
Microexon ID | Bn_scaffoldA06:2048649-2048662:- |
Species | Brassica Napus | Coordinates | scaffoldA06:2048649..2048662 |
Microexon Cluster ID | MEP38 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Myosin_head |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CAYTTYARTRMAACTGGRAARATATSTGGTGCYAADATTCAAACWTTTYTRCTTGARAAGTCWAGAGTWGTYCARYKTGCWGAWGGWGARAGRTCATAYCATATWTTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTTGCTAGAAAAG |
Microexon Amino Acid seq | FLLEK |
Microexon-tag DNA Seq | CATTTTAGTGAAACAGGAAAGATTTCTGGTGCTAAAGTCCAAACATTTTTGCTAGAAAAGTCTAGAGTGGTTCAATGTGCGGAAGGAGAAAGGTCATATCATATATTT |
Microexon-tag Amino Acid Seq | HFSETGKISGAKVQTFLLEKSRVVQCAEGERSYHIF |
Microexon-tag spanning region | 2048512-2048809 |
Microexon-tag prediction score | 0.9737 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | BnaA06T0030900ZSx |
Reference Transcript ID | BnaA06T0030900ZS |
Gene ID | BnaA06G0030900ZS |
Gene Name | NA |
Transcript ID | BnaA06T0030900ZS |
Protein ID | |
Gene ID | BnaA06G0030900ZS |
Gene Name | |
Pfam domain motif | Myosin_head |
Motif E-value | 1.70E-246 |
Motif start | 159 |
Motif end | 817 |
Protein seq | >BnaA06T0030900ZS MSQKVKPSVQSLKSMPADYRFLDSPPLEDSSGSSVSVTIPPNGHLKNGFKGTGDSVGGVDNGNEDSPYSVSNGEVSSLVD GDLIVPLPQSTDRRWSDTSVYARKKVLQFWVQLPSGNWELGKVLSTSGEESVVKLPEGNVLKVISETLVPANPDILDGVD DLMQLSYLNEPAVLYNLEYRYNQDMIYTKAGPVLVAVNPFKEVPLYGNSNIEAYRKRSNESPHVYAIADTAIREMIRDEV NQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGAK VQTFLLEKSRVVQCAEGERSYHIFYQLCAGASPTLREKLNLTSAEEYKYLQQSNCYSINGVDDAERFQAVTEALDIVHVS KEDQESVFAMLAAVLWLGNVSFTAIDNENHVEPEEDESLSTVAKLIGCNINELKLALSNRNMKVRNDTIIQKLTLSQAID ARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFDKNSFEQFCINYANERLQQHFNRHLFKLEQEEY IQDGIDWTRVDFEDNQNCLSLFEKKPLGLLSLLDEESTFPNGTDLTLANKLKEHLSANSCFRGDRGKAFTVSHYAGEVTY ETTGFLEKNRDLLHSDSIKLLSSCSCHLPQAFASSMLIHSEKPVVGPLYKAGGADSQRLSVATKFKDQLFQLMQRLGNTT PHFIRCIKPNNVQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESIAAKDPLSVSVAILHQF NILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRLQSCFRGHQARSRLREHKRRVTVLQSFVRGEKVRKEYTELLRR HRASAAIQSHVKRRIAKRQYKATVDASVVIQSAIRGELVRRCAGDIGWLKSGGTKRNESDEVLVKASVLSELQRRVLKSE AALREKEEENDILRQRLQQYDNRWSEYETKMKSMEEIWQKQMRSLQSSLSIAKKSLEVEDSARNSDASVNASDATELSGS GGDFRTHGRTRSVGVGLSVISRLAEEFGQRAQVFGDDTKFLMEVKSGQVEANLDPERELRRLKQMFDTWKKDYGGRLRET KLILGKLGSEGGGGSAERVKMKWWGRLKSTRF* |
CDS seq | >BnaA06T0030900ZS ATGTCCCAGAAGGTTAAGCCATCTGTTCAGTCACTTAAATCGATGCCGGCGGATTATAGATTCCTTGATTCACCACCCCT TGAGGACTCCTCTGGATCAAGTGTTTCTGTGACCATTCCACCAAATGGTCACTTGAAGAATGGGTTCAAGGGAACTGGAG ATTCTGTTGGGGGAGTGGATAATGGTAATGAGGATTCACCGTACAGCGTTTCAAATGGGGAGGTGTCTTCACTTGTTGAT GGAGATCTTATCGTGCCCTTGCCTCAGAGTACGGACCGCAGGTGGAGCGACACAAGCGTATATGCTCGGAAGAAGGTATT GCAATTTTGGGTCCAACTTCCAAGTGGTAACTGGGAGCTGGGGAAGGTGTTGTCAACTTCAGGAGAAGAGTCTGTTGTTA AACTACCTGAGGGAAATGTGTTAAAAGTCATATCAGAGACACTAGTACCTGCAAATCCTGATATACTTGATGGAGTAGAT GATCTCATGCAACTAAGTTACTTAAATGAACCAGCAGTGTTGTACAACCTTGAGTATAGGTACAACCAAGACATGATCTA TACCAAAGCAGGCCCGGTTCTAGTGGCTGTGAATCCATTCAAAGAGGTTCCTTTGTATGGAAATAGCAACATCGAAGCAT ACAGGAAAAGATCAAATGAGAGCCCTCATGTCTACGCTATTGCAGATACAGCAATCCGTGAAATGATAAGAGATGAAGTT AACCAATCCATCATTATAAGTGGAGAGAGTGGAGCAGGGAAAACTGAGACAGCAAAGATAGCAATGCAATACTTGGCTGC TCTTGGAGGTGGAAGTGGGATCGAGTATGAGATATTAAAGACTAATCCCATCTTGGAAGCATTTGGAAATGCAAAAACAT TGAGAAACGATAATTCTAGTCGTTTTGGGAAGCTGATAGAGATTCATTTTAGTGAAACAGGAAAGATTTCTGGTGCTAAA GTCCAAACATTTTTGCTAGAAAAGTCTAGAGTGGTTCAATGTGCGGAAGGAGAAAGGTCATATCATATATTTTACCAGCT TTGTGCTGGGGCTTCACCTACTCTTAGAGAGAAGCTAAATTTGACAAGCGCAGAAGAGTATAAATATTTGCAACAAAGCA ATTGTTATTCAATTAACGGAGTTGATGACGCTGAACGTTTTCAAGCTGTCACGGAAGCTCTAGACATTGTGCACGTTAGT AAAGAAGATCAAGAAAGCGTATTTGCAATGCTTGCAGCAGTACTATGGCTAGGGAATGTTTCTTTCACCGCTATTGACAA TGAAAACCACGTTGAACCTGAGGAAGATGAAAGTTTGTCAACTGTTGCTAAATTGATTGGGTGCAACATCAATGAGCTAA AGCTAGCTCTATCGAATCGTAATATGAAAGTTAGAAATGACACAATTATACAGAAGCTAACACTATCGCAGGCCATTGAC GCAAGAGATGCTTTAGCAAAGTCAATATATGCCTGCCTATTTGACTGGCTGGTTGAACAGATAAACAAATCTCTTGCGGT GGGAAAAAGGAGGACTGGCAGATCCATCAGCATTCTGGATATCTATGGCTTTGAATCATTTGATAAGAACAGTTTTGAAC AGTTCTGTATAAATTATGCAAATGAGAGATTGCAGCAACACTTTAATCGTCATCTATTCAAGCTGGAGCAGGAGGAATAT ATACAGGATGGCATTGACTGGACAAGGGTTGATTTTGAGGACAACCAAAATTGTCTCAGTCTCTTTGAAAAGAAACCATT AGGTCTGCTCTCGCTTCTTGATGAGGAATCAACATTTCCGAATGGCACAGATCTGACACTTGCCAACAAGCTTAAGGAAC ACCTAAGTGCTAATTCCTGTTTTAGAGGAGATCGAGGGAAGGCTTTTACGGTTTCTCATTATGCTGGAGAGGTTACATAT GAGACGACTGGATTTCTAGAGAAGAACCGGGATTTGCTGCATTCAGATTCTATTAAGCTTTTGTCATCTTGCTCTTGCCA CCTTCCACAAGCCTTCGCTTCTAGCATGCTCATTCATTCTGAAAAGCCTGTTGTTGGTCCTTTATACAAAGCAGGTGGAG CTGACTCCCAGCGACTGAGTGTAGCAACTAAATTTAAGGATCAACTTTTCCAATTGATGCAACGTCTAGGGAACACGACA CCACATTTCATTCGCTGCATAAAGCCAAACAATGTTCAGTCTCCGGGGTTGTATGAGCAAGGTCTTGTCTTACAGCAGCT AAGATGTTGTGGGGTTCTAGAGGTGGTTAGAATCTCCCGGTCTGGATTTCCTACCAGAATGTCTCATCAGAAATTTGCTA GAAGGTATGGTTTCCTTCTGCTGGAGAGCATTGCAGCAAAAGATCCTCTTAGTGTTTCTGTTGCAATTCTTCATCAGTTC AACATCTTGCCAGAGATGTATCAAGTCGGCTACACAAAACTGTTTTTCAGAACTGGCCAGATTGGGGTTCTTGAAGATAC AAGGAACCGCACTCTTCATGGGATCTTACGTCTCCAAAGCTGTTTTAGAGGGCACCAAGCACGGAGTCGTCTAAGAGAGC ATAAAAGAAGAGTTACTGTTCTTCAGTCATTTGTTCGTGGAGAAAAGGTAAGAAAGGAATACACAGAGTTACTTCGGAGG CATAGAGCTTCTGCTGCTATACAAAGCCATGTTAAGAGAAGGATTGCTAAGAGACAGTATAAAGCTACAGTTGATGCATC TGTTGTAATACAGTCAGCAATTCGTGGCGAGCTGGTTAGAAGATGTGCTGGGGATATTGGTTGGCTAAAATCTGGAGGCA CCAAGAGAAATGAGTCAGACGAGGTGCTGGTGAAGGCATCAGTACTTTCAGAACTTCAGCGCAGGGTTCTGAAAAGCGAA GCTGCACTTCGTGAGAAAGAAGAAGAGAACGACATTCTCCGACAAAGACTCCAGCAGTACGACAACAGGTGGTCTGAATA CGAAACCAAGATGAAGTCAATGGAAGAGATTTGGCAAAAGCAAATGAGATCATTGCAGTCCAGTCTTTCCATTGCCAAGA AAAGCCTAGAGGTTGAGGACTCAGCGAGAAACTCTGATGCGTCGGTGAACGCAAGCGACGCAACGGAGTTATCAGGAAGC GGCGGTGATTTCAGGACTCATGGGAGGACAAGAAGTGTTGGTGTGGGGTTAAGCGTGATAAGCAGGTTAGCAGAGGAGTT CGGACAGAGAGCTCAGGTGTTTGGTGATGACACAAAGTTCTTGATGGAAGTGAAGTCTGGTCAGGTGGAGGCGAACTTGG ATCCGGAGAGGGAGCTAAGAAGGTTGAAACAGATGTTTGACACGTGGAAGAAGGATTATGGAGGGAGGCTAAGGGAAACG AAACTGATACTTGGCAAGCTTGGGAGTGAAGGAGGTGGTGGTTCAGCGGAGAGAGTGAAGATGAAGTGGTGGGGGAGGTT GAAGAGTACCAGGTTTTAA |
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