| Microexon ID | Bn_scaffoldC06:11274172-11274185:+ |
| Species | Brassica Napus | Coordinates | scaffoldC06:11274172..11274185 |
| Microexon Cluster ID | MEP38 |
| Size | 14 |
| Phase | 1 |
| Pfam Domain Motif | Myosin_head |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | CAYTTYARTRMAACTGGRAARATATSTGGTGCYAADATTCAAACWTTTYTRCTTGARAAGTCWAGAGTWGTYCARYKTGCWGAWGGWGARAGRTCATAYCATATWTTT |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TTTTACTAGAAAAG |
| Microexon Amino Acid seq | FLLEK |
| Microexon-tag DNA Seq | CATTTTAGTGAAACAGGAAAAATATCCGGTGCTAAAGTCCAAACATTTTTACTAGAAAAGTCTAGAGTGGTTCAATGTGCGAAAGGAGAAAGGTCATATCATATATTT |
| Microexon-tag Amino Acid Seq | HFSETGKISGAKVQTFLLEKSRVVQCAKGERSYHIF |
| Microexon-tag spanning region | 11274025-11274321 |
| Microexon-tag prediction score | 0.9681 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaC06T0047200ZSx |
| Reference Transcript ID | BnaC06T0047200ZS |
| Gene ID | BnaC06G0047200ZS |
| Gene Name | NA |
| Transcript ID | BnaC06T0047200ZS |
| Protein ID | |
| Gene ID | BnaC06G0047200ZS |
| Gene Name | |
| Pfam domain motif | Myosin_head |
| Motif E-value | 3.70E-246 |
| Motif start | 156 |
| Motif end | 814 |
| Protein seq | >BnaC06T0047200ZS MSHKVKPSVQSLKSMPADYRFLGSPPLSDTLENSSSGSSVSVTIPRNGHLKNGFKGTRDSVGGVDNGNEDSPYSVSNEDP VVPLPRSTDRRWSDTSVYARKKVLQFWVQLPCGNWELGKVLSTSGEESVVKLPEGNVLKVMSETLVPANPDILDGVDDLM QLSYLNEPAVLYNLEYRYNQDMIYTKAGPVLVAVNPFKEVPLYGNSNIEAYRKRSNESPHVYAIADTAIREMIRDEVNQS IIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGAKVQT FLLEKSRVVQCAKGERSYHIFYQLCAGASPRLREKLNLTSAEEYKYLQQSNCYSINGVDDAERFQAVTEALDIVHVSKED QESVFAMLAAVLWLGNVSFTVIDNENHVEPEEDESLSTVAKLIGCNINELKLALSNRNMKVRNDTIIQKLTLSQAIDARD ALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFDKNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQD GIDWTRVDFEDNQNCLSLFEKKPLGLLSLLDEESTFPNGTDLTLANKLKEHLSANSCFRGDRGKTFTVSHYAGEVTYETT GFLEKNRDLLHSDSIKLLSSCSCHLPQAFASSMLIHSEKPVVGPLYKAGGADSQRLSVATKFKDQLFQLMQRLGNTTPHF IRCIKPNNVQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFSRRYGFLLLESIAAKDPLSVSVAILHQFNIL PEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRLQSCFRGHQARSRLREHKRRVTVLQSFVRGEKVRKEYTELLRRHRA YSAIQSHVKRRIAKRQYKATVDASVVIQSAIRGELVRRCAGDIGWLKSGGTKRNESDEVLVKASVISELQRRVLKSEAAL REKEEENDILRQRLQQYDNRWSEYETKMKSMEEIWQKQMRSLQSSLSIAKKSLEVEDSARNSDASVNASDATELSGSGGD FRTHGRTRSVGVGLSVISRLAEEFGQRAQVFGDDTKFLMEVKSGQVEANLDPERELRRLKQMFDTWKKDYGGRLRETKLI LGKLGSGESGGSAERVKMKWWGRLKSTRF* |
| CDS seq | >BnaC06T0047200ZS ATGTCCCACAAGGTTAAACCATCTGTTCAGTCACTTAAATCGATGCCGGCGGACTATAGATTTCTTGGTTCACCACCACT CTCTGATACCCTTGAAAACTCCTCCTCTGGATCAAGTGTTTCTGTGACCATTCCACGAAATGGTCACTTGAAGAATGGGT TCAAGGGAACTAGAGATTCTGTTGGGGGAGTGGATAATGGTAATGAAGATTCACCATATAGCGTTTCAAATGAAGATCCT GTTGTGCCCTTGCCTCGGAGTACTGATCGCAGGTGGAGCGACACAAGCGTATATGCTCGGAAGAAGGTACTGCAATTTTG GGTCCAACTTCCATGTGGTAACTGGGAGCTGGGGAAGGTGTTGTCAACTTCAGGAGAAGAGTCTGTTGTTAAACTACCTG AGGGAAATGTGTTAAAAGTCATGTCAGAGACTCTAGTACCTGCAAATCCTGATATACTTGATGGAGTAGACGATCTCATG CAACTGAGTTACTTAAATGAACCAGCAGTGTTATACAACCTTGAGTATAGGTACAACCAAGACATGATCTATACAAAAGC AGGGCCCGTTCTAGTGGCTGTGAATCCCTTCAAAGAGGTTCCTTTGTATGGAAATAGCAACATTGAAGCATACAGGAAAA GATCAAATGAGAGCCCTCATGTCTATGCTATTGCTGATACAGCTATCCGTGAAATGATACGAGATGAAGTTAACCAATCC ATCATTATAAGTGGAGAGAGTGGAGCAGGGAAAACTGAGACAGCAAAGATAGCAATGCAGTACCTGGCTGCTCTTGGAGG TGGAAGTGGGATCGAGTATGAGATATTAAAGACTAATCCCATCTTGGAAGCATTTGGGAATGCAAAAACATTGAGAAACG ATAATTCTAGTCGTTTTGGGAAGCTGATAGAGATTCATTTTAGTGAAACAGGAAAAATATCCGGTGCTAAAGTCCAAACA TTTTTACTAGAAAAGTCTAGAGTGGTTCAATGTGCGAAAGGAGAAAGGTCATATCATATATTTTATCAGCTTTGTGCTGG AGCTTCACCTAGGCTTAGAGAGAAGCTAAATTTGACAAGCGCAGAAGAGTATAAATATTTGCAACAAAGCAATTGTTATT CAATTAACGGAGTTGATGACGCTGAACGTTTTCAAGCTGTCACGGAAGCTCTAGACATTGTGCACGTTAGTAAAGAAGAT CAAGAAAGCGTGTTTGCAATGCTTGCAGCAGTACTATGGCTGGGGAATGTTTCTTTCACCGTTATTGACAATGAAAACCA CGTTGAACCTGAGGAAGATGAAAGTTTGTCAACTGTTGCTAAATTGATTGGATGCAACATCAATGAGCTAAAGCTAGCTC TATCGAATCGTAATATGAAAGTTAGAAATGACACAATTATACAGAAGCTAACACTATCGCAGGCAATTGACGCAAGAGAT GCTTTAGCAAAGTCAATATATGCCTGCCTATTTGACTGGCTGGTTGAACAGATAAACAAATCTCTTGCGGTGGGAAAAAG GAGGACTGGCAGATCCATCAGCATTCTGGATATCTATGGCTTTGAATCATTTGATAAGAACAGTTTTGAACAGTTCTGTA TAAATTATGCAAATGAGAGATTGCAGCAACACTTTAATCGTCATCTATTCAAGCTGGAGCAGGAGGAATATATACAGGAT GGTATTGACTGGACAAGGGTTGATTTTGAGGACAACCAAAATTGTCTCAGTCTCTTTGAAAAGAAACCATTAGGTCTGCT CTCGCTTCTGGATGAAGAATCCACATTTCCTAATGGCACAGATCTGACACTTGCAAACAAGCTTAAGGAACACCTAAGTG CTAATTCCTGTTTTAGAGGAGATCGAGGGAAGACTTTTACGGTTTCTCATTATGCTGGAGAGGTTACATATGAGACAACT GGATTTCTAGAGAAGAACCGGGATTTGCTGCATTCAGATTCAATTAAGCTCTTGTCATCTTGCTCTTGCCACCTTCCACA AGCCTTCGCTTCTAGCATGCTCATTCATTCTGAAAAACCTGTTGTTGGTCCTTTATACAAAGCAGGTGGAGCTGACTCTC AGCGACTAAGTGTAGCAACTAAATTTAAGGATCAACTTTTCCAATTGATGCAACGTCTAGGCAACACAACACCGCATTTC ATTCGCTGCATAAAGCCAAACAATGTTCAGTCTCCCGGGTTGTATGAGCAAGGTCTTGTCTTACAGCAGCTAAGATGTTG TGGCGTCCTAGAGGTGGTTAGAATCTCCCGGTCTGGATTTCCTACCAGGATGTCTCATCAGAAATTTTCCCGAAGGTATG GTTTCCTTCTGCTGGAGAGCATCGCAGCAAAAGATCCTCTTAGTGTTTCGGTTGCAATTCTTCATCAGTTCAACATCTTG CCAGAGATGTATCAAGTCGGCTACACAAAACTGTTTTTCAGAACTGGCCAGATTGGGGTTCTTGAAGATACAAGGAATCG CACTCTTCATGGGATCTTACGTCTCCAAAGCTGTTTTAGAGGGCACCAAGCACGGAGTCGTCTAAGAGAGCATAAAAGAA GAGTTACCGTTCTTCAATCATTTGTTCGTGGAGAAAAGGTAAGAAAGGAATACACAGAGTTACTTCGGAGGCATAGAGCT TATTCTGCTATACAAAGCCATGTTAAGAGAAGAATTGCTAAGAGACAGTATAAAGCCACAGTTGATGCATCTGTTGTAAT ACAGTCAGCAATTCGTGGCGAGCTGGTTAGAAGATGTGCTGGGGATATTGGTTGGCTAAAATCTGGAGGCACCAAGAGAA ATGAGTCAGACGAGGTGCTGGTGAAGGCATCAGTAATTTCAGAACTTCAGCGCAGGGTTCTGAAAAGCGAAGCTGCTCTC CGTGAGAAAGAAGAGGAGAACGACATTCTCCGACAAAGACTGCAGCAGTACGACAACAGGTGGTCTGAATACGAAACAAA GATGAAATCAATGGAAGAGATTTGGCAAAAGCAGATGAGATCATTGCAGTCAAGTCTTTCCATTGCAAAGAAAAGCCTAG AGGTTGAGGACTCGGCTAGAAACTCTGATGCGTCGGTGAACGCAAGCGACGCAACGGAGTTATCAGGAAGTGGCGGTGAT TTCAGGACACATGGGAGGACAAGAAGTGTTGGTGTGGGTTTAAGCGTGATAAGCCGGTTAGCAGAAGAGTTCGGACAGAG AGCTCAGGTGTTTGGTGATGACACAAAGTTCTTGATGGAAGTGAAGTCTGGTCAGGTGGAGGCGAACTTGGATCCGGAGA GGGAGCTAAGAAGGTTGAAACAGATGTTTGACACGTGGAAGAAGGATTATGGAGGGAGATTAAGGGAAACGAAACTGATA CTTGGCAAACTTGGGAGTGGGGAAAGTGGTGGTTCAGCGGAGAGAGTGAAGATGAAGTGGTGGGGGAGGTTGAAAAGTAC CAGGTTTTAA |
Bn_scaffoldC06:11274172-11274185:+ does not have available information here.