGCAACACTTCAATCGTCATTTATTCAAGTTGGAGCAGGAGGAATACATACAAGATGGCATTGACTGGACCAA GGTTGATTTTGATGATAACCAGGACTGTCTCAATCTTTTTGAAAAGAAACCTTTGGGGTTATTATCTTTGCTGGATGAGG AGTCCACCTTTCCAAATGGCACAGATTTGACATTTGCCAACAAGCTTAAACAGCATTTAAACTCTAATTCTTGTTTCAGA GGAGAGCGAGGCAAAGCCTTCAGTGTCAGCCATTATGCGGGCGAGGTGACTTATGATACAACTGGATTTCTGGAGAAGAA TAGAGACTTATTACACTTGGACTCTATCCAGCTTCTCTCTTCATGTTCATGCCATCTCCCTCAGATATTTGCTTCCAATA TGCTTACACAATCTGAGAAACCTGTAGTCGGTCCTTTATATAAAGCAGGTGGAGCAGATTCACAAAAGCTAAGTGTTGCA ACAAAATTTAAGGGCCAACTGTTCCAATTGATGCAACGTCTAGAGAACACAACACCACATTTCATACGTTGTATAAAGCC TAACAACTCGCAATCTCCTGGATCGTATGAGCAAGGACTTGTATTGCAGCAACTGAGATGTTGTGGAGTTCTTGAAGTAG TTCGTATATCAAGGTCTGGATTTCCTACCAGAATGTCACACCAGAAGTTTGCCAGAAGATATGGTTTTCTTCTGCTGGAA AGTGTTGCTTATTCTCAAGATCCACTGAGTATTTCGGTTGCAATTCTTCATCAGTTCGATATCTTGCCAGAGATGTATCA AGTTGGCTACACAAAATTATTTTTCCGAACAGGACAGATTGGTGTGCTTGAGGATACAAGAAACCACACGCTACATGGTA TTTTACGTGTTCAAAGCTGTTTCAGGGGGCACCAAGCTCGTGCTTACCTCAGGGAGCTCAAAAGAGGAATTTGTGTTCTA CAGTCATTTGTTCGTGGAGAGAAAATCAGAAAGGAATATGCAGTCTCACAACAAAGACATAGAGCAGCCGTTGTTATACA AAGACATATCAAAAGCACAATCTGCGGGAAAAAATACAAAGACATGCATCAAGCATCAATCATGATACAATCAGTTATTC GTGGATGGTTGGTGAGAAGATTTTCGGGTGATGTAGGATTATTGAAATCTGGTGCAACCAAGGGCAATGAGTCAGATGAG GTGCTCGTGAAGGCATCATTTCTTGCTGAATTACAGCGACGTGTTCTCAAAGCTGAAGCTGCTCTTAGAGAGAAAGAGGA GGAGAATGACGTCCTTCACCAACGGCTCCAACAGTATGAGAACCGTTGGTCAGAATATGAGTTGAAAATGAAGTCCATGG AAGAAGTGTGGCAGAAACAGATGAGATCCCTACAATCCAGTCTCTCCATTGCAAAGAAGAGCCTAGCCATTGATGATTCT GAGAGAAATTCTGATGCATCTGTCAATGCAAGTGATGAGAGAGAGTTTAGCTGGGATACAGGAAGCAACCATAGGGGTCA AGAAAGTAACAGTGCTAGACCGATGAGTGCAGGCTTGAGTGTTATAAGCCGTATGGCTGAAGAATTTGAGCAGAGGAGTC AAGTGTTTGGTGATGATGCCAAGTTCTTGGTAGAGGTAAAATCAGGTCAGGTTGAAGCAAGTTTGAACCCTGACCGAGAG CTCAGAAGGTTGAAGCAGATGTTTGAAGCTTGGAAGAAGGATTATGGATCGAGACTACGGGAAACAAAGGTGATTTTGAA TAAGCTCGGAACTGAAGAAGGTGCCCTTGACAGGGTGAAAAGGAAGTGGTGGGGAAGGAGGAACAGCACGAGATATACTT AG |
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