
Microexon ID | Ha_15:24294532-24294545:- |
Species | Helianthus annuus | Coordinates | 15:24294532..24294545 |
Microexon Cluster ID | MEP38 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Myosin_head |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CAYTTYARTRMAACTGGRAARATATSTGGTGCYAADATTCAAACWTTTYTRCTTGARAAGTCWAGAGTWGTYCARYKTGCWGAWGGWGARAGRTCATAYCATATWTTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTCTTCTTGAAAAG |
Microexon Amino Acid seq | LLLEK |
Microexon-tag DNA Seq | AATTACAATGCAAAGGGTATGCTTCACGGGGCTTGTATCCATACACTTCTTCTTGAAAAGTCGAGGATATCGCAACTCAGTCGCAGTGAAAGGTCATACCATGTCTTT |
Microexon-tag Amino Acid Seq | NYNAKGMLHGACIHTLLLEKSRISQLSRSERSYHVF |
Microexon-tag spanning region | 24294400-24294699 |
Microexon-tag prediction score | 0.8623 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OTF94313x |
Reference Transcript ID | OTF94313 |
Gene ID | HannXRQ_Chr15g0470701 |
Gene Name | NA |
Transcript ID | OTF94313 |
Protein ID | OTF94313 |
Gene ID | HannXRQ_Chr15g0470701 |
Gene Name | NA |
Pfam domain motif | Myosin_head |
Motif E-value | 6.7e-17 |
Motif start | 15 |
Motif end | 75 |
Protein seq | >OTF94313 MQKRQETKILADMCGKLIDFNYNAKGMLHGACIHTLLLEKSRISQLSRSERSYHVFYQLCAGASSDMREQCRLQSM* |
CDS seq | >OTF94313 ATGCAAAAACGTCAAGAAACAAAAATTCTAGCCGATATGTGCGGAAAATTAATTGATTTTAATTACAATGCAAAGGGTAT GCTTCACGGGGCTTGTATCCATACACTTCTTCTTGAAAAGTCGAGGATATCGCAACTCAGTCGCAGTGAAAGGTCATACC ATGTCTTTTATCAATTGTGTGCTGGGGCGTCCTCTGATATGAGAGAGCAATGTCGGTTGCAGAGCATGTAA |
Microexon DNA seq | TTCTTCTTGAAAAG |
Microexon Amino Acid seq | LLLEK |
Microexon-tag DNA Seq | AATTACAATGCAAAGGGTATGCTTCACGGGGCTTGTATCCATACACTTCTTCTTGAAAAGTCGAGGATATCGCAACTCAGTCGCAGTGAAAGGTCATACCATGTCTTT |
Microexon-tag Amino Acid seq | NYNAKGMLHGACIHTLLLEKSRISQLSRSERSYHVF |
Transcript ID | OTF94313 |
Gene ID | Ha.22689 |
Gene Name | NA |
Pfam domain motif | Myosin_head |
Motif E-value | 7e-17 |
Motif start | 15 |
Motif end | 75 |
Protein seq | >OTF94313 MQKRQETKILADMCGKLIDFNYNAKGMLHGACIHTLLLEKSRISQLSRSERSYHVFYQLCAGASSDMREQCRLQSM* |
CDS seq | >OTF94313 ATGCAAAAACGTCAAGAAACAAAAATTCTAGCCGATATGTGCGGAAAATTAATTGATTTTAATTACAATGCAAAGGGTAT GCTTCACGGGGCTTGTATCCATACACTTCTTCTTGAAAAGTCGAGGATATCGCAACTCAGTCGCAGTGAAAGGTCATACC ATGTCTTTTATCAATTGTGTGCTGGGGCGTCCTCTGATATGAGAGAGCAATGTCGGTTGCAGAGCATGTAA |