Microexon ID Gm_15:33543228-33543241:-
Species Glycine max
Coordinates 15:33543228..33543241
Microexon Cluster ID MEP38
Size 14
Phase 1
Pfam Domain Motif Myosin_head
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,14,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq CAYTTYARTRMAACTGGRAARATATSTGGTGCYAADATTCAAACWTTTYTRCTTGARAAGTCWAGAGTWGTYCARYKTGCWGAWGGWGARAGRTCATAYCATATWTTT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTCTGTTAGAAAAG
Microexon Amino Acid seq FLLEK
Microexon-tag DNA Seq CATTTCAGCACAATGGGGAAAATTTGTGGGGCAAAAATTCAAACTTTTCTGTTAGAAAAGTCAAGAGTTGTTCAACTTGCCTTGGGCAAGAGGTCATATCTCATATTT
Microexon-tag Amino Acid Seq HFSTMGKICGAKIQTFLLEKSRVVQLALGKRSYLIF
Microexon-tag spanning region33543090-33543438
Microexon-tag prediction score0.9294
Overlapped with the annotated transcript (%) 42.59
New Transcript ID KRH13051x
Reference Transcript ID KRH13051
Gene ID GLYMA_15G213000
Gene Name NA
Gm_15:33543228-33543241:- does not have available information here.
Microexon DNA seq TTCTGTTAGAAAAG
Microexon Amino Acid seq FLLEK
Microexon-tag DNA Seq CATTTCAGCACAATGGGGAAAATTTGTGGGGCAAAAATTCAAACTTTTCTGTTAGAAAAGCTGTAA
Microexon-tag Amino Acid seq HFSTMGKICGAKIQTFLLEKL*
Transcript ID Gm.18632.4
Gene ID Gm.18632
Gene Name NA
Pfam domain motif Myosin_head
Motif E-value 9.4e-58
Motif start 1
Motif end 145
Protein seq >Gm.18632.4
MIYSKSGPTLIALNPFKDVQIYGDDYISAYRQKLMDRPHVYAMADAAYNEMMRDEANQSIIISGESGSGKTETAKIVMQY
LAALGGGCSGIENEVLLTNFILEAFGNAKTSKNDNSSRFGKLIEIHFSTMGKICGAKIQTFLLEKL*
CDS seq >Gm.18632.4
ATGATTTACAGTAAATCAGGGCCAACTTTAATTGCACTCAATCCTTTTAAAGATGTTCAAATTTATGGAGATGATTATAT
TTCAGCTTATAGGCAGAAACTTATGGATAGGCCTCATGTTTATGCTATGGCAGATGCAGCATATAATGAGATGATGAGAG
ATGAAGCGAATCAGTCCATTATCATAAGTGGTGAGAGTGGATCTGGGAAAACAGAGACAGCAAAAATTGTTATGCAATAC
TTAGCTGCTCTTGGTGGTGGCTGTTCTGGAATAGAAAATGAAGTTCTCTTGACAAACTTTATACTAGAAGCTTTTGGGAA
TGCAAAAACATCTAAGAATGACAACTCTAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGCACAATGGGGAAAATTT
GTGGGGCAAAAATTCAAACTTTTCTGTTAGAAAAGCTGTAA