
Microexon ID | Gm_9:49997340-49997353:+ |
Species | Glycine max | Coordinates | 9:49997340..49997353 |
Microexon Cluster ID | MEP38 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Myosin_head |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CAYTTYARTRMAACTGGRAARATATSTGGTGCYAADATTCAAACWTTTYTRCTTGARAAGTCWAGAGTWGTYCARYKTGCWGAWGGWGARAGRTCATAYCATATWTTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTTGCTTGAGAAG |
Microexon Amino Acid seq | FLLEK |
Microexon-tag DNA Seq | CACTTCAGTGAAACTGGAAAAATCTCCGGTGCTAATATTCAAACATTTTTGCTTGAGAAGTCTAGAGTAGTCCAATGCAATGAAGGGGAAAGATCATATCACATATTT |
Microexon-tag Amino Acid Seq | HFSETGKISGANIQTFLLEKSRVVQCNEGERSYHIF |
Microexon-tag spanning region | 49997161-49997569 |
Microexon-tag prediction score | 0.9749 |
Overlapped with the annotated transcript (%) | 80.56 |
New Transcript ID | KRH40907x |
Reference Transcript ID | KRH40907 |
Gene ID | GLYMA_09G284800 |
Gene Name | NA |
Gm_9:49997340-49997353:+ does not have available information here.
Microexon DNA seq | TTTTGCTTGAGAAG |
Microexon Amino Acid seq | FLLEK |
Microexon-tag DNA Seq | CACTTCAGTGAAACTGGAAAAATCTCCGGTGCTAATATTCAAACATTTTTGCTTGAGAAGTCTAGAGTAGTCCAATGCAATGAAGGGGAAAGATCATATCACATATTT |
Microexon-tag Amino Acid seq | HFSETGKISGANIQTFLLEKSRVVQCNEGERSYHIF |
Transcript ID | Gm.54562.1 |
Gene ID | Gm.54562 |
Gene Name | NA |
Pfam domain motif | Myosin_head |
Motif E-value | 9.8e-246 |
Motif start | 182 |
Motif end | 840 |
Protein seq | >Gm.54562.1 MSGTSKVLPALHSIKSLPPKFKITTGNPTSGLMENHGVAKLRSSDVIGSGSPENDALIGEVAEEARDCVADVGVYDEDLV YSRKCVSLEDRPSIADEDLESVPLSFPSISISSGERRWSDTTPYASKKKLQSWFQLPNGNWELGKIITTSGNESIISLPD RKVLKVKEESLVPANPDILDGVDDLMQLSYLNEPSVLYNLRYRYNQNMIYTKAGPVLVAINPFKKVPLYGNDYIEAYKRK AIESPHVYAIADTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRND NSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPPSLRGKLNLQNAEDYKYLRQSNCYS ISGVNDADEFRTVMEALDVVHIRKEDQENVFAMLAAVLWLGNISFTVIDNENHVQAVEDEGLFHVAKLIGCDIEDLKLIL STRKMKVGNDNIVQKLTLSQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCI NYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKRPLGLLSLLDEESTFPNGTDLTFANKLKQHLNS NSCFKGERDQAFTVHHYAGQVTYDTTGFLEKNRDLLHLDSIQLLSSCTCPLPQIFASHMLTQSDKPAVGPLHKSGGADSQ KLSVATKFKGQLFRLMQQLESTTPHFIRCIKPNNLQSPESYEQGLVLQQLRCCGVLEVVRISRSGFPTRMFHQKFARRYG FLLLDHVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGYQARHSLKDLRGG ITTLQSFIRGDKTRKAYSALLKRHRAAVIIQKRIKAVFARNRMRTISDAAIVIQAVIHGWLVRRCSGNIGFLKSGDMKMK ESDEVLVKSSFLAELQCRVLKAEAALREKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLA IDDSERNSDASVNASDERDYSWDVGGNHKRQESNGARSTSAGLSVISRLAEEFEHRSQVFGDDAKFLVEVKSGQVEASLN PDQELRRLKQMFEAWKKDYGARLRETKVIINKLGSEDGALEKMKKKWWGRRNSTRIN* |
CDS seq | >Gm.54562.1 ATGTCTGGGACATCCAAGGTTCTGCCTGCTCTCCACTCTATCAAATCGTTGCCTCCCAAGTTCAAGATTACCACTGGTAA TCCGACTTCTGGTCTAATGGAAAACCACGGAGTTGCTAAGCTGAGAAGCAGTGATGTGATCGGATCAGGTAGTCCAGAAA ACGATGCTTTGATAGGGGAGGTTGCTGAGGAAGCTCGGGACTGTGTTGCTGACGTGGGTGTTTACGATGAGGACTTGGTG TACAGCAGAAAATGTGTGTCGTTAGAAGACAGGCCATCAATTGCTGATGAAGACTTAGAATCTGTTCCTCTGTCCTTCCC ATCAATTTCAATCTCCTCTGGGGAACGCAGGTGGAGTGATACGACACCTTATGCTTCAAAGAAGAAGCTTCAGTCTTGGT TTCAACTTCCAAATGGGAATTGGGAGCTGGGGAAGATAATAACAACTTCTGGAAATGAATCCATCATTTCACTGCCTGAC AGGAAGGTTTTGAAAGTGAAAGAAGAAAGTTTAGTACCAGCAAATCCTGATATCCTTGATGGGGTGGATGACCTCATGCA ACTTAGTTATTTAAATGAACCGTCAGTTTTATACAACCTGCGATATAGATACAATCAAAACATGATTTATACAAAAGCAG GGCCTGTTTTGGTTGCTATAAATCCCTTTAAGAAAGTTCCTCTATATGGTAATGATTATATTGAAGCCTACAAGCGTAAA GCAATTGAAAGCCCTCATGTATATGCAATAGCAGACACGGCCATCCGGGAAATGATACGAGATGAAGTTAATCAATCTAT AATTATAAGTGGTGAGAGTGGAGCAGGGAAGACTGAGACAGCAAAAATAGCAATGCAGTACTTGGCTGCCCTTGGTGGTG GAAGTGGAATAGAGTATGAGATTTTAAAGACTAATCCAATACTAGAAGCCTTTGGTAATGCAAAAACATTGAGAAATGAC AACTCAAGTCGTTTTGGAAAGCTCATTGAGATTCACTTCAGTGAAACTGGAAAAATCTCCGGTGCTAATATTCAAACATT TTTGCTTGAGAAGTCTAGAGTAGTCCAATGCAATGAAGGGGAAAGATCATATCACATATTTTATCAGCTATGTGCTGGTG CACCTCCATCTCTCAGGGGAAAGCTAAACCTACAAAATGCAGAAGACTATAAATATCTGAGGCAGAGCAATTGTTATTCA ATTAGTGGTGTTAATGATGCAGACGAATTTCGCACAGTCATGGAAGCTCTAGATGTTGTCCACATCAGAAAAGAAGACCA GGAGAATGTATTTGCAATGCTTGCTGCAGTATTATGGTTAGGAAACATATCATTTACTGTGATTGATAATGAAAATCATG TTCAAGCTGTAGAAGATGAGGGTCTGTTCCATGTAGCCAAATTGATTGGCTGTGACATCGAAGATCTCAAGTTGATACTA TCAACTCGCAAAATGAAAGTTGGTAATGATAATATTGTCCAAAAGTTGACGCTATCACAGGCAATTGATGCAAGAGATGC TTTGGCAAAGTCAATATATGCATGCCTGTTTGATTGGTTGGTTGAACAGATAAATAAATCACTTGCTGTTGGCAAAAGAC GTACCGGCAGATCAATCAGTATTCTAGATATCTATGGCTTTGAATCTTTCAATAGGAACAGTTTTGAGCAGTTCTGCATA AATTATGCAAATGAGAGATTACAGCAACACTTTAATCGTCATTTATTCAAGTTAGAACAGGAGGAATATATTCAAGATGG CATTGACTGGGCTAAAGTTGAATTTGAAGACAACCAAGACTGCCTTAATCTTTTTGAGAAGAGGCCACTGGGGTTATTAT CCTTGTTAGATGAAGAGTCCACTTTCCCAAATGGCACAGATTTAACATTTGCTAACAAGCTTAAACAGCATTTGAATTCT AATTCATGTTTCAAAGGAGAAAGAGACCAAGCCTTTACTGTACACCATTATGCTGGGCAGGTAACCTATGATACAACTGG ATTTCTGGAGAAAAACAGAGACCTATTGCACTTGGATTCCATCCAACTTCTATCCTCTTGCACGTGTCCTCTTCCTCAAA TATTTGCATCTCATATGCTCACTCAGTCTGATAAGCCGGCAGTTGGTCCCTTACACAAGTCAGGTGGGGCAGATTCCCAA AAGCTAAGTGTTGCAACAAAATTCAAGGGTCAATTGTTCCGACTGATGCAACAACTAGAGAGTACTACTCCACATTTTAT TCGCTGCATTAAACCGAATAATCTCCAATCACCTGAATCATATGAGCAAGGGCTTGTATTGCAGCAGCTGAGATGCTGTG GGGTCCTGGAAGTAGTTCGAATATCGAGATCTGGCTTTCCAACAAGAATGTTTCACCAAAAGTTTGCTAGAAGATATGGT TTTCTCCTCCTTGATCATGTTGCTTCTCAGGATCCGCTTAGTGTTTCAGTTGCAATTCTTCATCAGTTTAATATTTTGCC TGAGATGTATCAAGTTGGCTACACAAAATTATTTTTCCGAACAGGGCAGATTGGTGTGCTTGAAGATACTAGAAATCGTA CCCTCCATGGCATTTTACGTGTCCAAAGTTGTTTCAGGGGTTACCAAGCACGTCATTCTCTCAAGGATCTTCGGGGAGGA ATCACTACTTTGCAGTCATTTATTAGGGGAGACAAAACCAGAAAGGCATATTCAGCATTACTTAAGAGGCATAGAGCTGC TGTTATTATACAGAAGCGCATCAAAGCAGTATTTGCAAGAAACAGAATGAGGACTATTAGTGATGCTGCAATAGTCATAC AAGCAGTTATTCATGGTTGGTTGGTCAGAAGATGCTCAGGAAATATTGGATTTTTGAAATCTGGAGACATGAAGATGAAA GAGTCAGATGAGGTTCTGGTTAAGTCATCTTTCCTGGCCGAATTACAGTGCCGGGTACTTAAGGCTGAAGCTGCCCTTAG AGAGAAAGAAGAGGAAAATGACATCCTTCATCAACGTCTCCAACAATATGAGAGCAGATGGTCTGAGTATGAATTAAAAA TGAAATCCATGGAAGAAGTGTGGCAGAAACAAATGAGATCCCTACAATCTAGCCTCTCCATTGCAAAGAAGAGCCTTGCT ATCGATGACTCTGAAAGAAATTCAGACGCATCTGTTAATGCAAGTGATGAGCGGGATTACAGCTGGGATGTGGGAGGTAA TCACAAGCGCCAAGAAAGCAATGGGGCAAGATCAACGAGTGCTGGTTTAAGTGTTATAAGTCGGCTGGCTGAAGAATTTG AGCATAGGAGTCAAGTATTTGGTGATGATGCCAAGTTCTTGGTTGAGGTAAAATCTGGTCAGGTAGAAGCAAGTTTGAAC CCAGATCAAGAGCTTAGAAGGTTAAAACAGATGTTTGAAGCTTGGAAAAAGGATTATGGGGCAAGACTGCGTGAAACAAA AGTCATTATAAATAAACTTGGAAGCGAAGATGGCGCACTTGAGAAAATGAAGAAAAAGTGGTGGGGAAGAAGGAATAGTA CAAGGATAAATTGA |