Microexon ID Ha_15:24294532-24294545:-
Species Helianthus annuus
Coordinates 15:24294532..24294545
Microexon Cluster ID MEP38
Size 14
Phase 1
Pfam Domain Motif Myosin_head
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,14,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq CAYTTYARTRMAACTGGRAARATATSTGGTGCYAADATTCAAACWTTTYTRCTTGARAAGTCWAGAGTWGTYCARYKTGCWGAWGGWGARAGRTCATAYCATATWTTT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTCTTCTTGAAAAG
Microexon Amino Acid seq LLLEK
Microexon-tag DNA Seq AATTACAATGCAAAGGGTATGCTTCACGGGGCTTGTATCCATACACTTCTTCTTGAAAAGTCGAGGATATCGCAACTCAGTCGCAGTGAAAGGTCATACCATGTCTTT
Microexon-tag Amino Acid Seq NYNAKGMLHGACIHTLLLEKSRISQLSRSERSYHVF
Microexon-tag spanning region24294400-24294699
Microexon-tag prediction score0.8623
Overlapped with the annotated transcript (%) 100
New Transcript ID OTF94313x
Reference Transcript ID OTF94313
Gene ID HannXRQ_Chr15g0470701
Gene Name NA
Transcript ID OTF94313
Protein ID OTF94313
Gene ID HannXRQ_Chr15g0470701
Gene Name NA
Pfam domain motif Myosin_head
Motif E-value 6.7e-17
Motif start 15
Motif end 75
Protein seq >OTF94313
MQKRQETKILADMCGKLIDFNYNAKGMLHGACIHTLLLEKSRISQLSRSERSYHVFYQLCAGASSDMREQCRLQSM*
CDS seq >OTF94313
ATGCAAAAACGTCAAGAAACAAAAATTCTAGCCGATATGTGCGGAAAATTAATTGATTTTAATTACAATGCAAAGGGTAT
GCTTCACGGGGCTTGTATCCATACACTTCTTCTTGAAAAGTCGAGGATATCGCAACTCAGTCGCAGTGAAAGGTCATACC
ATGTCTTTTATCAATTGTGTGCTGGGGCGTCCTCTGATATGAGAGAGCAATGTCGGTTGCAGAGCATGTAA
Microexon DNA seq TTCTTCTTGAAAAG
Microexon Amino Acid seq LLLEK
Microexon-tag DNA Seq AATTACAATGCAAAGGGTATGCTTCACGGGGCTTGTATCCATACACTTCTTCTTGAAAAGTCGAGGATATCGCAACTCAGTCGCAGTGAAAGGTCATACCATGTCTTT
Microexon-tag Amino Acid seq NYNAKGMLHGACIHTLLLEKSRISQLSRSERSYHVF
Transcript ID OTF94313
Gene ID Ha.22689
Gene Name NA
Pfam domain motif Myosin_head
Motif E-value 7e-17
Motif start 15
Motif end 75
Protein seq >OTF94313
MQKRQETKILADMCGKLIDFNYNAKGMLHGACIHTLLLEKSRISQLSRSERSYHVFYQLCAGASSDMREQCRLQSM*
CDS seq >OTF94313
ATGCAAAAACGTCAAGAAACAAAAATTCTAGCCGATATGTGCGGAAAATTAATTGATTTTAATTACAATGCAAAGGGTAT
GCTTCACGGGGCTTGTATCCATACACTTCTTCTTGAAAAGTCGAGGATATCGCAACTCAGTCGCAGTGAAAGGTCATACC
ATGTCTTTTATCAATTGTGTGCTGGGGCGTCCTCTGATATGAGAGAGCAATGTCGGTTGCAGAGCATGTAA