| Microexon ID | Bn_scaffoldC05:44647412-44647425:- |
| Species | Brassica Napus | Coordinates | scaffoldC05:44647412..44647425 |
| Microexon Cluster ID | MEP38 |
| Size | 14 |
| Phase | 1 |
| Pfam Domain Motif | Myosin_head |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | CAYTTYARTRMAACTGGRAARATATSTGGTGCYAADATTCAAACWTTTYTRCTTGARAAGTCWAGAGTWGTYCARYKTGCWGAWGGWGARAGRTCATAYCATATWTTT |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TCTTACTAGAAAAG |
| Microexon Amino Acid seq | FLLEK |
| Microexon-tag DNA Seq | CATTTTAGTGAAAGCGGAAAGATATCGGGTGCTCAAGTTCAAACCTTCTTACTAGAAAAGTCTAGAGTGGTCCAATGTGCTGAAGGAGAAAGGTCATACCATATATTT |
| Microexon-tag Amino Acid Seq | HFSESGKISGAQVQTFLLEKSRVVQCAEGERSYHIF |
| Microexon-tag spanning region | 44647269-44647576 |
| Microexon-tag prediction score | 0.9659 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaC05T0393600ZSx |
| Reference Transcript ID | BnaC05T0393600ZS |
| Gene ID | BnaC05G0393600ZS |
| Gene Name | NA |
| Transcript ID | BnaC05T0393600ZS |
| Protein ID | |
| Gene ID | BnaC05G0393600ZS |
| Gene Name | |
| Pfam domain motif | Myosin_head |
| Motif E-value | 1.70E-243 |
| Motif start | 158 |
| Motif end | 816 |
| Protein seq | >BnaC05T0393600ZS MAQKVSPSMQSLKSLPADYRFDGENSSFGLTNSSIPRQGGLRNGVSQADTAAGDSDDSPYSSRHGVSVEEQSLTDDVEPG AATMPLPQNDERRWSDTSAYARKKILQSWVQLPNGNWELGKILSTSGEESVISLPEGKVMKVISETLVPANPDILDGVDD LMQLSYLNEPSVLYNLNYRYNQDMIYTKAGPVLVAVNPFKEVPLYGNRYIEAYRKKSNESPHVYAIADTAIREMIRDEVN QSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSESGKISGAQV QTFLLEKSRVVQCAEGERSYHIFYQLCAGASPALREKLNLTSAHEYKYLGQSNCYSINGVDDAERFHSVKEALDIVHVSK EDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADESLSTVAKLIGCNINELKLSLSKRNMRVGKDTIVQKLTLPQAIDA RDALAKSVYSCLFDWLVEQINESLAVGKRRTGRSISILDIYGFESFDKNSFEQFCINYANERLQQHFNRHLFKLEQEEYI QDGIDWTRVDFEDNQDCLSLFEKKPLGLLSLLDEESTFPNGTDLTLANKLKQHLHSNSCFRGDREKLFTVVHYAGEVTYD TTGFLEKNRDLLHLDSIQLLSSCSCHLPRAFASSMLIQSEKPVVGPLYKAGGADSQRLSVATKFKGQLFQLMQRLGNTTP HFIRCIKPNNVQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRVSHQKFARRYGFLLVENIADKDPLSVSVAILHQFN ILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSSFRGYQARCHLKKLKMGISILQSFVRGDKVRKEFAELRRRH RAAATIQSQVKSKIARKQYKGITEASLVIQSAIRGWLVRRCSGDIGWLKSGGTKTNESGEVLVKASVLSDLQRRVLKSEA ALREKEEENDILQQRLQQYENRWSEYETKMKSMEEIWQKQMRSLQSSLSIAKKSLAVEDSARNSDASVNASDATDWDSSS NQFKSQASNGGGGRQQQQPMSAGLSVIGRLAEEFEQRAQVFGDDAKFLVEVKSGQVEANLNPERELRRLKQMFETWKKDY GGRLRETKMILSKLGSEESGGSMEKVKRKWWGRRNSTRY* |
| CDS seq | >BnaC05T0393600ZS ATGGCCCAAAAGGTATCTCCATCCATGCAGTCTCTTAAATCTTTGCCCGCAGACTACAGATTTGATGGTGAAAATTCTAG TTTTGGCTTGACCAATTCTAGTATTCCAAGACAAGGTGGTTTAAGGAATGGTGTTAGTCAAGCTGATACTGCAGCTGGAG ATAGTGATGATTCACCATATAGTAGTAGGCATGGTGTTTCTGTTGAAGAGCAGTCTTTAACTGATGATGTGGAGCCTGGT GCTGCTACAATGCCCTTACCTCAGAATGATGAACGCAGGTGGAGCGACACTAGTGCATATGCAAGGAAGAAGATACTGCA ATCTTGGGTTCAACTTCCAAATGGTAACTGGGAGCTTGGGAAGATACTGTCAACTTCAGGAGAAGAGTCTGTTATCTCTT TGCCTGAGGGAAAAGTTATGAAAGTTATATCAGAGACTCTGGTACCTGCAAATCCTGATATTCTTGATGGAGTGGATGAT CTAATGCAACTAAGTTACTTAAATGAGCCATCAGTGTTGTACAATCTCAACTATAGGTACAACCAAGACATGATATATAC AAAAGCAGGGCCAGTTTTGGTGGCTGTGAATCCTTTCAAGGAGGTTCCTTTGTATGGAAATCGATACATAGAAGCATACA GGAAGAAATCAAATGAAAGTCCTCATGTGTATGCAATTGCAGATACAGCAATTCGTGAAATGATACGCGATGAGGTTAAC CAATCTATCATTATCAGCGGCGAGAGTGGAGCAGGGAAAACTGAGACAGCTAAGATAGCTATGCAATACTTGGCTGCTCT TGGAGGTGGAAGCGGGATTGAATATGAGATACTTAAGACTAATCCCATTTTGGAAGCATTTGGAAATGCAAAAACTTTGA GAAATGATAACTCTAGTCGTTTTGGAAAGCTGATAGAGATTCATTTTAGTGAAAGCGGAAAGATATCGGGTGCTCAAGTT CAAACCTTCTTACTAGAAAAGTCTAGAGTGGTCCAATGTGCTGAAGGAGAAAGGTCATACCATATATTTTACCAACTTTG TGCTGGGGCTTCACCTGCACTTAGAGAGAAGCTAAATCTGACAAGCGCACATGAGTACAAATATTTGGGACAGAGTAATT GTTATTCAATCAATGGAGTTGATGATGCTGAACGTTTTCATAGTGTTAAGGAAGCTCTGGACATTGTTCATGTTAGTAAA GAAGATCAAGAAAGTGTGTTCGCAATGCTTGCTGCAGTGTTATGGCTGGGGAATGTTTCCTTCACCGTTATTGACAATGA AAACCATGTTGAGCCTGTGGCAGATGAAAGTTTGTCAACTGTTGCTAAATTAATTGGGTGCAACATCAATGAGCTTAAGC TAAGTTTATCGAAACGTAACATGAGAGTTGGAAAAGATACCATTGTGCAGAAGCTAACACTACCGCAGGCCATTGATGCA AGAGATGCTTTAGCAAAATCGGTTTATTCGTGCCTGTTTGACTGGCTGGTTGAACAGATCAACGAGTCTCTTGCAGTGGG GAAGAGGCGAACTGGCAGATCCATCAGCATTCTTGATATCTATGGCTTCGAATCATTTGATAAAAATAGTTTTGAGCAGT TCTGTATAAATTATGCAAATGAGAGATTACAGCAACACTTTAACCGTCATCTATTCAAGCTGGAGCAAGAGGAATATATC CAGGATGGTATCGACTGGACAAGGGTTGATTTTGAAGACAACCAAGATTGTCTCAGTCTCTTTGAAAAGAAACCATTGGG GCTGCTTTCTCTTTTGGACGAGGAATCAACATTTCCGAATGGCACAGATCTGACACTTGCAAACAAGTTAAAACAGCATC TTCACTCTAATTCATGTTTCAGAGGAGATCGAGAGAAGCTTTTCACAGTTGTGCATTATGCAGGAGAGGTTACATATGAC ACAACAGGATTTCTAGAGAAGAACAGAGACCTGTTGCACTTGGATTCTATTCAGCTTTTGTCCTCTTGCTCCTGCCACCT TCCTCGAGCGTTTGCTTCTAGCATGCTGATCCAATCTGAAAAACCTGTAGTCGGTCCTTTGTACAAAGCAGGTGGTGCTG ATTCCCAGCGGTTGAGTGTAGCTACCAAATTTAAGGGTCAACTATTCCAATTGATGCAACGTTTAGGGAACACTACCCCA CATTTCATTCGTTGCATCAAGCCAAATAACGTTCAGTCTCCAGGGTTGTATGAGCAAGGACTTGTCTTACAGCAGCTAAG ATGTTGTGGGGTCTTAGAAGTTGTTCGAATCTCACGGTCTGGATTTCCTACAAGAGTGTCTCATCAGAAATTTGCCAGAA GGTATGGTTTCCTTCTGGTGGAGAACATTGCTGATAAAGATCCTCTAAGTGTCTCAGTTGCGATCCTCCATCAGTTCAAT ATCTTGCCGGAGATGTACCAAGTTGGCTACACGAAGTTGTTTTTCAGAACCGGCCAGATTGGGGTTCTTGAAGATACAAG GAACCGTACACTCCATGGCATTTTACGTGTACAAAGCTCTTTTAGAGGATACCAAGCACGTTGTCACCTGAAGAAGCTTA AAATGGGAATTTCTATTCTCCAGTCATTTGTTCGTGGAGATAAAGTAAGAAAGGAGTTTGCCGAGTTACGAAGGAGGCAT AGGGCTGCAGCTACTATACAAAGCCAAGTTAAAAGCAAGATTGCTAGGAAACAGTATAAGGGCATAACAGAAGCTTCTCT TGTGATACAATCAGCAATTCGTGGTTGGTTGGTTAGAAGATGCTCAGGGGACATTGGATGGTTAAAATCTGGAGGCACTA AGACAAATGAGTCAGGCGAGGTGCTAGTAAAGGCATCTGTACTTTCCGACCTTCAACGCAGGGTACTCAAATCGGAAGCT GCTCTGCGTGAGAAAGAAGAGGAGAACGACATTCTTCAGCAGAGGCTTCAACAGTACGAGAACCGTTGGTCAGAGTACGA GACAAAGATGAAATCAATGGAAGAAATCTGGCAGAAGCAAATGCGGTCATTGCAATCTAGCCTCTCCATAGCAAAGAAAA GCCTAGCGGTCGAGGACTCTGCTAGAAACTCGGATGCATCGGTCAATGCAAGCGACGCAACGGATTGGGATTCAAGCAGT AATCAGTTCAAGAGTCAGGCAAGCAACGGAGGAGGGGGGAGACAACAACAACAGCCTATGAGTGCTGGTCTTAGTGTGAT TGGACGGTTGGCGGAGGAGTTTGAACAGAGAGCTCAAGTTTTTGGTGATGATGCTAAGTTCTTGGTGGAAGTGAAGTCTG GTCAGGTGGAAGCAAACTTGAACCCGGAGAGAGAGCTGAGGAGGTTGAAACAGATGTTTGAGACGTGGAAGAAGGATTAT GGAGGGAGGTTGAGGGAAACGAAGATGATACTGAGCAAACTTGGGAGTGAAGAGAGTGGCGGTTCGATGGAGAAGGTGAA GAGGAAGTGGTGGGGAAGGAGGAATAGCACTAGGTATTGA |
Bn_scaffoldC05:44647412-44647425:- does not have available information here.