| Microexon ID | Bn_scaffoldC05:27270836-27270849:- |
| Species | Brassica Napus | Coordinates | scaffoldC05:27270836..27270849 |
| Microexon Cluster ID | MEP38 |
| Size | 14 |
| Phase | 1 |
| Pfam Domain Motif | Myosin_head |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | CAYTTYARTRMAACTGGRAARATATSTGGTGCYAADATTCAAACWTTTYTRCTTGARAAGTCWAGAGTWGTYCARYKTGCWGAWGGWGARAGRTCATAYCATATWTTT |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TTTTACTAGAAAAG |
| Microexon Amino Acid seq | FLLEK |
| Microexon-tag DNA Seq | CATTTTAGTGAAACAAGGAAGATTTCCGGTGCTAAAATTCAAACATTTTTACTAGAAAAGTCTAGAGTGGTTCAATGTGCGGAAGGAGAGAGGTCATATCACATATTT |
| Microexon-tag Amino Acid Seq | HFSETRKISGAKIQTFLLEKSRVVQCAEGERSYHIF |
| Microexon-tag spanning region | 27270702-27270997 |
| Microexon-tag prediction score | 0.9614 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaC05T0300300ZSx |
| Reference Transcript ID | BnaC05T0300300ZS |
| Gene ID | BnaC05G0300300ZS |
| Gene Name | NA |
| Transcript ID | BnaC05T0300300ZS |
| Protein ID | |
| Gene ID | BnaC05G0300300ZS |
| Gene Name | |
| Pfam domain motif | Myosin_head |
| Motif E-value | 2.00E-246 |
| Motif start | 160 |
| Motif end | 818 |
| Protein seq | >BnaC05T0300300ZS MSEKAKPFVQSLKSMPADYRFLGSSPLEDSSSSGSSVPVTIPRNGHLKNGAVGGVDSANDDSPYGLQSISNGDESSLVDE DPIVPLPESNDRRWSDTSVYARKKALQFWVQLPNGNWELGKVLSTSGSGEESVIKLPEGNVLKVISETLVPANPDILDGV DDLMQLSYLNEPSVLYNLEYRYNQDMIYTKAGPVLVAVNPFKEVPLYGDSNIEAYRKRSNQSPHVYAIADTAIREMIRDE VNQSIIISGESGAGKTETAKIAMQYLASLGGGSGIENEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETRKISGA KIQTFLLEKSRVVQCAEGERSYHIFYQLCAGASPALREKLNLTSAKEYNYLRQSNCYSIKGVDDAERFQAVQEALDIVHV SKDDQESVFAMLAAVLWLGNVSFSIIDNENHAEPESDESLSTVARLIGCNINDLKLALSKRNIKVRNETFVQKLTLSQAI DARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNKNSFEQFCINYANERLQQHFNRHLFKLEQEE YIKDGIDWTRVDFEDNQTCLRLFEKKPLGLLSLLDEESTFPNGTDLTLANKLKEHLSDNSCFRGDRGKTFTVAHYAGEVT YETTGFLEKNRDLLHSDSIKLLSSCSRHLPQAFASSMLVHSEKPVVGPLHKAGGPDSQRLSVATKFKGQLFELMQRLGKT TPHFIRCIKPNSVQSPGLYEQELVLQQLRCCGVLEVVRISRSGFPTRMSHQKFALRYGFLLLESIAAKDPLSVSVAILHQ FNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRLQSCFRGHQARSRLREFKRGITALQSFIRGEKIRKDYTELLR RHRACSAIQSYVKSRIAKRQYKAKVDASLVIQSAIRGELVRRCGGDIKYGGTKRNESGEVLVQASVLSELQRRVLRTEAA LREKEEENDILRQRLQQYDNRWSEYETKMKSMEEIWQKQIRSLQSSLSIAKRSLNVEGSPRYSDASVNASDASDFSVSGD FRTPGRSGSVGLSVISRLAEEFGQRAQVFGDDTKFLMEVKSGKVEANLSPERELRRLKQMFETWKKDYGRRLRETKTILS RLGNEETGGSPLVERVKTKWWGRLRSTRF* |
| CDS seq | >BnaC05T0300300ZS ATGTCTGAGAAGGCTAAGCCATTTGTTCAGTCACTTAAATCGATGCCGGCCGACTATAGATTTCTTGGTTCATCACCCCT TGAAGACTCCTCCTCCTCTGGCTCAAGTGTTCCTGTGACTATCCCACGAAATGGTCACTTAAAGAATGGAGCTGTTGGGG GAGTGGATAGTGCTAATGATGATTCACCCTATGGCCTGCAAAGCATTTCAAATGGAGACGAATCTTCACTTGTTGATGAA GATCCTATTGTTCCCTTGCCTGAGAGTAATGATCGCAGGTGGAGTGACACTAGCGTATATGCTCGGAAAAAGGCACTTCA ATTTTGGGTCCAACTTCCAAACGGTAACTGGGAGCTGGGGAAGGTGTTGTCAACTTCAGGTTCAGGAGAAGAGTCTGTTA TTAAACTGCCTGAGGGCAATGTTTTAAAGGTCATATCAGAGACTCTAGTACCTGCAAATCCTGACATTCTTGATGGAGTG GACGACCTCATGCAACTAAGTTACTTAAATGAGCCATCAGTGTTGTACAACCTTGAGTATAGGTACAACCAAGACATGAT ATATACAAAAGCGGGGCCTGTTTTAGTAGCTGTGAATCCCTTCAAGGAGGTTCCTTTATATGGAGATAGCAACATTGAAG CATACAGGAAAAGATCAAATCAGAGCCCTCATGTCTATGCTATTGCAGATACAGCAATCCGTGAAATGATACGAGATGAA GTTAACCAATCTATCATTATCAGTGGAGAGAGTGGAGCAGGGAAAACTGAGACAGCGAAAATAGCAATGCAATACTTGGC TTCTCTTGGAGGTGGAAGTGGGATCGAGAATGAGATACTAAAGACCAATCCCATCTTGGAAGCATTTGGAAATGCAAAAA CATTGAGAAACGATAACTCTAGTCGTTTTGGGAAACTGATAGAGATTCATTTTAGTGAAACAAGGAAGATTTCCGGTGCT AAAATTCAAACATTTTTACTAGAAAAGTCTAGAGTGGTTCAATGTGCGGAAGGAGAGAGGTCATATCACATATTTTATCA GCTTTGTGCTGGAGCTTCACCTGCGCTTAGAGAGAAGCTAAATTTGACAAGCGCAAAAGAGTATAATTATTTGAGACAGA GCAATTGCTATTCAATTAAAGGAGTTGATGACGCTGAACGTTTTCAAGCTGTTCAAGAAGCTTTAGATATTGTGCACGTT AGTAAAGACGACCAAGAAAGTGTATTTGCAATGCTTGCAGCAGTGTTATGGCTGGGGAATGTCTCATTCTCCATTATTGA CAATGAGAACCACGCTGAACCTGAATCAGATGAAAGTTTATCAACTGTTGCTAGATTGATTGGGTGCAACATCAATGACC TTAAGCTAGCTCTATCAAAGCGTAATATAAAAGTTAGAAATGAAACTTTTGTACAGAAGCTAACACTTTCGCAGGCCATT GATGCAAGAGATGCTTTAGCAAAGTCAATCTATGCCTGCCTATTCGACTGGCTGGTTGAACAGATAAACAAATCTCTTGC CGTGGGAAAGAGGAGAACTGGCAGATCCATCAGCATTCTTGATATCTATGGCTTTGAATCATTCAATAAGAATAGTTTTG AGCAGTTCTGCATAAATTATGCGAATGAGAGATTGCAGCAACACTTTAATCGTCATCTATTCAAGCTTGAGCAGGAGGAA TATATCAAAGATGGGATTGACTGGACAAGGGTTGATTTTGAGGACAACCAAACCTGTCTCAGGCTCTTTGAAAAGAAACC ATTAGGTCTGCTCTCGCTTCTGGATGAGGAATCCACATTTCCGAATGGCACAGATTTGACACTTGCCAACAAGCTTAAGG AACACCTAAGTGATAATTCCTGTTTTAGAGGAGATCGAGGGAAGACCTTCACCGTTGCTCATTATGCTGGAGAGGTTACA TATGAGACAACTGGATTTCTAGAGAAGAACCGGGACTTGCTGCATTCGGATTCTATTAAGCTTTTGTCGTCTTGCTCTCG CCACCTTCCCCAAGCGTTTGCTTCTAGTATGCTCGTCCATTCTGAAAAACCTGTTGTTGGACCTTTACACAAAGCAGGTG GACCTGATTCCCAGCGACTGAGTGTAGCAACTAAATTTAAGGGTCAACTTTTCGAATTGATGCAGCGTTTAGGGAAGACT ACCCCACATTTCATTCGCTGCATAAAGCCAAACAGTGTTCAGTCTCCGGGGTTGTATGAGCAAGAGCTTGTCTTACAGCA GCTACGATGCTGTGGGGTCCTAGAGGTAGTTAGAATTTCTCGGTCTGGGTTTCCTACGAGAATGTCTCACCAAAAGTTTG CCCTAAGGTATGGTTTCCTTCTACTGGAGAGCATTGCAGCAAAAGATCCACTTAGTGTTTCGGTTGCCATTCTTCATCAG TTCAACATCTTGCCAGAGATGTATCAAGTCGGCTACACAAAACTGTTTTTCAGAACTGGCCAGATTGGGGTTCTTGAAGA TACAAGGAACCGCACTCTTCATGGGATTTTACGTCTCCAAAGCTGTTTTAGAGGGCACCAAGCACGAAGTCGTCTAAGAG AGTTTAAAAGAGGAATTACTGCTCTTCAATCTTTTATTCGTGGAGAAAAGATAAGAAAGGACTACACAGAGTTACTACGG AGGCATAGGGCTTGTTCTGCTATACAAAGCTATGTTAAGAGTAGGATTGCTAAGAGACAGTATAAAGCCAAGGTTGATGC ATCTCTTGTAATACAGTCAGCAATTCGTGGCGAGCTGGTTAGAAGATGCGGTGGGGATATTAAATATGGAGGCACCAAGA GAAATGAGTCAGGGGAGGTGCTAGTGCAGGCATCAGTACTTTCCGAACTTCAGCGCAGGGTTCTGAGAACCGAAGCTGCT CTTCGTGAGAAAGAAGAAGAGAACGATATTCTCAGACAAAGACTCCAGCAGTACGACAACAGGTGGTCTGAATACGAAAC AAAGATGAAATCCATGGAAGAAATTTGGCAAAAGCAGATAAGATCTTTGCAATCCAGTCTTTCCATTGCAAAGAGAAGCC TAAATGTGGAGGGTTCACCCAGATACTCGGATGCATCTGTGAACGCTAGCGATGCAAGTGATTTCTCTGTGAGTGGTGAT TTCAGGACCCCCGGGAGAAGTGGAAGTGTTGGTTTAAGCGTGATAAGCCGGTTAGCAGAAGAATTCGGACAAAGAGCTCA GGTGTTTGGAGATGACACAAAGTTCTTGATGGAAGTGAAATCTGGTAAGGTGGAAGCAAACTTGAGTCCGGAAAGGGAGC TGAGGAGGCTGAAGCAGATGTTTGAGACTTGGAAGAAGGATTATGGACGGAGACTAAGGGAAACGAAAACGATACTTAGC AGACTTGGGAATGAAGAAACTGGTGGTTCACCGTTAGTGGAAAGGGTGAAGACGAAGTGGTGGGGGAGGTTAAGGAGTAC CAGGTTTTAA |
Bn_scaffoldC05:27270836-27270849:- does not have available information here.